EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000016022 (Gene tree)
Gene ID: 103466414
Gene Symbol: edc3
Alias: im:7151288|lsm16|wu:fb82d07|yjdc|zgc:112006
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 4860 bases
Position: chrLG6:27508878-27513737
Accession: 103466414
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000023739	FDF	PF09532.10	1.6e-12	1	1
ENSPREP00000023739	LSM14	PF12701.7	4.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000023980	-	1437	XM_008411953	ENSPREP00000023739	478 (aa)	XP_008410175	UPI0004A23703

Gene Model

Click here to download ENSPREG00000016022's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000016022's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000016022	edc3	100	68.872	ENSG00000179151	EDC3	100	79.630	Homo_sapiens
ENSPREG00000016022	edc3	100	91.841	ENSAPOG00000010791	edc3	100	91.841	Acanthochromis_polyacanthus
ENSPREG00000016022	edc3	100	59.717	ENSAPOG00000008655	EDC3	100	59.717	Acanthochromis_polyacanthus
ENSPREG00000016022	edc3	100	68.959	ENSAMEG00000008963	EDC3	100	68.959	Ailuropoda_melanoleuca
ENSPREG00000016022	edc3	100	63.762	ENSACIG00000005330	EDC3	100	64.329	Amphilophus_citrinellus
ENSPREG00000016022	edc3	100	89.749	ENSACIG00000017751	edc3	100	89.749	Amphilophus_citrinellus
ENSPREG00000016022	edc3	100	65.496	ENSAOCG00000009103	-	100	65.496	Amphiprion_ocellaris
ENSPREG00000016022	edc3	100	92.050	ENSAOCG00000005431	edc3	100	92.050	Amphiprion_ocellaris
ENSPREG00000016022	edc3	100	65.496	ENSAPEG00000007841	EDC3	100	65.496	Amphiprion_percula
ENSPREG00000016022	edc3	100	92.050	ENSAPEG00000000968	edc3	100	92.050	Amphiprion_percula
ENSPREG00000016022	edc3	100	91.213	ENSATEG00000015505	edc3	100	91.213	Anabas_testudineus
ENSPREG00000016022	edc3	100	66.942	ENSATEG00000004205	-	100	66.942	Anabas_testudineus
ENSPREG00000016022	edc3	89	67.841	ENSAPLG00000008957	EDC3	100	67.841	Anas_platyrhynchos
ENSPREG00000016022	edc3	77	67.172	ENSACAG00000000460	-	100	67.172	Anolis_carolinensis
ENSPREG00000016022	edc3	100	69.352	ENSANAG00000024078	EDC3	100	69.352	Aotus_nancymaae
ENSPREG00000016022	edc3	100	89.540	ENSACLG00000007232	edc3	100	89.540	Astatotilapia_calliptera
ENSPREG00000016022	edc3	100	64.938	ENSACLG00000018776	-	100	64.938	Astatotilapia_calliptera
ENSPREG00000016022	edc3	100	79.563	ENSAMXG00000001589	edc3	100	79.563	Astyanax_mexicanus
ENSPREG00000016022	edc3	100	69.352	ENSBTAG00000007308	EDC3	100	69.352	Bos_taurus
ENSPREG00000016022	edc3	100	69.352	ENSCJAG00000017681	EDC3	100	69.352	Callithrix_jacchus
ENSPREG00000016022	edc3	100	68.959	ENSCAFG00000017935	EDC3	100	68.959	Canis_familiaris
ENSPREG00000016022	edc3	100	68.959	ENSCAFG00020003909	EDC3	100	68.959	Canis_lupus_dingo
ENSPREG00000016022	edc3	100	69.548	ENSCHIG00000023658	EDC3	100	69.548	Capra_hircus
ENSPREG00000016022	edc3	100	69.548	ENSTSYG00000004822	EDC3	100	69.548	Carlito_syrichta
ENSPREG00000016022	edc3	100	69.352	ENSCPOG00000015595	EDC3	100	69.352	Cavia_porcellus
ENSPREG00000016022	edc3	100	69.155	ENSCCAG00000021663	EDC3	100	69.155	Cebus_capucinus
ENSPREG00000016022	edc3	100	69.352	ENSCATG00000037511	EDC3	100	69.352	Cercocebus_atys
ENSPREG00000016022	edc3	100	69.352	ENSCLAG00000005700	EDC3	100	69.352	Chinchilla_lanigera
ENSPREG00000016022	edc3	100	69.352	ENSCSAG00000014239	EDC3	100	69.352	Chlorocebus_sabaeus
ENSPREG00000016022	edc3	100	68.959	ENSCPBG00000024239	EDC3	100	68.959	Chrysemys_picta_bellii
ENSPREG00000016022	edc3	100	37.598	ENSCING00000022142	-	99	37.598	Ciona_intestinalis
ENSPREG00000016022	edc3	100	69.352	ENSCANG00000028699	EDC3	100	69.352	Colobus_angolensis_palliatus
ENSPREG00000016022	edc3	100	69.352	ENSCGRG00001013874	Edc3	100	69.352	Cricetulus_griseus_chok1gshd
ENSPREG00000016022	edc3	100	69.352	ENSCGRG00000011885	Edc3	100	69.352	Cricetulus_griseus_crigri
ENSPREG00000016022	edc3	99	90.147	ENSCSEG00000012996	edc3	99	90.147	Cynoglossus_semilaevis
ENSPREG00000016022	edc3	100	95.607	ENSCVAG00000008023	edc3	100	95.607	Cyprinodon_variegatus
ENSPREG00000016022	edc3	99	75.842	ENSDARG00000051931	edc3	99	75.842	Danio_rerio
ENSPREG00000016022	edc3	100	60.853	ENSDNOG00000030661	EDC3	100	60.853	Dasypus_novemcinctus
ENSPREG00000016022	edc3	68	79.630	ENSETEG00000002398	-	64	79.630	Echinops_telfairi
ENSPREG00000016022	edc3	100	68.566	ENSEASG00005005071	EDC3	100	68.566	Equus_asinus_asinus
ENSPREG00000016022	edc3	100	68.566	ENSECAG00000017994	EDC3	100	68.566	Equus_caballus
ENSPREG00000016022	edc3	100	70.833	ENSELUG00000007607	EDC3	100	70.833	Esox_lucius
ENSPREG00000016022	edc3	100	80.579	ENSELUG00000005794	edc3	100	80.579	Esox_lucius
ENSPREG00000016022	edc3	100	69.155	ENSFCAG00000002014	EDC3	100	69.155	Felis_catus
ENSPREG00000016022	edc3	98	68.072	ENSFALG00000004543	EDC3	96	68.072	Ficedula_albicollis
ENSPREG00000016022	edc3	100	69.548	ENSFDAG00000012582	EDC3	100	69.548	Fukomys_damarensis
ENSPREG00000016022	edc3	100	95.397	ENSFHEG00000009375	edc3	100	95.397	Fundulus_heteroclitus
ENSPREG00000016022	edc3	100	85.239	ENSGMOG00000002715	edc3	100	85.239	Gadus_morhua
ENSPREG00000016022	edc3	100	68.836	ENSGALG00000040181	EDC3	100	68.836	Gallus_gallus
ENSPREG00000016022	edc3	100	97.071	ENSGAFG00000014433	edc3	100	97.071	Gambusia_affinis
ENSPREG00000016022	edc3	99	60.274	ENSGACG00000014671	EDC3	99	60.274	Gasterosteus_aculeatus
ENSPREG00000016022	edc3	100	88.703	ENSGACG00000009783	edc3	100	88.703	Gasterosteus_aculeatus
ENSPREG00000016022	edc3	100	69.034	ENSGAGG00000023477	EDC3	100	69.034	Gopherus_agassizii
ENSPREG00000016022	edc3	100	69.155	ENSGGOG00000003552	EDC3	100	69.155	Gorilla_gorilla
ENSPREG00000016022	edc3	100	65.145	ENSHBUG00000020817	EDC3	100	65.145	Haplochromis_burtoni
ENSPREG00000016022	edc3	100	89.540	ENSHBUG00000003635	edc3	100	89.540	Haplochromis_burtoni
ENSPREG00000016022	edc3	100	87.500	ENSHCOG00000016834	edc3	100	87.500	Hippocampus_comes
ENSPREG00000016022	edc3	99	78.514	ENSIPUG00000005695	edc3	100	78.514	Ictalurus_punctatus
ENSPREG00000016022	edc3	100	69.352	ENSSTOG00000013936	EDC3	100	69.352	Ictidomys_tridecemlineatus
ENSPREG00000016022	edc3	100	68.959	ENSJJAG00000008074	Edc3	100	69.155	Jaculus_jaculus
ENSPREG00000016022	edc3	100	63.278	ENSKMAG00000001987	EDC3	100	63.278	Kryptolebias_marmoratus
ENSPREG00000016022	edc3	100	92.484	ENSKMAG00000001243	edc3	100	92.693	Kryptolebias_marmoratus
ENSPREG00000016022	edc3	100	64.082	ENSLBEG00000017984	EDC3	100	64.082	Labrus_bergylta
ENSPREG00000016022	edc3	100	90.377	ENSLBEG00000013435	edc3	99	90.377	Labrus_bergylta
ENSPREG00000016022	edc3	100	70.428	ENSLACG00000014149	EDC3	100	70.428	Latimeria_chalumnae
ENSPREG00000016022	edc3	99	73.684	ENSLOCG00000014625	edc3	99	73.939	Lepisosteus_oculatus
ENSPREG00000016022	edc3	100	69.291	ENSLAFG00000002992	EDC3	100	69.291	Loxodonta_africana
ENSPREG00000016022	edc3	100	69.352	ENSMFAG00000043074	EDC3	100	69.352	Macaca_fascicularis
ENSPREG00000016022	edc3	100	69.352	ENSMMUG00000011071	EDC3	100	69.352	Macaca_mulatta
ENSPREG00000016022	edc3	100	69.352	ENSMNEG00000035316	EDC3	100	69.352	Macaca_nemestrina
ENSPREG00000016022	edc3	100	69.352	ENSMLEG00000030372	EDC3	100	69.352	Mandrillus_leucophaeus
ENSPREG00000016022	edc3	100	91.004	ENSMAMG00000000505	edc3	100	91.004	Mastacembelus_armatus
ENSPREG00000016022	edc3	99	65.489	ENSMAMG00000005423	-	99	65.489	Mastacembelus_armatus
ENSPREG00000016022	edc3	100	64.887	ENSMZEG00005005654	EDC3	100	64.887	Maylandia_zebra
ENSPREG00000016022	edc3	100	89.331	ENSMZEG00005004892	edc3	100	89.331	Maylandia_zebra
ENSPREG00000016022	edc3	100	68.836	ENSMGAG00000002617	EDC3	100	68.836	Meleagris_gallopavo
ENSPREG00000016022	edc3	100	69.352	ENSMICG00000043190	EDC3	100	69.352	Microcebus_murinus
ENSPREG00000016022	edc3	100	68.959	ENSMOCG00000016205	Edc3	100	68.959	Microtus_ochrogaster
ENSPREG00000016022	edc3	99	90.985	ENSMMOG00000012278	edc3	99	90.985	Mola_mola
ENSPREG00000016022	edc3	100	69.352	ENSMODG00000009442	EDC3	100	69.352	Monodelphis_domestica
ENSPREG00000016022	edc3	100	90.167	ENSMALG00000008658	edc3	100	90.167	Monopterus_albus
ENSPREG00000016022	edc3	100	69.155	MGP_CAROLIEiJ_G0032280	Edc3	100	78.462	Mus_caroli
ENSPREG00000016022	edc3	100	68.959	ENSMUSG00000038957	Edc3	100	78.462	Mus_musculus
ENSPREG00000016022	edc3	100	68.959	MGP_PahariEiJ_G0015146	Edc3	100	78.462	Mus_pahari
ENSPREG00000016022	edc3	100	68.959	MGP_SPRETEiJ_G0033420	Edc3	100	78.462	Mus_spretus
ENSPREG00000016022	edc3	100	69.155	ENSMPUG00000017293	EDC3	100	69.155	Mustela_putorius_furo
ENSPREG00000016022	edc3	100	69.276	ENSMLUG00000016382	EDC3	100	69.276	Myotis_lucifugus
ENSPREG00000016022	edc3	100	69.352	ENSNGAG00000010923	Edc3	100	69.352	Nannospalax_galili
ENSPREG00000016022	edc3	100	89.331	ENSNBRG00000002434	edc3	100	89.331	Neolamprologus_brichardi
ENSPREG00000016022	edc3	100	65.424	ENSNBRG00000007881	EDC3	100	65.424	Neolamprologus_brichardi
ENSPREG00000016022	edc3	100	60.118	ENSNLEG00000014577	EDC3	100	60.118	Nomascus_leucogenys
ENSPREG00000016022	edc3	100	69.034	ENSMEUG00000009077	EDC3	100	69.034	Notamacropus_eugenii
ENSPREG00000016022	edc3	84	79.630	ENSOPRG00000009540	-	79	79.630	Ochotona_princeps
ENSPREG00000016022	edc3	100	61.822	ENSONIG00000002932	-	100	61.822	Oreochromis_niloticus
ENSPREG00000016022	edc3	100	89.749	ENSONIG00000008434	edc3	100	89.749	Oreochromis_niloticus
ENSPREG00000016022	edc3	77	65.743	ENSOCUG00000017740	EDC3	86	65.743	Oryctolagus_cuniculus
ENSPREG00000016022	edc3	100	63.278	ENSORLG00000014399	-	98	63.278	Oryzias_latipes
ENSPREG00000016022	edc3	100	87.474	ENSORLG00000004883	edc3	100	87.474	Oryzias_latipes
ENSPREG00000016022	edc3	100	87.891	ENSORLG00020012262	edc3	100	87.891	Oryzias_latipes_hni
ENSPREG00000016022	edc3	100	63.278	ENSORLG00020019446	-	100	63.278	Oryzias_latipes_hni
ENSPREG00000016022	edc3	100	63.278	ENSORLG00015017635	-	96	63.278	Oryzias_latipes_hsok
ENSPREG00000016022	edc3	100	88.100	ENSORLG00015005634	edc3	100	88.100	Oryzias_latipes_hsok
ENSPREG00000016022	edc3	100	63.071	ENSOMEG00000017354	EDC3	100	63.071	Oryzias_melastigma
ENSPREG00000016022	edc3	100	88.703	ENSOMEG00000014026	edc3	100	88.703	Oryzias_melastigma
ENSPREG00000016022	edc3	100	68.762	ENSOGAG00000014441	EDC3	100	69.155	Otolemur_garnettii
ENSPREG00000016022	edc3	100	68.824	ENSOARG00000003476	EDC3	100	69.216	Ovis_aries
ENSPREG00000016022	edc3	100	69.155	ENSPPAG00000040143	EDC3	100	69.155	Pan_paniscus
ENSPREG00000016022	edc3	100	69.155	ENSPPRG00000006257	EDC3	100	69.155	Panthera_pardus
ENSPREG00000016022	edc3	100	69.155	ENSPTIG00000017424	EDC3	100	69.155	Panthera_tigris_altaica
ENSPREG00000016022	edc3	100	69.155	ENSPTRG00000007279	EDC3	100	69.155	Pan_troglodytes
ENSPREG00000016022	edc3	100	69.352	ENSPANG00000015997	EDC3	100	69.352	Papio_anubis
ENSPREG00000016022	edc3	100	74.704	ENSPKIG00000004416	edc3	100	74.704	Paramormyrops_kingsleyae
ENSPREG00000016022	edc3	100	76.364	ENSPKIG00000019810	EDC3	100	76.364	Paramormyrops_kingsleyae
ENSPREG00000016022	edc3	100	65.029	ENSPSIG00000008474	EDC3	100	65.422	Pelodiscus_sinensis
ENSPREG00000016022	edc3	100	87.292	ENSPMGG00000007223	edc3	100	87.292	Periophthalmus_magnuspinnatus
ENSPREG00000016022	edc3	100	69.352	ENSPEMG00000015260	Edc3	100	69.352	Peromyscus_maniculatus_bairdii
ENSPREG00000016022	edc3	99	69.170	ENSPCIG00000006276	EDC3	70	68.972	Phascolarctos_cinereus
ENSPREG00000016022	edc3	100	99.163	ENSPFOG00000012204	edc3	100	99.163	Poecilia_formosa
ENSPREG00000016022	edc3	100	99.163	ENSPLAG00000014420	edc3	100	99.163	Poecilia_latipinna
ENSPREG00000016022	edc3	100	99.163	ENSPMEG00000023289	edc3	100	99.163	Poecilia_mexicana
ENSPREG00000016022	edc3	100	68.369	ENSPPYG00000006642	EDC3	100	68.369	Pongo_abelii
ENSPREG00000016022	edc3	93	79.630	ENSPCAG00000002802	EDC3	88	79.630	Procavia_capensis
ENSPREG00000016022	edc3	100	69.548	ENSPCOG00000013364	EDC3	100	69.548	Propithecus_coquereli
ENSPREG00000016022	edc3	100	68.959	ENSPVAG00000014733	EDC3	100	69.352	Pteropus_vampyrus
ENSPREG00000016022	edc3	100	65.145	ENSPNYG00000009669	EDC3	100	65.145	Pundamilia_nyererei
ENSPREG00000016022	edc3	100	89.540	ENSPNYG00000021797	edc3	100	89.540	Pundamilia_nyererei
ENSPREG00000016022	edc3	100	78.968	ENSPNAG00000019657	edc3	100	78.968	Pygocentrus_nattereri
ENSPREG00000016022	edc3	99	69.368	ENSRNOG00000019579	Edc3	99	69.368	Rattus_norvegicus
ENSPREG00000016022	edc3	100	69.352	ENSRBIG00000019488	EDC3	100	69.352	Rhinopithecus_bieti
ENSPREG00000016022	edc3	100	69.352	ENSRROG00000034959	EDC3	100	69.352	Rhinopithecus_roxellana
ENSPREG00000016022	edc3	100	69.155	ENSSBOG00000004896	EDC3	100	69.155	Saimiri_boliviensis_boliviensis
ENSPREG00000016022	edc3	96	68.443	ENSSHAG00000015075	EDC3	95	68.443	Sarcophilus_harrisii
ENSPREG00000016022	edc3	100	72.671	ENSSFOG00015002439	edc3	100	72.878	Scleropages_formosus
ENSPREG00000016022	edc3	100	78.728	ENSSFOG00015016939	edc3	100	78.728	Scleropages_formosus
ENSPREG00000016022	edc3	99	65.631	ENSSMAG00000010176	-	99	65.631	Scophthalmus_maximus
ENSPREG00000016022	edc3	100	90.586	ENSSMAG00000010695	edc3	100	90.586	Scophthalmus_maximus
ENSPREG00000016022	edc3	100	91.841	ENSSDUG00000021844	edc3	100	91.841	Seriola_dumerili
ENSPREG00000016022	edc3	100	68.182	ENSSDUG00000007671	EDC3	100	68.182	Seriola_dumerili
ENSPREG00000016022	edc3	100	92.050	ENSSLDG00000022046	edc3	100	92.050	Seriola_lalandi_dorsalis
ENSPREG00000016022	edc3	79	78.629	ENSSARG00000003907	EDC3	80	78.629	Sorex_araneus
ENSPREG00000016022	edc3	100	67.780	ENSSPUG00000008232	EDC3	100	67.780	Sphenodon_punctatus
ENSPREG00000016022	edc3	100	65.424	ENSSPAG00000020327	EDC3	100	65.839	Stegastes_partitus
ENSPREG00000016022	edc3	100	91.632	ENSSPAG00000010009	edc3	100	91.632	Stegastes_partitus
ENSPREG00000016022	edc3	100	71.967	ENSSSCG00000001903	EDC3	100	71.967	Sus_scrofa
ENSPREG00000016022	edc3	100	69.428	ENSTGUG00000004007	EDC3	100	69.428	Taeniopygia_guttata
ENSPREG00000016022	edc3	100	88.494	ENSTRUG00000017078	edc3	100	88.494	Takifugu_rubripes
ENSPREG00000016022	edc3	100	87.708	ENSTNIG00000016047	edc3	100	87.708	Tetraodon_nigroviridis
ENSPREG00000016022	edc3	100	69.488	ENSTTRG00000007990	EDC3	100	69.488	Tursiops_truncatus
ENSPREG00000016022	edc3	100	68.959	ENSUAMG00000026710	-	100	68.959	Ursus_americanus
ENSPREG00000016022	edc3	100	68.959	ENSUMAG00000005006	EDC3	96	68.959	Ursus_maritimus
ENSPREG00000016022	edc3	84	70.370	ENSVPAG00000003499	-	79	70.370	Vicugna_pacos
ENSPREG00000016022	edc3	100	68.959	ENSVVUG00000018601	EDC3	100	68.959	Vulpes_vulpes
ENSPREG00000016022	edc3	72	74.212	ENSXETG00000010622	edc3	99	75.645	Xenopus_tropicalis
ENSPREG00000016022	edc3	100	98.117	ENSXMAG00000007377	edc3	100	98.117	Xiphophorus_maculatus