EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000016098 (Gene tree)
Gene ID: 103476836
Gene Symbol: sar1ab
Alias: fd13d02|sar1a|wu:fd13d02|zgc:110650
Full Name: GTP-binding protein SAR1b
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 4008 bases
Position: chrLG15:15215616-15219623
Accession: 103476836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000023849	MMR_HSR1	PF01926.23	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000024091	-	2392	XM_008429491	ENSPREP00000023849	198 (aa)	XP_008427713	UPI000443ACF5

Gene Model

Click here to download ENSPREG00000016098's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000016098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000016098	sar1ab	72	34.266	ENSPREG00000020988	-	78	34.266
ENSPREG00000016098	sar1ab	94	30.319	ENSPREG00000007723	-	96	30.319
ENSPREG00000016098	sar1ab	94	31.579	ENSPREG00000014738	-	96	31.579
ENSPREG00000016098	sar1ab	96	30.890	ENSPREG00000009009	-	97	31.383
ENSPREG00000016098	sar1ab	60	81.356	ENSPREG00000002020	-	87	81.356
ENSPREG00000016098	sar1ab	73	32.886	ENSPREG00000015645	arl4cb	74	32.886
ENSPREG00000016098	sar1ab	64	35.938	ENSPREG00000004191	arl8ba	69	35.938
ENSPREG00000016098	sar1ab	100	81.313	ENSPREG00000005312	sar1b	90	81.313
ENSPREG00000016098	sar1ab	71	30.556	ENSPREG00000001976	arl14	72	30.556
ENSPREG00000016098	sar1ab	78	32.903	ENSPREG00000000912	-	86	32.903
ENSPREG00000016098	sar1ab	94	30.688	ENSPREG00000008632	arf2b	96	30.688
ENSPREG00000016098	sar1ab	65	36.296	ENSPREG00000001895	-	65	36.296
ENSPREG00000016098	sar1ab	71	36.429	ENSPREG00000020490	arl2	76	36.429
ENSPREG00000016098	sar1ab	64	35.938	ENSPREG00000004992	arl8a	68	35.938
ENSPREG00000016098	sar1ab	88	32.402	ENSPREG00000013042	-	89	30.000
ENSPREG00000016098	sar1ab	72	34.266	ENSPREG00000012688	arf3b	78	34.266
ENSPREG00000016098	sar1ab	60	36.800	ENSPREG00000021699	-	65	36.800
ENSPREG00000016098	sar1ab	86	32.955	ENSPREG00000011615	arl4d	82	32.955
ENSPREG00000016098	sar1ab	78	30.247	ENSPREG00000003821	arl3	65	30.247

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000016098	sar1ab	100	94.444	ENSACIG00000019827	sar1ab	100	94.444	Amphilophus_citrinellus
ENSPREG00000016098	sar1ab	100	93.939	ENSAOCG00000022062	sar1ab	100	93.939	Amphiprion_ocellaris
ENSPREG00000016098	sar1ab	100	93.939	ENSAPEG00000011525	sar1ab	100	93.939	Amphiprion_percula
ENSPREG00000016098	sar1ab	100	92.424	ENSATEG00000003466	sar1ab	100	92.424	Anabas_testudineus
ENSPREG00000016098	sar1ab	100	91.919	ENSACLG00000013053	sar1ab	100	91.919	Astatotilapia_calliptera
ENSPREG00000016098	sar1ab	100	90.404	ENSCSEG00000004825	sar1ab	100	90.404	Cynoglossus_semilaevis
ENSPREG00000016098	sar1ab	100	96.970	ENSCVAG00000015162	sar1ab	100	96.970	Cyprinodon_variegatus
ENSPREG00000016098	sar1ab	100	79.798	ENSCVAG00000006500	-	100	79.798	Cyprinodon_variegatus
ENSPREG00000016098	sar1ab	100	87.374	ENSDARG00000033320	sar1ab	100	87.374	Danio_rerio
ENSPREG00000016098	sar1ab	100	90.909	ENSELUG00000024279	sar1ab	100	90.909	Esox_lucius
ENSPREG00000016098	sar1ab	100	82.828	ENSELUG00000013652	sar1a	100	82.828	Esox_lucius
ENSPREG00000016098	sar1ab	100	80.303	ENSFHEG00000012352	-	100	80.303	Fundulus_heteroclitus
ENSPREG00000016098	sar1ab	100	95.960	ENSFHEG00000021773	sar1ab	100	95.960	Fundulus_heteroclitus
ENSPREG00000016098	sar1ab	100	89.394	ENSGMOG00000012588	sar1ab	100	89.394	Gadus_morhua
ENSPREG00000016098	sar1ab	100	97.980	ENSGAFG00000009702	sar1ab	100	97.980	Gambusia_affinis
ENSPREG00000016098	sar1ab	100	80.303	ENSGAFG00000004846	-	100	80.303	Gambusia_affinis
ENSPREG00000016098	sar1ab	100	92.424	ENSGACG00000008616	sar1ab	100	92.424	Gasterosteus_aculeatus
ENSPREG00000016098	sar1ab	100	91.919	ENSHBUG00000021221	sar1ab	100	91.919	Haplochromis_burtoni
ENSPREG00000016098	sar1ab	100	89.899	ENSHCOG00000002845	sar1ab	80	89.899	Hippocampus_comes
ENSPREG00000016098	sar1ab	100	96.970	ENSKMAG00000018006	sar1ab	100	96.970	Kryptolebias_marmoratus
ENSPREG00000016098	sar1ab	100	91.919	ENSLBEG00000001114	sar1ab	100	91.919	Labrus_bergylta
ENSPREG00000016098	sar1ab	100	92.424	ENSMAMG00000021314	sar1ab	100	92.424	Mastacembelus_armatus
ENSPREG00000016098	sar1ab	100	91.919	ENSMZEG00005027606	sar1ab	100	91.919	Maylandia_zebra
ENSPREG00000016098	sar1ab	100	92.929	ENSMMOG00000010360	sar1ab	100	92.929	Mola_mola
ENSPREG00000016098	sar1ab	100	90.909	ENSMALG00000005831	sar1ab	100	90.909	Monopterus_albus
ENSPREG00000016098	sar1ab	100	92.424	ENSNBRG00000018772	sar1ab	100	92.424	Neolamprologus_brichardi
ENSPREG00000016098	sar1ab	100	93.434	ENSONIG00000018509	sar1ab	100	93.434	Oreochromis_niloticus
ENSPREG00000016098	sar1ab	100	81.313	ENSORLG00000009132	-	90	81.313	Oryzias_latipes
ENSPREG00000016098	sar1ab	100	92.424	ENSORLG00000006779	sar1ab	67	92.424	Oryzias_latipes
ENSPREG00000016098	sar1ab	100	81.313	ENSORLG00020007024	-	90	81.313	Oryzias_latipes_hni
ENSPREG00000016098	sar1ab	100	91.919	ENSORLG00020005458	sar1ab	100	91.919	Oryzias_latipes_hni
ENSPREG00000016098	sar1ab	100	80.808	ENSORLG00015006223	-	94	84.821	Oryzias_latipes_hsok
ENSPREG00000016098	sar1ab	100	92.424	ENSORLG00015010542	sar1ab	100	92.424	Oryzias_latipes_hsok
ENSPREG00000016098	sar1ab	100	80.808	ENSOMEG00000012020	-	100	80.808	Oryzias_melastigma
ENSPREG00000016098	sar1ab	100	94.444	ENSOMEG00000004948	sar1ab	100	94.444	Oryzias_melastigma
ENSPREG00000016098	sar1ab	100	83.838	ENSPKIG00000007615	sar1ab	100	83.838	Paramormyrops_kingsleyae
ENSPREG00000016098	sar1ab	100	91.919	ENSPMGG00000013330	sar1ab	100	91.919	Periophthalmus_magnuspinnatus
ENSPREG00000016098	sar1ab	100	100.000	ENSPFOG00000023432	sar1ab	100	100.000	Poecilia_formosa
ENSPREG00000016098	sar1ab	100	99.495	ENSPLAG00000023705	sar1ab	100	99.495	Poecilia_latipinna
ENSPREG00000016098	sar1ab	100	100.000	ENSPMEG00000000559	sar1ab	100	100.000	Poecilia_mexicana
ENSPREG00000016098	sar1ab	100	79.798	ENSPMEG00000001717	-	100	79.798	Poecilia_mexicana
ENSPREG00000016098	sar1ab	100	92.424	ENSPNYG00000011603	sar1ab	100	92.424	Pundamilia_nyererei
ENSPREG00000016098	sar1ab	100	86.869	ENSPNAG00000008007	sar1ab	100	86.869	Pygocentrus_nattereri
ENSPREG00000016098	sar1ab	100	86.364	ENSSFOG00015014010	sar1a	100	86.364	Scleropages_formosus
ENSPREG00000016098	sar1ab	58	91.304	ENSSMAG00000020758	sar1ab	83	91.304	Scophthalmus_maximus
ENSPREG00000016098	sar1ab	100	92.929	ENSSDUG00000010773	sar1ab	100	92.929	Seriola_dumerili
ENSPREG00000016098	sar1ab	100	92.929	ENSSLDG00000025558	sar1ab	100	92.929	Seriola_lalandi_dorsalis
ENSPREG00000016098	sar1ab	100	94.444	ENSSPAG00000009194	sar1ab	100	94.444	Stegastes_partitus
ENSPREG00000016098	sar1ab	100	91.414	ENSTRUG00000007269	sar1ab	100	91.414	Takifugu_rubripes
ENSPREG00000016098	sar1ab	100	90.404	ENSTNIG00000008635	sar1ab	100	90.404	Tetraodon_nigroviridis
ENSPREG00000016098	sar1ab	100	80.808	ENSXMAG00000026223	SAR1A	100	80.808	Xiphophorus_maculatus
ENSPREG00000016098	sar1ab	100	98.485	ENSXMAG00000003130	sar1ab	100	98.485	Xiphophorus_maculatus