EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000016105 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 17494 bases
Position: chrLG8:7522633-7540126
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000023878	Fox-1_C	PF12414.8	1e-25	1	1
ENSPREP00000023878	RRM_1	PF00076.22	3.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000024121	-	816	-	ENSPREP00000023878	271 (aa)	-	-

Gene Model

Click here to download ENSPREG00000016105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000016105's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000016105	-	61	83.735	ENSPREG00000012955	rbfox2	70	83.735

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000016105	-	62	67.172	ENSG00000100320	RBFOX2	66	60.355	Homo_sapiens
ENSPREG00000016105	-	61	66.667	ENSAMEG00000007228	RBFOX2	62	66.169	Ailuropoda_melanoleuca
ENSPREG00000016105	-	73	87.310	ENSACIG00000022922	-	81	95.930	Amphilophus_citrinellus
ENSPREG00000016105	-	52	84.286	ENSACIG00000001690	rbfox2	57	84.138	Amphilophus_citrinellus
ENSPREG00000016105	-	62	66.834	ENSANAG00000015245	RBFOX2	59	67.005	Aotus_nancymaae
ENSPREG00000016105	-	62	67.172	ENSCJAG00000019456	-	58	53.917	Callithrix_jacchus
ENSPREG00000016105	-	63	66.505	ENSCSAG00000008110	RBFOX2	51	66.019	Chlorocebus_sabaeus
ENSPREG00000016105	-	61	66.834	ENSCHOG00000002887	RBFOX2	63	66.834	Choloepus_hoffmanni
ENSPREG00000016105	-	58	78.846	ENSCPBG00000023144	RBFOX2	50	67.005	Chrysemys_picta_bellii
ENSPREG00000016105	-	62	67.172	ENSCANG00000035832	RBFOX2	50	67.005	Colobus_angolensis_palliatus
ENSPREG00000016105	-	61	85.030	ENSCVAG00000004491	rbfox2	76	85.030	Cyprinodon_variegatus
ENSPREG00000016105	-	61	88.554	ENSDARG00000052182	rbfox2	69	88.554	Danio_rerio
ENSPREG00000016105	-	61	82.738	ENSELUG00000000102	rbfox2	75	82.738	Esox_lucius
ENSPREG00000016105	-	63	66.169	ENSFDAG00000006204	RBFOX2	56	65.672	Fukomys_damarensis
ENSPREG00000016105	-	56	96.732	ENSFHEG00000006384	-	95	96.732	Fundulus_heteroclitus
ENSPREG00000016105	-	61	84.337	ENSGAFG00000008448	rbfox2	75	84.337	Gambusia_affinis
ENSPREG00000016105	-	81	85.000	ENSHBUG00000000856	-	51	84.545	Haplochromis_burtoni
ENSPREG00000016105	-	62	89.286	ENSIPUG00000016896	rbfox2	55	88.690	Ictalurus_punctatus
ENSPREG00000016105	-	61	96.386	ENSKMAG00000013354	-	82	96.319	Kryptolebias_marmoratus
ENSPREG00000016105	-	63	65.854	ENSLAFG00000027140	RBFOX2	50	65.366	Loxodonta_africana
ENSPREG00000016105	-	62	67.172	ENSMMUG00000014010	RBFOX2	50	67.005	Macaca_mulatta
ENSPREG00000016105	-	66	95.531	ENSMMOG00000007925	-	90	95.531	Mola_mola
ENSPREG00000016105	-	61	83.133	ENSMMOG00000008287	rbfox2	79	83.735	Mola_mola
ENSPREG00000016105	-	61	63.507	ENSMODG00000001122	RBFOX2	51	63.033	Monodelphis_domestica
ENSPREG00000016105	-	61	86.826	ENSMALG00000000623	rbfox2	71	86.826	Monopterus_albus
ENSPREG00000016105	-	81	80.000	ENSMALG00000002264	-	94	78.539	Monopterus_albus
ENSPREG00000016105	-	61	67.513	ENSMUSG00000033565	Rbfox2	52	62.791	Mus_musculus
ENSPREG00000016105	-	63	66.667	MGP_PahariEiJ_G0019967	Rbfox2	53	67.005	Mus_pahari
ENSPREG00000016105	-	61	67.513	ENSOANG00000007489	RBFOX2	58	67.005	Ornithorhynchus_anatinus
ENSPREG00000016105	-	62	67.172	ENSPPRG00000015635	RBFOX2	50	67.005	Panthera_pardus
ENSPREG00000016105	-	73	56.332	ENSPTRG00000014305	RBFOX2	51	64.324	Pan_troglodytes
ENSPREG00000016105	-	63	93.023	ENSPMGG00000016969	-	52	93.023	Periophthalmus_magnuspinnatus
ENSPREG00000016105	-	61	81.325	ENSPMGG00000007138	rbfox2	69	81.928	Periophthalmus_magnuspinnatus
ENSPREG00000016105	-	61	67.172	ENSPCIG00000021550	RBFOX2	50	66.667	Phascolarctos_cinereus
ENSPREG00000016105	-	61	99.398	ENSPFOG00000001869	-	52	99.398	Poecilia_formosa
ENSPREG00000016105	-	61	99.398	ENSPLAG00000002710	-	69	99.398	Poecilia_latipinna
ENSPREG00000016105	-	61	82.143	ENSPLAG00000017308	rbfox2	71	82.738	Poecilia_latipinna
ENSPREG00000016105	-	61	85.629	ENSPMEG00000007320	rbfox2	71	85.629	Poecilia_mexicana
ENSPREG00000016105	-	61	99.398	ENSPMEG00000013663	-	69	99.398	Poecilia_mexicana
ENSPREG00000016105	-	62	67.337	ENSSSCG00000000152	RBFOX2	57	66.834	Sus_scrofa
ENSPREG00000016105	-	56	72.727	ENSTRUG00000002748	rbfox2	100	72.727	Takifugu_rubripes
ENSPREG00000016105	-	56	70.349	ENSTRUG00000007739	-	51	65.104	Takifugu_rubripes
ENSPREG00000016105	-	50	78.832	ENSTNIG00000006271	rbfox2	63	78.986	Tetraodon_nigroviridis
ENSPREG00000016105	-	74	59.149	ENSUAMG00000010612	RBFOX2	51	65.854	Ursus_americanus
ENSPREG00000016105	-	58	78.205	ENSVVUG00000023561	RBFOX2	51	67.005	Vulpes_vulpes