EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000016136 (Gene tree)
Gene ID: 103481891
Gene Symbol: p4ha1a
Alias: si:ch211-146f4.5
Full Name: prolyl 4-hydroxylase subunit alpha-1-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 9916 bases
Position: chrLG19:19749511-19759426
Accession: 103481891
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000023940	2OG-FeII_Oxy	PF03171.20	2.8e-07	1	1
ENSPREP00000023927	2OG-FeII_Oxy	PF03171.20	2.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000024172	-	4106	XM_008437683	ENSPREP00000023927	540 (aa)	XP_008435905	UPI0004A266D3
ENSPRET00000024185	-	1625	XM_008437685	ENSPREP00000023940	540 (aa)	XP_008435907	UPI0004A28E46

Gene Model

Click here to download ENSPREG00000016136's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret00330	Arginine and proline metabolism	KEGG
pret01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000016136's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000016136	p4ha1a	96	71.455	ENSPREG00000010003	p4ha1b	98	70.664
ENSPREG00000016136	p4ha1a	99	62.063	ENSPREG00000004360	p4ha2	98	63.689

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000016136	p4ha1a	81	62.780	ENSAPOG00000008101	p4ha1a	91	62.780	Acanthochromis_polyacanthus
ENSPREG00000016136	p4ha1a	95	80.897	ENSACIG00000014303	p4ha1a	99	78.571	Amphilophus_citrinellus
ENSPREG00000016136	p4ha1a	99	82.900	ENSAOCG00000005514	-	99	82.900	Amphiprion_ocellaris
ENSPREG00000016136	p4ha1a	99	72.491	ENSAOCG00000005531	p4ha1a	99	72.491	Amphiprion_ocellaris
ENSPREG00000016136	p4ha1a	99	82.342	ENSAPEG00000010462	-	99	82.342	Amphiprion_percula
ENSPREG00000016136	p4ha1a	100	71.719	ENSAMXG00000018364	p4ha1a	100	71.719	Astyanax_mexicanus
ENSPREG00000016136	p4ha1a	96	77.457	ENSCSEG00000001857	-	97	80.068	Cynoglossus_semilaevis
ENSPREG00000016136	p4ha1a	99	86.642	ENSCVAG00000020081	p4ha1a	99	86.456	Cyprinodon_variegatus
ENSPREG00000016136	p4ha1a	99	74.019	ENSDARG00000033537	p4ha1a	99	74.019	Danio_rerio
ENSPREG00000016136	p4ha1a	99	73.704	ENSELUG00000005174	p4ha1a	99	73.519	Esox_lucius
ENSPREG00000016136	p4ha1a	99	81.937	ENSMAMG00000010119	p4ha1a	99	81.937	Mastacembelus_armatus
ENSPREG00000016136	p4ha1a	98	78.383	ENSMMOG00000009210	-	98	78.195	Mola_mola
ENSPREG00000016136	p4ha1a	99	79.554	ENSMALG00000013083	-	98	83.278	Monopterus_albus
ENSPREG00000016136	p4ha1a	99	72.846	ENSORLG00000014906	-	95	72.659	Oryzias_latipes
ENSPREG00000016136	p4ha1a	99	75.373	ENSORLG00020015227	-	97	75.000	Oryzias_latipes_hni
ENSPREG00000016136	p4ha1a	99	75.560	ENSORLG00015012970	-	97	75.187	Oryzias_latipes_hsok
ENSPREG00000016136	p4ha1a	98	76.880	ENSOMEG00000019702	-	99	76.692	Oryzias_melastigma
ENSPREG00000016136	p4ha1a	99	72.862	ENSPKIG00000002519	p4ha1a	99	72.862	Paramormyrops_kingsleyae
ENSPREG00000016136	p4ha1a	99	72.761	ENSPNAG00000025732	p4ha1a	99	73.134	Pygocentrus_nattereri
ENSPREG00000016136	p4ha1a	96	76.008	ENSSFOG00015009731	p4ha1	98	74.906	Scleropages_formosus
ENSPREG00000016136	p4ha1a	98	75.992	ENSTNIG00000003570	-	98	75.803	Tetraodon_nigroviridis