EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000016263 (Gene tree)
Gene ID: -
Gene Symbol: larp4ab
Alias: larp4b
Full Name: La ribonucleoprotein domain family%2C member 4Ab
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 5757 bases
Position: chrLG5:26280617-26286373
Accession: ZDB-GENE-100729-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000024108	La	PF05383.17	4.3e-16	1	1
ENSPREP00000024129	La	PF05383.17	9.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000024375	-	1131	-	ENSPREP00000024129	376 (aa)	-	-
ENSPRET00000024354	-	636	-	ENSPREP00000024108	211 (aa)	-	-

Gene Model

Click here to download ENSPREG00000016263's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000016263's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000016263	larp4ab	99	58.566	ENSG00000161813	LARP4	85	71.856	Homo_sapiens
ENSPREG00000016263	larp4ab	96	75.068	ENSAPOG00000021331	larp4ab	50	75.068	Acanthochromis_polyacanthus
ENSPREG00000016263	larp4ab	97	58.621	ENSAMEG00000001275	LARP4	51	58.621	Ailuropoda_melanoleuca
ENSPREG00000016263	larp4ab	79	75.301	ENSACIG00000000370	-	95	69.312	Amphilophus_citrinellus
ENSPREG00000016263	larp4ab	98	61.778	ENSACIG00000001198	larp4aa	79	79.021	Amphilophus_citrinellus
ENSPREG00000016263	larp4ab	96	75.068	ENSAOCG00000006387	larp4ab	50	75.068	Amphiprion_ocellaris
ENSPREG00000016263	larp4ab	96	71.429	ENSAPEG00000015441	larp4ab	98	71.429	Amphiprion_percula
ENSPREG00000016263	larp4ab	96	72.043	ENSATEG00000001018	larp4ab	50	72.043	Anabas_testudineus
ENSPREG00000016263	larp4ab	99	55.777	ENSAPLG00000013661	LARP4	50	58.090	Anas_platyrhynchos
ENSPREG00000016263	larp4ab	99	58.964	ENSANAG00000029342	LARP4	56	58.777	Aotus_nancymaae
ENSPREG00000016263	larp4ab	100	71.429	ENSACLG00000000777	larp4ab	99	70.053	Astatotilapia_calliptera
ENSPREG00000016263	larp4ab	99	58.566	ENSCJAG00000021131	LARP4	56	58.777	Callithrix_jacchus
ENSPREG00000016263	larp4ab	96	59.200	ENSCAFG00000008174	LARP4	51	59.200	Canis_familiaris
ENSPREG00000016263	larp4ab	97	59.309	ENSCAFG00020014554	LARP4	52	58.564	Canis_lupus_dingo
ENSPREG00000016263	larp4ab	99	56.746	ENSTSYG00000004342	LARP4	56	58.511	Carlito_syrichta
ENSPREG00000016263	larp4ab	95	41.892	ENSCAPG00000012942	LARP4	50	41.892	Cavia_aperea
ENSPREG00000016263	larp4ab	67	59.859	ENSCCAG00000030343	-	83	55.689	Cebus_capucinus
ENSPREG00000016263	larp4ab	99	58.566	ENSCCAG00000024439	LARP4	56	58.777	Cebus_capucinus
ENSPREG00000016263	larp4ab	75	57.233	ENSCATG00000039611	-	84	56.886	Cercocebus_atys
ENSPREG00000016263	larp4ab	99	55.731	ENSCATG00000044528	LARP4	51	57.407	Cercocebus_atys
ENSPREG00000016263	larp4ab	99	56.574	ENSCLAG00000001829	LARP4	51	58.245	Chinchilla_lanigera
ENSPREG00000016263	larp4ab	99	58.566	ENSCANG00000029159	-	56	59.309	Colobus_angolensis_palliatus
ENSPREG00000016263	larp4ab	99	51.181	ENSCANG00000033097	-	73	55.779	Colobus_angolensis_palliatus
ENSPREG00000016263	larp4ab	75	67.296	ENSCGRG00001000311	-	85	66.667	Cricetulus_griseus_chok1gshd
ENSPREG00000016263	larp4ab	75	67.925	ENSCGRG00001011674	-	77	68.421	Cricetulus_griseus_chok1gshd
ENSPREG00000016263	larp4ab	75	66.667	ENSCGRG00001011032	-	77	62.778	Cricetulus_griseus_chok1gshd
ENSPREG00000016263	larp4ab	99	57.895	ENSCGRG00001010818	Larp4	51	59.358	Cricetulus_griseus_chok1gshd
ENSPREG00000016263	larp4ab	99	57.895	ENSCGRG00000009382	Larp4	51	59.358	Cricetulus_griseus_crigri
ENSPREG00000016263	larp4ab	75	67.296	ENSCGRG00000000087	-	85	65.476	Cricetulus_griseus_crigri
ENSPREG00000016263	larp4ab	82	75.287	ENSCVAG00000001411	-	99	72.432	Cyprinodon_variegatus
ENSPREG00000016263	larp4ab	99	60.084	ENSDARG00000074979	larp4ab	80	82.979	Danio_rerio
ENSPREG00000016263	larp4ab	99	58.167	ENSDNOG00000038525	LARP4	51	59.574	Dasypus_novemcinctus
ENSPREG00000016263	larp4ab	99	57.769	ENSDORG00000004013	Larp4	50	55.319	Dipodomys_ordii
ENSPREG00000016263	larp4ab	94	41.388	ENSEBUG00000010394	LARP4	51	41.388	Eptatretus_burgeri
ENSPREG00000016263	larp4ab	99	56.000	ENSEASG00005004356	LARP4	72	60.702	Equus_asinus_asinus
ENSPREG00000016263	larp4ab	96	59.467	ENSECAG00000012479	LARP4	51	59.467	Equus_caballus
ENSPREG00000016263	larp4ab	99	60.287	ENSELUG00000018650	larp4ab	50	60.317	Esox_lucius
ENSPREG00000016263	larp4ab	96	59.474	ENSELUG00000000395	larp4aa	50	59.474	Esox_lucius
ENSPREG00000016263	larp4ab	96	59.467	ENSFCAG00000031897	LARP4	56	59.467	Felis_catus
ENSPREG00000016263	larp4ab	99	55.777	ENSFALG00000002114	LARP4	56	57.825	Ficedula_albicollis
ENSPREG00000016263	larp4ab	75	66.667	ENSFDAG00000003796	-	84	66.667	Fukomys_damarensis
ENSPREG00000016263	larp4ab	97	58.886	ENSFDAG00000006406	-	51	58.886	Fukomys_damarensis
ENSPREG00000016263	larp4ab	96	86.538	ENSFHEG00000013854	larp4ab	50	86.538	Fundulus_heteroclitus
ENSPREG00000016263	larp4ab	98	48.163	ENSGMOG00000009536	-	50	53.550	Gadus_morhua
ENSPREG00000016263	larp4ab	96	95.380	ENSGAFG00000021777	larp4ab	50	95.380	Gambusia_affinis
ENSPREG00000016263	larp4ab	65	82.609	ENSGAFG00000004280	larp4aa	72	73.485	Gambusia_affinis
ENSPREG00000016263	larp4ab	97	73.458	ENSGACG00000000680	larp4ab	54	73.458	Gasterosteus_aculeatus
ENSPREG00000016263	larp4ab	99	58.577	ENSGACG00000008381	larp4aa	98	59.626	Gasterosteus_aculeatus
ENSPREG00000016263	larp4ab	96	58.730	ENSGAGG00000006969	LARP4	50	58.730	Gopherus_agassizii
ENSPREG00000016263	larp4ab	99	58.566	ENSGGOG00000015230	LARP4	74	66.667	Gorilla_gorilla
ENSPREG00000016263	larp4ab	83	77.143	ENSHBUG00000021929	-	88	75.135	Haplochromis_burtoni
ENSPREG00000016263	larp4ab	99	54.327	ENSHGLG00000010979	-	75	50.273	Heterocephalus_glaber_female
ENSPREG00000016263	larp4ab	97	58.886	ENSHGLG00000005513	-	57	59.309	Heterocephalus_glaber_female
ENSPREG00000016263	larp4ab	99	54.327	ENSHGLG00100002832	-	75	50.273	Heterocephalus_glaber_male
ENSPREG00000016263	larp4ab	99	54.286	ENSHGLG00100011678	-	51	58.333	Heterocephalus_glaber_male
ENSPREG00000016263	larp4ab	97	58.886	ENSHGLG00100016984	-	51	59.309	Heterocephalus_glaber_male
ENSPREG00000016263	larp4ab	99	52.000	ENSHGLG00100000622	-	97	54.783	Heterocephalus_glaber_male
ENSPREG00000016263	larp4ab	99	57.692	ENSIPUG00000021659	larp4ab	52	58.774	Ictalurus_punctatus
ENSPREG00000016263	larp4ab	99	57.769	ENSSTOG00000003553	LARP4	51	59.043	Ictidomys_tridecemlineatus
ENSPREG00000016263	larp4ab	96	55.556	ENSJJAG00000014649	-	79	75.000	Jaculus_jaculus
ENSPREG00000016263	larp4ab	96	80.654	ENSKMAG00000018556	larp4ab	50	80.654	Kryptolebias_marmoratus
ENSPREG00000016263	larp4ab	97	73.118	ENSLBEG00000019306	larp4ab	50	73.118	Labrus_bergylta
ENSPREG00000016263	larp4ab	99	53.282	ENSLACG00000019090	LARP4	51	55.440	Latimeria_chalumnae
ENSPREG00000016263	larp4ab	99	56.522	ENSLAFG00000005160	LARP4	51	58.090	Loxodonta_africana
ENSPREG00000016263	larp4ab	99	58.566	ENSMFAG00000043681	LARP4	56	59.309	Macaca_fascicularis
ENSPREG00000016263	larp4ab	75	57.862	ENSMFAG00000001037	-	84	57.485	Macaca_fascicularis
ENSPREG00000016263	larp4ab	99	58.566	ENSMMUG00000008172	LARP4	56	59.309	Macaca_mulatta
ENSPREG00000016263	larp4ab	75	57.862	ENSMMUG00000045683	-	84	57.485	Macaca_mulatta
ENSPREG00000016263	larp4ab	70	55.405	ENSMNEG00000037799	-	83	52.695	Macaca_nemestrina
ENSPREG00000016263	larp4ab	99	58.566	ENSMLEG00000039661	LARP4	56	59.309	Mandrillus_leucophaeus
ENSPREG00000016263	larp4ab	83	55.114	ENSMLEG00000038232	-	93	55.114	Mandrillus_leucophaeus
ENSPREG00000016263	larp4ab	96	72.237	ENSMAMG00000002616	larp4ab	50	72.237	Mastacembelus_armatus
ENSPREG00000016263	larp4ab	100	71.429	ENSMZEG00005007771	larp4ab	99	70.053	Maylandia_zebra
ENSPREG00000016263	larp4ab	99	61.538	ENSMICG00000030156	-	89	57.214	Microcebus_murinus
ENSPREG00000016263	larp4ab	75	70.440	ENSMICG00000046883	-	85	69.939	Microcebus_murinus
ENSPREG00000016263	larp4ab	99	57.831	ENSMOCG00000020635	Larp4	51	59.358	Microtus_ochrogaster
ENSPREG00000016263	larp4ab	99	70.968	ENSMMOG00000021861	larp4ab	96	63.102	Mola_mola
ENSPREG00000016263	larp4ab	82	51.852	ENSMODG00000004844	-	98	54.839	Monodelphis_domestica
ENSPREG00000016263	larp4ab	81	77.059	ENSMALG00000015637	-	85	70.707	Monopterus_albus
ENSPREG00000016263	larp4ab	64	82.222	ENSMALG00000018631	larp4aa	74	81.159	Monopterus_albus
ENSPREG00000016263	larp4ab	99	57.490	MGP_CAROLIEiJ_G0020281	Larp4	84	60.606	Mus_caroli
ENSPREG00000016263	larp4ab	99	57.490	ENSMUSG00000023025	Larp4	60	59.893	Mus_musculus
ENSPREG00000016263	larp4ab	99	59.109	MGP_PahariEiJ_G0020284	Larp4	51	60.160	Mus_pahari
ENSPREG00000016263	larp4ab	96	60.000	ENSMLUG00000012513	-	50	60.000	Myotis_lucifugus
ENSPREG00000016263	larp4ab	99	57.143	ENSNGAG00000001577	-	51	59.249	Nannospalax_galili
ENSPREG00000016263	larp4ab	100	72.093	ENSNBRG00000015675	larp4ab	99	68.984	Neolamprologus_brichardi
ENSPREG00000016263	larp4ab	99	59.363	ENSNLEG00000017798	LARP4	56	59.574	Nomascus_leucogenys
ENSPREG00000016263	larp4ab	98	56.746	ENSODEG00000009770	LARP4	52	58.355	Octodon_degus
ENSPREG00000016263	larp4ab	97	72.386	ENSONIG00000019124	larp4ab	51	72.386	Oreochromis_niloticus
ENSPREG00000016263	larp4ab	99	56.967	ENSOANG00000004373	LARP4	66	58.777	Ornithorhynchus_anatinus
ENSPREG00000016263	larp4ab	99	58.268	ENSOCUG00000026872	-	51	59.843	Oryctolagus_cuniculus
ENSPREG00000016263	larp4ab	99	57.708	ENSOCUG00000021417	-	50	59.474	Oryctolagus_cuniculus
ENSPREG00000016263	larp4ab	82	73.256	ENSORLG00000018835	-	92	67.526	Oryzias_latipes
ENSPREG00000016263	larp4ab	82	72.674	ENSORLG00020009602	-	91	67.188	Oryzias_latipes_hni
ENSPREG00000016263	larp4ab	82	72.674	ENSORLG00015005865	-	93	67.016	Oryzias_latipes_hsok
ENSPREG00000016263	larp4ab	99	62.281	ENSOMEG00000019749	larp4aa	95	60.504	Oryzias_melastigma
ENSPREG00000016263	larp4ab	90	68.947	ENSOMEG00000008561	-	97	67.895	Oryzias_melastigma
ENSPREG00000016263	larp4ab	99	56.863	ENSOGAG00000001415	LARP4	72	55.643	Otolemur_garnettii
ENSPREG00000016263	larp4ab	99	48.000	ENSPPAG00000039122	-	86	49.728	Pan_paniscus
ENSPREG00000016263	larp4ab	99	57.143	ENSPPAG00000035100	LARP4	61	58.511	Pan_paniscus
ENSPREG00000016263	larp4ab	96	59.467	ENSPPRG00000004522	LARP4	56	59.467	Panthera_pardus
ENSPREG00000016263	larp4ab	96	59.467	ENSPTIG00000015617	LARP4	56	59.467	Panthera_tigris_altaica
ENSPREG00000016263	larp4ab	99	48.400	ENSPTRG00000045907	-	95	49.863	Pan_troglodytes
ENSPREG00000016263	larp4ab	99	57.937	ENSPTRG00000004935	LARP4	56	58.511	Pan_troglodytes
ENSPREG00000016263	larp4ab	99	58.566	ENSPANG00000022964	LARP4	56	59.309	Papio_anubis
ENSPREG00000016263	larp4ab	99	56.746	ENSPSIG00000015867	LARP4	50	58.355	Pelodiscus_sinensis
ENSPREG00000016263	larp4ab	100	66.351	ENSPMGG00000002719	larp4ab	98	62.198	Periophthalmus_magnuspinnatus
ENSPREG00000016263	larp4ab	67	80.851	ENSPMGG00000023289	-	96	78.231	Periophthalmus_magnuspinnatus
ENSPREG00000016263	larp4ab	65	65.693	ENSPMAG00000002788	LARP4	51	53.558	Petromyzon_marinus
ENSPREG00000016263	larp4ab	64	60.741	ENSPMAG00000001038	-	98	52.381	Petromyzon_marinus
ENSPREG00000016263	larp4ab	96	59.682	ENSPCIG00000000384	LARP4	50	59.682	Phascolarctos_cinereus
ENSPREG00000016263	larp4ab	99	60.317	ENSPFOG00000013148	larp4aa	53	61.749	Poecilia_formosa
ENSPREG00000016263	larp4ab	96	97.790	ENSPFOG00000009764	larp4ab	50	97.790	Poecilia_formosa
ENSPREG00000016263	larp4ab	96	97.790	ENSPLAG00000008502	larp4ab	50	97.790	Poecilia_latipinna
ENSPREG00000016263	larp4ab	96	97.790	ENSPMEG00000002720	larp4ab	50	97.790	Poecilia_mexicana
ENSPREG00000016263	larp4ab	99	58.400	ENSPPYG00000004512	-	72	58.005	Pongo_abelii
ENSPREG00000016263	larp4ab	82	49.074	ENSPPYG00000006330	-	95	50.926	Pongo_abelii
ENSPREG00000016263	larp4ab	99	56.000	ENSPCOG00000026291	LARP4	56	59.043	Propithecus_coquereli
ENSPREG00000016263	larp4ab	83	77.143	ENSPNYG00000000915	-	75	75.135	Pundamilia_nyererei
ENSPREG00000016263	larp4ab	82	48.826	ENSRNOG00000057943	AABR07058884.2	96	52.336	Rattus_norvegicus
ENSPREG00000016263	larp4ab	99	57.769	ENSRBIG00000038857	-	83	59.309	Rhinopithecus_bieti
ENSPREG00000016263	larp4ab	99	58.373	ENSRROG00000025487	-	86	54.342	Rhinopithecus_roxellana
ENSPREG00000016263	larp4ab	99	57.769	ENSRROG00000042764	-	83	59.309	Rhinopithecus_roxellana
ENSPREG00000016263	larp4ab	74	57.962	ENSSBOG00000035851	-	80	57.962	Saimiri_boliviensis_boliviensis
ENSPREG00000016263	larp4ab	99	63.942	ENSSBOG00000026650	LARP4	56	57.979	Saimiri_boliviensis_boliviensis
ENSPREG00000016263	larp4ab	64	80.741	ENSSHAG00000013246	-	77	71.756	Sarcophilus_harrisii
ENSPREG00000016263	larp4ab	99	60.944	ENSSFOG00015003868	larp4aa	50	59.946	Scleropages_formosus
ENSPREG00000016263	larp4ab	99	56.863	ENSSARG00000012469	LARP4	52	59.055	Sorex_araneus
ENSPREG00000016263	larp4ab	98	60.177	ENSSPAG00000007222	larp4aa	99	59.299	Stegastes_partitus
ENSPREG00000016263	larp4ab	96	75.610	ENSSPAG00000002172	larp4ab	50	75.610	Stegastes_partitus
ENSPREG00000016263	larp4ab	99	56.225	ENSSSCG00000028516	LARP4	51	58.621	Sus_scrofa
ENSPREG00000016263	larp4ab	97	58.466	ENSTGUG00000003479	LARP4	51	58.466	Taeniopygia_guttata
ENSPREG00000016263	larp4ab	94	55.616	ENSTRUG00000015939	larp4aa	100	55.616	Takifugu_rubripes
ENSPREG00000016263	larp4ab	99	67.810	ENSTRUG00000007206	larp4ab	52	67.810	Takifugu_rubripes
ENSPREG00000016263	larp4ab	96	69.730	ENSTNIG00000014571	larp4ab	52	69.730	Tetraodon_nigroviridis
ENSPREG00000016263	larp4ab	97	58.747	ENSTTRG00000003764	LARP4	51	58.747	Tursiops_truncatus
ENSPREG00000016263	larp4ab	97	59.151	ENSUAMG00000013764	LARP4	83	59.309	Ursus_americanus
ENSPREG00000016263	larp4ab	96	59.309	ENSUMAG00000008473	LARP4	51	59.309	Ursus_maritimus
ENSPREG00000016263	larp4ab	93	59.079	ENSVPAG00000010136	LARP4	52	57.216	Vicugna_pacos
ENSPREG00000016263	larp4ab	97	59.309	ENSVVUG00000024717	LARP4	51	59.309	Vulpes_vulpes
ENSPREG00000016263	larp4ab	100	96.543	ENSXCOG00000019635	larp4ab	99	96.543	Xiphophorus_couchianus