EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000016270 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 9674 bases
Position: chrLG11:18575681-18585354
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000024093	zf-C2H2	PF00096.26	3.2e-27	1	4
ENSPREP00000024093	zf-C2H2	PF00096.26	3.2e-27	2	4
ENSPREP00000024093	zf-C2H2	PF00096.26	3.2e-27	3	4
ENSPREP00000024093	zf-C2H2	PF00096.26	3.2e-27	4	4
ENSPREP00000024105	zf-C2H2	PF00096.26	4.2e-19	1	3
ENSPREP00000024105	zf-C2H2	PF00096.26	4.2e-19	2	3
ENSPREP00000024105	zf-C2H2	PF00096.26	4.2e-19	3	3
ENSPREP00000024093	zf-met	PF12874.7	4.8e-10	1	1
ENSPREP00000024105	zf-met	PF12874.7	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000024351	-	1230	-	ENSPREP00000024105	409 (aa)	-	-
ENSPRET00000024339	-	1038	-	ENSPREP00000024093	345 (aa)	-	-

Gene Model

Click here to download ENSPREG00000016270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000016270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000016270	-	79	45.690	ENSPREG00000014028	-	97	44.751
ENSPREG00000016270	-	77	43.561	ENSPREG00000003217	-	86	42.045
ENSPREG00000016270	-	73	34.759	ENSPREG00000008528	SNAI2	63	34.759
ENSPREG00000016270	-	81	38.971	ENSPREG00000021246	-	91	38.971
ENSPREG00000016270	-	91	32.857	ENSPREG00000003213	-	90	32.740
ENSPREG00000016270	-	93	45.455	ENSPREG00000013719	-	98	40.756
ENSPREG00000016270	-	76	41.339	ENSPREG00000020014	-	91	41.339
ENSPREG00000016270	-	75	50.413	ENSPREG00000016249	-	91	52.679
ENSPREG00000016270	-	86	43.103	ENSPREG00000004745	-	99	40.625
ENSPREG00000016270	-	76	41.379	ENSPREG00000000733	-	86	41.379
ENSPREG00000016270	-	92	41.341	ENSPREG00000003650	-	84	41.341
ENSPREG00000016270	-	76	40.000	ENSPREG00000004571	-	99	41.825
ENSPREG00000016270	-	76	40.708	ENSPREG00000009372	-	94	34.985
ENSPREG00000016270	-	78	41.923	ENSPREG00000000364	-	79	41.923
ENSPREG00000016270	-	77	44.340	ENSPREG00000004036	-	88	44.444
ENSPREG00000016270	-	76	40.927	ENSPREG00000001514	zgc:113343	60	44.444
ENSPREG00000016270	-	78	36.364	ENSPREG00000014898	-	61	36.364
ENSPREG00000016270	-	78	43.460	ENSPREG00000003393	-	75	43.460
ENSPREG00000016270	-	86	48.276	ENSPREG00000003614	-	100	45.136
ENSPREG00000016270	-	89	47.205	ENSPREG00000005015	-	98	42.009
ENSPREG00000016270	-	94	40.000	ENSPREG00000000467	-	99	41.949
ENSPREG00000016270	-	91	36.090	ENSPREG00000015342	-	94	34.586
ENSPREG00000016270	-	77	49.123	ENSPREG00000011439	-	96	47.788
ENSPREG00000016270	-	78	39.796	ENSPREG00000018011	-	58	42.105
ENSPREG00000016270	-	75	35.683	ENSPREG00000017631	znf668	76	34.783
ENSPREG00000016270	-	74	45.614	ENSPREG00000015352	-	62	45.614
ENSPREG00000016270	-	77	43.972	ENSPREG00000003483	-	84	43.972
ENSPREG00000016270	-	80	38.281	ENSPREG00000018366	prdm5	85	40.323
ENSPREG00000016270	-	76	40.377	ENSPREG00000003555	-	95	36.702
ENSPREG00000016270	-	80	44.706	ENSPREG00000020897	zbtb47b	70	44.706
ENSPREG00000016270	-	95	40.909	ENSPREG00000016593	-	84	40.909
ENSPREG00000016270	-	74	40.367	ENSPREG00000002603	-	91	40.157
ENSPREG00000016270	-	77	37.879	ENSPREG00000019161	-	91	49.123
ENSPREG00000016270	-	77	36.538	ENSPREG00000001386	-	85	37.828
ENSPREG00000016270	-	76	45.283	ENSPREG00000014945	-	99	47.303
ENSPREG00000016270	-	92	47.368	ENSPREG00000006461	-	98	47.368
ENSPREG00000016270	-	94	38.686	ENSPREG00000002181	-	97	41.573
ENSPREG00000016270	-	76	44.643	ENSPREG00000004728	-	75	44.643
ENSPREG00000016270	-	82	36.052	ENSPREG00000016129	-	99	34.877
ENSPREG00000016270	-	76	37.313	ENSPREG00000013965	-	95	45.588
ENSPREG00000016270	-	76	37.333	ENSPREG00000010261	zbtb17	85	37.333
ENSPREG00000016270	-	92	36.634	ENSPREG00000013107	-	99	38.628
ENSPREG00000016270	-	74	32.039	ENSPREG00000019990	-	88	40.000
ENSPREG00000016270	-	76	39.806	ENSPREG00000014105	-	85	34.409
ENSPREG00000016270	-	87	40.741	ENSPREG00000015017	-	96	41.121
ENSPREG00000016270	-	91	37.569	ENSPREG00000014330	-	87	39.815
ENSPREG00000016270	-	92	43.046	ENSPREG00000002548	-	93	43.046
ENSPREG00000016270	-	82	35.664	ENSPREG00000005852	zbtb41	50	35.366
ENSPREG00000016270	-	77	43.662	ENSPREG00000002637	-	78	40.244
ENSPREG00000016270	-	92	41.071	ENSPREG00000013699	-	82	41.071
ENSPREG00000016270	-	76	40.580	ENSPREG00000021924	-	81	46.809
ENSPREG00000016270	-	74	37.681	ENSPREG00000016116	-	99	37.681
ENSPREG00000016270	-	79	44.643	ENSPREG00000017892	-	88	44.545
ENSPREG00000016270	-	86	40.230	ENSPREG00000013154	-	92	40.230
ENSPREG00000016270	-	90	45.232	ENSPREG00000016308	-	96	46.825
ENSPREG00000016270	-	94	39.623	ENSPREG00000000449	-	66	40.684
ENSPREG00000016270	-	87	38.813	ENSPREG00000014373	-	86	43.359
ENSPREG00000016270	-	81	38.163	ENSPREG00000000153	-	88	38.290
ENSPREG00000016270	-	74	50.862	ENSPREG00000001743	-	73	50.862
ENSPREG00000016270	-	76	47.059	ENSPREG00000001713	-	84	47.059
ENSPREG00000016270	-	78	33.166	ENSPREG00000009745	PRDM15	52	30.204
ENSPREG00000016270	-	87	41.579	ENSPREG00000003894	-	96	40.520
ENSPREG00000016270	-	90	39.130	ENSPREG00000015132	-	91	36.090
ENSPREG00000016270	-	73	34.653	ENSPREG00000018985	scrt1b	78	34.653
ENSPREG00000016270	-	83	44.534	ENSPREG00000011741	-	95	48.696
ENSPREG00000016270	-	93	51.551	ENSPREG00000016204	-	79	51.551
ENSPREG00000016270	-	77	43.500	ENSPREG00000002664	-	90	42.424
ENSPREG00000016270	-	77	43.668	ENSPREG00000012539	-	91	40.996
ENSPREG00000016270	-	79	44.366	ENSPREG00000019972	-	99	44.366
ENSPREG00000016270	-	91	38.739	ENSPREG00000015247	-	84	38.732
ENSPREG00000016270	-	96	51.163	ENSPREG00000004746	-	100	49.412
ENSPREG00000016270	-	94	40.845	ENSPREG00000014800	-	95	42.966
ENSPREG00000016270	-	76	42.342	ENSPREG00000014127	-	83	42.222
ENSPREG00000016270	-	91	43.805	ENSPREG00000009495	-	66	45.217
ENSPREG00000016270	-	79	45.930	ENSPREG00000004006	-	53	45.930
ENSPREG00000016270	-	82	37.931	ENSPREG00000013727	-	96	39.130
ENSPREG00000016270	-	75	39.669	ENSPREG00000014851	-	75	39.669
ENSPREG00000016270	-	76	34.831	ENSPREG00000005538	-	80	33.939
ENSPREG00000016270	-	83	42.609	ENSPREG00000006537	-	99	40.650
ENSPREG00000016270	-	87	42.135	ENSPREG00000004725	-	78	41.921
ENSPREG00000016270	-	74	40.411	ENSPREG00000015689	-	65	40.411
ENSPREG00000016270	-	95	37.052	ENSPREG00000015421	-	74	39.738
ENSPREG00000016270	-	77	34.375	ENSPREG00000008826	-	88	47.541
ENSPREG00000016270	-	81	42.294	ENSPREG00000004839	-	94	40.078
ENSPREG00000016270	-	89	48.101	ENSPREG00000014477	-	97	48.000
ENSPREG00000016270	-	76	44.776	ENSPREG00000001952	-	90	44.776
ENSPREG00000016270	-	89	48.760	ENSPREG00000007431	-	70	48.361
ENSPREG00000016270	-	89	40.000	ENSPREG00000002615	-	73	40.288
ENSPREG00000016270	-	81	35.161	ENSPREG00000015226	-	97	35.887
ENSPREG00000016270	-	75	34.914	ENSPREG00000002582	-	61	37.226
ENSPREG00000016270	-	94	40.609	ENSPREG00000014348	-	75	40.609
ENSPREG00000016270	-	92	38.314	ENSPREG00000014340	-	93	38.636
ENSPREG00000016270	-	84	42.085	ENSPREG00000010437	-	78	41.129
ENSPREG00000016270	-	79	41.600	ENSPREG00000013689	-	98	41.600
ENSPREG00000016270	-	77	51.825	ENSPREG00000001823	-	78	51.825
ENSPREG00000016270	-	77	46.753	ENSPREG00000004306	-	95	51.351
ENSPREG00000016270	-	77	44.755	ENSPREG00000019806	-	50	44.755
ENSPREG00000016270	-	93	38.012	ENSPREG00000006360	-	99	39.819
ENSPREG00000016270	-	92	39.823	ENSPREG00000013780	-	95	43.173
ENSPREG00000016270	-	83	36.264	ENSPREG00000017637	znf646	89	36.264
ENSPREG00000016270	-	77	38.323	ENSPREG00000000451	-	73	41.667
ENSPREG00000016270	-	75	44.186	ENSPREG00000000853	-	50	45.926
ENSPREG00000016270	-	76	44.144	ENSPREG00000007997	GFI1	59	36.496
ENSPREG00000016270	-	75	44.654	ENSPREG00000002696	-	88	40.800
ENSPREG00000016270	-	77	45.570	ENSPREG00000012132	-	99	42.412
ENSPREG00000016270	-	92	46.154	ENSPREG00000016220	-	95	47.532
ENSPREG00000016270	-	77	40.351	ENSPREG00000002642	-	92	40.351
ENSPREG00000016270	-	75	40.336	ENSPREG00000009488	-	91	44.068
ENSPREG00000016270	-	94	42.408	ENSPREG00000002681	-	96	42.408
ENSPREG00000016270	-	78	44.118	ENSPREG00000002715	-	99	42.063
ENSPREG00000016270	-	77	31.544	ENSPREG00000001101	znf319b	85	35.961
ENSPREG00000016270	-	89	42.857	ENSPREG00000005144	-	98	40.909
ENSPREG00000016270	-	78	39.024	ENSPREG00000007135	-	73	35.593
ENSPREG00000016270	-	75	42.604	ENSPREG00000001774	-	86	40.909
ENSPREG00000016270	-	78	37.915	ENSPREG00000016144	-	88	37.991
ENSPREG00000016270	-	88	44.134	ENSPREG00000015254	-	83	44.134
ENSPREG00000016270	-	77	46.043	ENSPREG00000009121	-	62	46.043
ENSPREG00000016270	-	92	40.816	ENSPREG00000014360	-	90	40.816
ENSPREG00000016270	-	87	44.706	ENSPREG00000014366	-	98	44.706
ENSPREG00000016270	-	77	49.645	ENSPREG00000015286	-	98	42.991
ENSPREG00000016270	-	79	34.307	ENSPREG00000007146	-	73	33.462
ENSPREG00000016270	-	85	45.247	ENSPREG00000013476	-	99	45.247
ENSPREG00000016270	-	77	32.692	ENSPREG00000002440	patz1	51	33.163
ENSPREG00000016270	-	93	40.187	ENSPREG00000001441	-	91	46.479
ENSPREG00000016270	-	89	43.750	ENSPREG00000003523	-	50	43.750
ENSPREG00000016270	-	81	45.652	ENSPREG00000013112	-	92	42.966
ENSPREG00000016270	-	95	43.373	ENSPREG00000021537	-	99	43.373
ENSPREG00000016270	-	87	39.130	ENSPREG00000004672	-	92	40.278
ENSPREG00000016270	-	76	42.105	ENSPREG00000021718	gfi1b	57	42.105
ENSPREG00000016270	-	80	42.353	ENSPREG00000015081	-	97	41.079
ENSPREG00000016270	-	79	41.102	ENSPREG00000003193	-	99	41.102
ENSPREG00000016270	-	83	35.294	ENSPREG00000016858	ZNF319	87	37.762
ENSPREG00000016270	-	93	32.227	ENSPREG00000016186	-	86	36.129
ENSPREG00000016270	-	84	31.818	ENSPREG00000001147	scrt2	53	32.418

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000016270	-	75	35.931	ENSAPOG00000021496	-	58	35.714	Acanthochromis_polyacanthus
ENSPREG00000016270	-	74	43.396	ENSAPOG00000000128	-	52	43.396	Acanthochromis_polyacanthus
ENSPREG00000016270	-	84	36.752	ENSACIG00000016133	-	70	36.752	Amphilophus_citrinellus
ENSPREG00000016270	-	92	45.556	ENSAPEG00000011635	-	90	45.556	Amphiprion_percula
ENSPREG00000016270	-	77	42.623	ENSATEG00000024549	-	78	34.574	Anabas_testudineus
ENSPREG00000016270	-	79	43.396	ENSATEG00000015828	-	79	34.177	Anabas_testudineus
ENSPREG00000016270	-	93	44.724	ENSATEG00000011235	-	91	44.724	Anabas_testudineus
ENSPREG00000016270	-	77	42.138	ENSATEG00000011202	-	67	42.138	Anabas_testudineus
ENSPREG00000016270	-	76	37.126	ENSATEG00000024551	-	66	40.580	Anabas_testudineus
ENSPREG00000016270	-	76	37.615	ENSATEG00000022022	-	89	37.615	Anabas_testudineus
ENSPREG00000016270	-	75	41.739	ENSCVAG00000004508	-	67	32.872	Cyprinodon_variegatus
ENSPREG00000016270	-	78	49.254	ENSCVAG00000003630	-	70	41.706	Cyprinodon_variegatus
ENSPREG00000016270	-	76	34.054	ENSHBUG00000000731	-	57	37.391	Haplochromis_burtoni
ENSPREG00000016270	-	92	38.571	ENSHBUG00000002878	-	91	38.571	Haplochromis_burtoni
ENSPREG00000016270	-	92	44.444	ENSHCOG00000008205	-	89	50.847	Hippocampus_comes
ENSPREG00000016270	-	76	41.803	ENSKMAG00000019912	-	78	32.000	Kryptolebias_marmoratus
ENSPREG00000016270	-	88	36.957	ENSKMAG00000000520	-	54	41.880	Kryptolebias_marmoratus
ENSPREG00000016270	-	72	40.789	ENSLBEG00000014676	-	74	30.714	Labrus_bergylta
ENSPREG00000016270	-	76	39.416	ENSLBEG00000026552	-	61	33.333	Labrus_bergylta
ENSPREG00000016270	-	89	38.217	ENSLBEG00000011006	-	85	42.541	Labrus_bergylta
ENSPREG00000016270	-	91	42.308	ENSMAMG00000022152	-	86	42.308	Mastacembelus_armatus
ENSPREG00000016270	-	94	36.196	ENSMZEG00005008312	-	67	36.196	Maylandia_zebra
ENSPREG00000016270	-	75	33.591	ENSMZEG00005004047	-	57	37.391	Maylandia_zebra
ENSPREG00000016270	-	79	41.026	ENSMALG00000014761	-	79	35.500	Monopterus_albus
ENSPREG00000016270	-	93	32.895	ENSNBRG00000024051	-	79	33.702	Neolamprologus_brichardi
ENSPREG00000016270	-	75	43.636	ENSNBRG00000013838	-	52	43.636	Neolamprologus_brichardi
ENSPREG00000016270	-	77	43.617	ENSNBRG00000004381	-	75	43.617	Neolamprologus_brichardi
ENSPREG00000016270	-	78	38.983	ENSORLG00000014311	-	60	35.000	Oryzias_latipes
ENSPREG00000016270	-	76	40.278	ENSORLG00000025719	-	94	37.430	Oryzias_latipes
ENSPREG00000016270	-	74	39.301	ENSORLG00020009554	-	81	36.667	Oryzias_latipes_hni
ENSPREG00000016270	-	75	37.349	ENSORLG00020005815	-	86	32.353	Oryzias_latipes_hni
ENSPREG00000016270	-	78	38.983	ENSORLG00015014797	-	60	34.500	Oryzias_latipes_hsok
ENSPREG00000016270	-	76	40.278	ENSORLG00015012599	-	94	37.430	Oryzias_latipes_hsok
ENSPREG00000016270	-	92	42.029	ENSOMEG00000010906	-	81	42.029	Oryzias_melastigma
ENSPREG00000016270	-	80	38.596	ENSOMEG00000015640	-	89	37.736	Oryzias_melastigma
ENSPREG00000016270	-	75	44.828	ENSPFOG00000012948	-	57	44.828	Poecilia_formosa
ENSPREG00000016270	-	85	46.875	ENSPLAG00000009651	-	91	46.875	Poecilia_latipinna
ENSPREG00000016270	-	85	36.774	ENSPMEG00000023113	-	78	36.774	Poecilia_mexicana
ENSPREG00000016270	-	77	40.887	ENSPNYG00000023882	-	71	40.887	Pundamilia_nyererei
ENSPREG00000016270	-	93	34.000	ENSPNYG00000019187	-	83	40.136	Pundamilia_nyererei
ENSPREG00000016270	-	77	40.187	ENSPNAG00000007754	-	59	33.529	Pygocentrus_nattereri
ENSPREG00000016270	-	81	43.350	ENSPNAG00000010317	-	89	43.350	Pygocentrus_nattereri
ENSPREG00000016270	-	74	48.649	ENSSLDG00000007568	-	93	44.643	Seriola_lalandi_dorsalis
ENSPREG00000016270	-	92	32.589	ENSSPAG00000021950	-	94	35.673	Stegastes_partitus
ENSPREG00000016270	-	91	32.900	ENSSPAG00000010524	-	73	38.202	Stegastes_partitus
ENSPREG00000016270	-	77	44.755	ENSSPAG00000021940	-	65	34.513	Stegastes_partitus
ENSPREG00000016270	-	74	36.957	ENSSPAG00000017093	-	51	36.508	Stegastes_partitus
ENSPREG00000016270	-	77	42.358	ENSXETG00000002690	-	63	41.830	Xenopus_tropicalis
ENSPREG00000016270	-	76	37.895	ENSXCOG00000018315	-	91	37.895	Xiphophorus_couchianus