EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000016484 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 6996 bases
Position: chrLG5:15648900-15655895
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000024430	SM-ATX	PF14438.6	6.2e-09	1	1
ENSPREP00000024430	LSM14	PF12701.7	1.7e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000024675	-	465	-	ENSPREP00000024430	154 (aa)	-	-

Gene Model

Click here to download ENSPREG00000016484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000016484's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000016484	-	54	65.060	ENSPREG00000007817	-	95	65.060

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000016484	-	65	59.000	ENSAPOG00000009997	-	93	59.000	Acanthochromis_polyacanthus
ENSPREG00000016484	-	62	64.583	ENSACIG00000003134	-	78	64.583	Amphilophus_citrinellus
ENSPREG00000016484	-	62	63.542	ENSAPEG00000013779	-	95	63.542	Amphiprion_percula
ENSPREG00000016484	-	53	69.512	ENSATEG00000015882	-	93	69.512	Anabas_testudineus
ENSPREG00000016484	-	63	90.722	ENSCVAG00000005570	-	100	90.722	Cyprinodon_variegatus
ENSPREG00000016484	-	62	66.667	ENSCVAG00000012411	-	99	66.667	Cyprinodon_variegatus
ENSPREG00000016484	-	62	65.625	ENSGAFG00000013718	-	99	65.625	Gambusia_affinis
ENSPREG00000016484	-	62	89.474	ENSHBUG00000011864	-	71	89.474	Haplochromis_burtoni
ENSPREG00000016484	-	59	67.033	ENSHBUG00000012323	-	87	67.033	Haplochromis_burtoni
ENSPREG00000016484	-	61	86.170	ENSHCOG00000004862	-	86	86.170	Hippocampus_comes
ENSPREG00000016484	-	62	63.542	ENSKMAG00000012850	-	99	63.542	Kryptolebias_marmoratus
ENSPREG00000016484	-	58	61.111	ENSKMAG00000016674	-	85	61.053	Kryptolebias_marmoratus
ENSPREG00000016484	-	62	66.667	ENSLBEG00000007971	-	92	66.667	Labrus_bergylta
ENSPREG00000016484	-	69	85.981	ENSLBEG00000016427	lsm14b	74	85.981	Labrus_bergylta
ENSPREG00000016484	-	69	72.642	ENSNGAG00000016305	-	83	72.642	Nannospalax_galili
ENSPREG00000016484	-	59	68.132	ENSNBRG00000022370	-	87	68.132	Neolamprologus_brichardi
ENSPREG00000016484	-	62	89.474	ENSNBRG00000022606	-	71	89.474	Neolamprologus_brichardi
ENSPREG00000016484	-	62	63.918	ENSORLG00020018184	-	99	63.918	Oryzias_latipes_hni
ENSPREG00000016484	-	52	65.000	ENSOMEG00000007241	-	96	65.000	Oryzias_melastigma
ENSPREG00000016484	-	62	80.000	ENSPKIG00000003275	lsm14b	89	79.167	Paramormyrops_kingsleyae
ENSPREG00000016484	-	62	89.474	ENSPMGG00000014569	lsm14b	59	89.474	Periophthalmus_magnuspinnatus
ENSPREG00000016484	-	64	50.505	ENSPMGG00000004595	-	100	50.505	Periophthalmus_magnuspinnatus
ENSPREG00000016484	-	62	89.474	ENSPNYG00000019601	-	71	89.474	Pundamilia_nyererei
ENSPREG00000016484	-	59	67.033	ENSPNYG00000021706	-	86	67.033	Pundamilia_nyererei
ENSPREG00000016484	-	55	69.412	ENSSLDG00000011341	-	92	69.412	Seriola_lalandi_dorsalis
ENSPREG00000016484	-	55	91.667	ENSSLDG00000011706	-	91	91.667	Seriola_lalandi_dorsalis
ENSPREG00000016484	-	55	69.412	ENSSLDG00000012686	-	92	69.412	Seriola_lalandi_dorsalis
ENSPREG00000016484	-	62	63.158	ENSSPAG00000018837	-	94	63.158	Stegastes_partitus
ENSPREG00000016484	-	56	62.791	ENSXCOG00000011423	-	95	62.791	Xiphophorus_couchianus
ENSPREG00000016484	-	61	95.745	ENSXCOG00000017365	-	95	95.745	Xiphophorus_couchianus
ENSPREG00000016484	-	56	62.791	ENSXMAG00000015481	-	95	62.791	Xiphophorus_maculatus