EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000016619 (Gene tree)
Gene ID: 103481027
Gene Symbol: rsl1d1
Alias: si:dkey-16i5.10
Full Name: ribosomal L1 domain containing 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 5503 bases
Position: chrLG19:773541-779043
Accession: 103481027
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000024646	Ribosomal_L1	PF00687.21	6.5e-49	1	1
ENSPREP00000024616	Ribosomal_L1	PF00687.21	4.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000024863	-	1182	-	ENSPREP00000024616	393 (aa)	-	-
ENSPRET00000024893	-	1158	XM_008436255	ENSPREP00000024646	385 (aa)	XP_008434477	-

Gene Model

Click here to download ENSPREG00000016619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000016619's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000016619	rsl1d1	74	40.176	ENSG00000171490	RSL1D1	97	60.000	Homo_sapiens
ENSPREG00000016619	rsl1d1	77	63.492	ENSAPOG00000004544	rsl1d1	96	57.143	Acanthochromis_polyacanthus
ENSPREG00000016619	rsl1d1	62	45.492	ENSAMEG00000009570	RSL1D1	52	44.358	Ailuropoda_melanoleuca
ENSPREG00000016619	rsl1d1	79	61.688	ENSACIG00000006608	rsl1d1	93	60.191	Amphilophus_citrinellus
ENSPREG00000016619	rsl1d1	77	64.286	ENSAOCG00000001548	rsl1d1	96	57.520	Amphiprion_ocellaris
ENSPREG00000016619	rsl1d1	77	64.286	ENSAPEG00000003334	rsl1d1	96	57.520	Amphiprion_percula
ENSPREG00000016619	rsl1d1	75	62.258	ENSATEG00000009247	rsl1d1	97	52.184	Anabas_testudineus
ENSPREG00000016619	rsl1d1	61	55.085	ENSAPLG00000004451	RSL1D1	54	54.733	Anas_platyrhynchos
ENSPREG00000016619	rsl1d1	76	40.419	ENSANAG00000028185	-	58	47.244	Aotus_nancymaae
ENSPREG00000016619	rsl1d1	76	40.173	ENSANAG00000034590	-	51	48.249	Aotus_nancymaae
ENSPREG00000016619	rsl1d1	76	62.338	ENSACLG00000017535	rsl1d1	87	63.871	Astatotilapia_calliptera
ENSPREG00000016619	rsl1d1	81	51.662	ENSAMXG00000008624	rsl1d1	87	51.515	Astyanax_mexicanus
ENSPREG00000016619	rsl1d1	76	39.595	ENSCAFG00000018865	RSL1D1	52	45.136	Canis_familiaris
ENSPREG00000016619	rsl1d1	65	35.341	ENSCAFG00020002457	-	50	35.341	Canis_lupus_dingo
ENSPREG00000016619	rsl1d1	74	36.728	ENSCHIG00000009867	-	70	36.728	Capra_hircus
ENSPREG00000016619	rsl1d1	72	45.126	ENSTSYG00000009276	RSL1D1	51	47.471	Carlito_syrichta
ENSPREG00000016619	rsl1d1	61	47.660	ENSCPOG00000010630	RSL1D1	55	45.560	Cavia_porcellus
ENSPREG00000016619	rsl1d1	92	35.876	ENSCCAG00000025197	-	54	43.254	Cebus_capucinus
ENSPREG00000016619	rsl1d1	81	38.261	ENSCCAG00000031641	-	50	44.915	Cebus_capucinus
ENSPREG00000016619	rsl1d1	76	40.462	ENSCCAG00000017391	-	52	47.826	Cebus_capucinus
ENSPREG00000016619	rsl1d1	74	40.118	ENSCATG00000031153	RSL1D1	55	48.305	Cercocebus_atys
ENSPREG00000016619	rsl1d1	61	48.936	ENSCLAG00000010975	RSL1D1	55	46.718	Chinchilla_lanigera
ENSPREG00000016619	rsl1d1	65	46.614	ENSCHOG00000010827	RSL1D1	51	46.614	Choloepus_hoffmanni
ENSPREG00000016619	rsl1d1	68	52.692	ENSCPBG00000004564	RSL1D1	92	55.450	Chrysemys_picta_bellii
ENSPREG00000016619	rsl1d1	59	34.211	ENSCING00000011810	-	100	34.211	Ciona_intestinalis
ENSPREG00000016619	rsl1d1	70	30.112	ENSCSAVG00000011797	-	72	30.328	Ciona_savignyi
ENSPREG00000016619	rsl1d1	81	38.753	ENSCANG00000029202	RSL1D1	50	48.305	Colobus_angolensis_palliatus
ENSPREG00000016619	rsl1d1	79	60.252	ENSCSEG00000019693	rsl1d1	98	53.627	Cynoglossus_semilaevis
ENSPREG00000016619	rsl1d1	95	61.247	ENSCVAG00000000672	rsl1d1	95	61.475	Cyprinodon_variegatus
ENSPREG00000016619	rsl1d1	76	56.436	ENSDARG00000055868	rsl1d1	79	56.229	Danio_rerio
ENSPREG00000016619	rsl1d1	60	48.718	ENSEBUG00000005400	-	56	48.718	Eptatretus_burgeri
ENSPREG00000016619	rsl1d1	61	49.576	ENSEASG00005011499	RSL1D1	52	47.471	Equus_asinus_asinus
ENSPREG00000016619	rsl1d1	61	50.000	ENSECAG00000025036	RSL1D1	52	47.860	Equus_caballus
ENSPREG00000016619	rsl1d1	77	59.797	ENSELUG00000019243	rsl1d1	96	54.070	Esox_lucius
ENSPREG00000016619	rsl1d1	69	45.455	ENSFCAG00000010114	RSL1D1	52	45.455	Felis_catus
ENSPREG00000016619	rsl1d1	65	54.365	ENSFALG00000003869	RSL1D1	52	54.365	Ficedula_albicollis
ENSPREG00000016619	rsl1d1	63	45.418	ENSFDAG00000011414	RSL1D1	56	45.418	Fukomys_damarensis
ENSPREG00000016619	rsl1d1	77	66.447	ENSFHEG00000017235	rsl1d1	93	58.730	Fundulus_heteroclitus
ENSPREG00000016619	rsl1d1	77	53.716	ENSGMOG00000013048	rsl1d1	96	53.356	Gadus_morhua
ENSPREG00000016619	rsl1d1	61	57.627	ENSGALG00000033690	RSL1D1	56	56.000	Gallus_gallus
ENSPREG00000016619	rsl1d1	96	75.397	ENSGAFG00000020794	rsl1d1	94	74.868	Gambusia_affinis
ENSPREG00000016619	rsl1d1	77	59.596	ENSGACG00000004483	rsl1d1	83	59.259	Gasterosteus_aculeatus
ENSPREG00000016619	rsl1d1	76	62.951	ENSHBUG00000001551	rsl1d1	86	62.215	Haplochromis_burtoni
ENSPREG00000016619	rsl1d1	61	48.085	ENSHGLG00000006774	RSL1D1	58	45.525	Heterocephalus_glaber_female
ENSPREG00000016619	rsl1d1	65	45.525	ENSHGLG00100017781	RSL1D1	58	45.525	Heterocephalus_glaber_male
ENSPREG00000016619	rsl1d1	88	52.478	ENSHCOG00000015208	rsl1d1	96	51.445	Hippocampus_comes
ENSPREG00000016619	rsl1d1	81	51.829	ENSIPUG00000001677	rsl1d1	86	51.988	Ictalurus_punctatus
ENSPREG00000016619	rsl1d1	81	36.901	ENSJJAG00000012115	Rsl1d1	55	42.520	Jaculus_jaculus
ENSPREG00000016619	rsl1d1	95	57.641	ENSKMAG00000021908	rsl1d1	96	56.649	Kryptolebias_marmoratus
ENSPREG00000016619	rsl1d1	76	63.051	ENSLBEG00000001076	rsl1d1	84	61.967	Labrus_bergylta
ENSPREG00000016619	rsl1d1	84	50.588	ENSLOCG00000007416	rsl1d1	96	45.985	Lepisosteus_oculatus
ENSPREG00000016619	rsl1d1	78	39.884	ENSLAFG00000013664	RSL1D1	50	47.679	Loxodonta_africana
ENSPREG00000016619	rsl1d1	81	39.024	ENSMMUG00000019632	RSL1D1	99	54.777	Macaca_mulatta
ENSPREG00000016619	rsl1d1	77	64.151	ENSMAMG00000004385	rsl1d1	97	58.021	Mastacembelus_armatus
ENSPREG00000016619	rsl1d1	76	62.987	ENSMZEG00005007150	rsl1d1	87	63.548	Maylandia_zebra
ENSPREG00000016619	rsl1d1	94	41.627	ENSMGAG00000000863	RSL1D1	58	55.294	Meleagris_gallopavo
ENSPREG00000016619	rsl1d1	76	39.939	ENSMOCG00000017724	Rsl1d1	53	46.552	Microtus_ochrogaster
ENSPREG00000016619	rsl1d1	77	58.249	ENSMMOG00000003730	rsl1d1	100	57.239	Mola_mola
ENSPREG00000016619	rsl1d1	76	43.675	ENSMODG00000004625	-	52	51.915	Monodelphis_domestica
ENSPREG00000016619	rsl1d1	60	45.690	ENSMODG00000029494	-	53	45.690	Monodelphis_domestica
ENSPREG00000016619	rsl1d1	62	75.105	ENSMALG00000009531	rsl1d1	97	58.047	Monopterus_albus
ENSPREG00000016619	rsl1d1	81	39.489	ENSMUSG00000005846	Rsl1d1	52	46.610	Mus_musculus
ENSPREG00000016619	rsl1d1	74	40.248	MGP_PahariEiJ_G0016164	Rsl1d1	54	46.122	Mus_pahari
ENSPREG00000016619	rsl1d1	81	39.205	MGP_SPRETEiJ_G0021352	Rsl1d1	52	46.610	Mus_spretus
ENSPREG00000016619	rsl1d1	61	48.936	ENSMPUG00000014548	RSL1D1	51	47.656	Mustela_putorius_furo
ENSPREG00000016619	rsl1d1	60	45.299	ENSNGAG00000009086	-	50	44.828	Nannospalax_galili
ENSPREG00000016619	rsl1d1	60	43.534	ENSNGAG00000013578	-	57	41.473	Nannospalax_galili
ENSPREG00000016619	rsl1d1	75	64.706	ENSNBRG00000002777	rsl1d1	97	57.219	Neolamprologus_brichardi
ENSPREG00000016619	rsl1d1	75	39.769	ENSNLEG00000012149	-	62	48.305	Nomascus_leucogenys
ENSPREG00000016619	rsl1d1	75	45.048	ENSOPRG00000004442	-	56	49.206	Ochotona_princeps
ENSPREG00000016619	rsl1d1	75	63.725	ENSONIG00000019757	rsl1d1	89	61.783	Oreochromis_niloticus
ENSPREG00000016619	rsl1d1	61	50.213	ENSOANG00000009408	-	55	50.213	Ornithorhynchus_anatinus
ENSPREG00000016619	rsl1d1	61	49.576	ENSOCUG00000004751	RSL1D1	50	49.576	Oryctolagus_cuniculus
ENSPREG00000016619	rsl1d1	77	62.290	ENSORLG00000002877	rsl1d1	89	58.462	Oryzias_latipes
ENSPREG00000016619	rsl1d1	81	59.873	ENSORLG00020006636	rsl1d1	89	57.846	Oryzias_latipes_hni
ENSPREG00000016619	rsl1d1	77	62.207	ENSORLG00015005427	rsl1d1	89	57.846	Oryzias_latipes_hsok
ENSPREG00000016619	rsl1d1	77	63.758	ENSOMEG00000008036	rsl1d1	93	55.586	Oryzias_melastigma
ENSPREG00000016619	rsl1d1	76	40.762	ENSPTIG00000005526	RSL1D1	50	48.101	Panthera_tigris_altaica
ENSPREG00000016619	rsl1d1	95	44.855	ENSPKIG00000022687	rsl1d1	96	45.430	Paramormyrops_kingsleyae
ENSPREG00000016619	rsl1d1	75	46.106	ENSPSIG00000011642	RSL1D1	51	54.936	Pelodiscus_sinensis
ENSPREG00000016619	rsl1d1	77	64.026	ENSPMGG00000022261	rsl1d1	100	62.706	Periophthalmus_magnuspinnatus
ENSPREG00000016619	rsl1d1	82	38.827	ENSPEMG00000009523	Rsl1d1	51	47.845	Peromyscus_maniculatus_bairdii
ENSPREG00000016619	rsl1d1	77	45.860	ENSPCIG00000026851	-	59	52.340	Phascolarctos_cinereus
ENSPREG00000016619	rsl1d1	69	87.454	ENSPFOG00000005017	rsl1d1	72	87.356	Poecilia_formosa
ENSPREG00000016619	rsl1d1	96	80.000	ENSPLAG00000000482	rsl1d1	85	78.133	Poecilia_latipinna
ENSPREG00000016619	rsl1d1	96	79.947	ENSPMEG00000007032	rsl1d1	94	77.333	Poecilia_mexicana
ENSPREG00000016619	rsl1d1	60	45.690	ENSPPYG00000019335	-	52	45.690	Pongo_abelii
ENSPREG00000016619	rsl1d1	61	45.339	ENSPCOG00000022456	RSL1D1	65	43.411	Propithecus_coquereli
ENSPREG00000016619	rsl1d1	76	62.783	ENSPNYG00000002850	rsl1d1	98	56.757	Pundamilia_nyererei
ENSPREG00000016619	rsl1d1	77	53.651	ENSPNAG00000011848	rsl1d1	84	54.603	Pygocentrus_nattereri
ENSPREG00000016619	rsl1d1	62	47.899	ENSRNOG00000048608	Rsl1d1l1	51	48.305	Rattus_norvegicus
ENSPREG00000016619	rsl1d1	62	47.899	ENSRNOG00000061236	LOC108348298	51	48.305	Rattus_norvegicus
ENSPREG00000016619	rsl1d1	61	49.576	ENSSBOG00000035910	-	51	48.638	Saimiri_boliviensis_boliviensis
ENSPREG00000016619	rsl1d1	66	54.580	ENSSFOG00015011354	rsl1d1	76	54.580	Scleropages_formosus
ENSPREG00000016619	rsl1d1	75	66.212	ENSSMAG00000007957	rsl1d1	93	60.167	Scophthalmus_maximus
ENSPREG00000016619	rsl1d1	76	65.333	ENSSDUG00000008447	rsl1d1	90	56.499	Seriola_dumerili
ENSPREG00000016619	rsl1d1	96	57.441	ENSSLDG00000008293	rsl1d1	96	56.915	Seriola_lalandi_dorsalis
ENSPREG00000016619	rsl1d1	75	46.894	ENSSPUG00000007525	RSL1D1	71	46.584	Sphenodon_punctatus
ENSPREG00000016619	rsl1d1	96	53.571	ENSSPAG00000009755	rsl1d1	96	54.499	Stegastes_partitus
ENSPREG00000016619	rsl1d1	61	50.424	ENSSSCG00000023984	RSL1D1	51	48.617	Sus_scrofa
ENSPREG00000016619	rsl1d1	62	55.274	ENSTGUG00000005174	RSL1D1	96	55.274	Taeniopygia_guttata
ENSPREG00000016619	rsl1d1	96	53.600	ENSTRUG00000016970	rsl1d1	97	53.495	Takifugu_rubripes
ENSPREG00000016619	rsl1d1	96	54.787	ENSTNIG00000012925	rsl1d1	97	54.255	Tetraodon_nigroviridis
ENSPREG00000016619	rsl1d1	61	50.847	ENSTTRG00000011629	RSL1D1	50	50.847	Tursiops_truncatus
ENSPREG00000016619	rsl1d1	76	41.768	ENSUAMG00000004470	RSL1D1	52	49.020	Ursus_americanus
ENSPREG00000016619	rsl1d1	76	38.728	ENSVVUG00000018170	-	52	45.136	Vulpes_vulpes
ENSPREG00000016619	rsl1d1	76	35.435	ENSVVUG00000024962	-	53	40.078	Vulpes_vulpes
ENSPREG00000016619	rsl1d1	76	47.468	ENSXETG00000033365	-	70	47.756	Xenopus_tropicalis
ENSPREG00000016619	rsl1d1	63	84.810	ENSXCOG00000003117	rsl1d1	100	84.810	Xiphophorus_couchianus
ENSPREG00000016619	rsl1d1	61	88.559	ENSXMAG00000025111	rsl1d1	68	88.559	Xiphophorus_maculatus