EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000016652 (Gene tree)
Gene ID: 103465080
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 13362 bases
Position: chrLG5:15729102-15742463
Accession: 103465080
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000024816	RRM_1	PF00076.22	8.2e-17	1	1
ENSPREP00000024728	RRM_1	PF00076.22	1e-16	1	1
ENSPREP00000024772	RRM_1	PF00076.22	1.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000024976	-	726	-	ENSPREP00000024728	241 (aa)	-	-
ENSPRET00000025019	-	759	XM_008409631	ENSPREP00000024772	252 (aa)	XP_008407853	-
ENSPRET00000025064	-	651	-	ENSPREP00000024816	216 (aa)	-	-

Gene Model

Click here to download ENSPREG00000016652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000016652's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000016652	-	82	66.495	ENSPREG00000007414	rbm24a	98	63.203
ENSPREG00000016652	-	69	74.839	ENSPREG00000000762	rbm24b	98	65.254
ENSPREG00000016652	-	100	60.166	ENSPREG00000007398	rbm38	98	60.920

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000016652	-	69	76.510	ENSG00000112183	RBM24	98	82.051	Homo_sapiens
ENSPREG00000016652	-	97	63.596	ENSAPOG00000019514	rbm24a	98	64.474	Acanthochromis_polyacanthus
ENSPREG00000016652	-	69	74.510	ENSAPOG00000000789	rbm24b	98	65.086	Acanthochromis_polyacanthus
ENSPREG00000016652	-	69	69.281	ENSACIG00000015650	rbm24b	98	61.638	Amphilophus_citrinellus
ENSPREG00000016652	-	97	63.158	ENSACIG00000010987	rbm24a	98	64.912	Amphilophus_citrinellus
ENSPREG00000016652	-	69	74.510	ENSAOCG00000023764	rbm24b	98	65.086	Amphiprion_ocellaris
ENSPREG00000016652	-	97	63.596	ENSAOCG00000000378	rbm24a	98	64.474	Amphiprion_ocellaris
ENSPREG00000016652	-	69	74.510	ENSAPEG00000010059	rbm24b	98	65.086	Amphiprion_percula
ENSPREG00000016652	-	97	63.596	ENSAPEG00000012234	rbm24a	98	64.474	Amphiprion_percula
ENSPREG00000016652	-	61	80.153	ENSATEG00000014195	rbm24a	98	64.629	Anabas_testudineus
ENSPREG00000016652	-	69	74.510	ENSATEG00000005396	rbm24b	98	64.655	Anabas_testudineus
ENSPREG00000016652	-	69	77.181	ENSACAG00000003962	RBM24	98	67.105	Anolis_carolinensis
ENSPREG00000016652	-	69	76.510	ENSANAG00000029310	RBM24	98	64.957	Aotus_nancymaae
ENSPREG00000016652	-	69	73.203	ENSACLG00000004207	rbm24b	98	63.793	Astatotilapia_calliptera
ENSPREG00000016652	-	97	62.771	ENSACLG00000016929	rbm24a	98	64.502	Astatotilapia_calliptera
ENSPREG00000016652	-	69	74.000	ENSAMXG00000040572	rbm24a	98	65.487	Astyanax_mexicanus
ENSPREG00000016652	-	69	76.000	ENSBTAG00000015396	RBM24	98	64.957	Bos_taurus
ENSPREG00000016652	-	69	76.510	ENSCJAG00000006579	RBM24	98	64.957	Callithrix_jacchus
ENSPREG00000016652	-	52	75.000	ENSCAFG00000009942	-	97	75.000	Canis_familiaris
ENSPREG00000016652	-	69	74.834	ENSCAFG00020012640	RBM24	98	64.255	Canis_lupus_dingo
ENSPREG00000016652	-	69	68.456	ENSCHIG00000013536	RBM24	98	60.526	Capra_hircus
ENSPREG00000016652	-	51	71.429	ENSTSYG00000031245	RBM24	82	60.204	Carlito_syrichta
ENSPREG00000016652	-	69	76.510	ENSCPOG00000038459	RBM24	98	64.957	Cavia_porcellus
ENSPREG00000016652	-	69	76.000	ENSCCAG00000030791	RBM24	91	64.957	Cebus_capucinus
ENSPREG00000016652	-	69	76.000	ENSCATG00000010509	RBM24	92	64.957	Cercocebus_atys
ENSPREG00000016652	-	69	76.510	ENSCLAG00000002136	RBM24	98	64.957	Chinchilla_lanigera
ENSPREG00000016652	-	69	76.510	ENSCSAG00000007599	RBM24	98	64.957	Chlorocebus_sabaeus
ENSPREG00000016652	-	69	75.839	ENSCPBG00000008291	RBM24	98	66.071	Chrysemys_picta_bellii
ENSPREG00000016652	-	69	76.000	ENSCANG00000030245	RBM24	92	64.957	Colobus_angolensis_palliatus
ENSPREG00000016652	-	69	77.181	ENSCGRG00001010535	Rbm24	98	64.957	Cricetulus_griseus_chok1gshd
ENSPREG00000016652	-	69	77.181	ENSCGRG00000011732	Rbm24	98	64.957	Cricetulus_griseus_crigri
ENSPREG00000016652	-	69	71.795	ENSCSEG00000004378	rbm24b	89	61.538	Cynoglossus_semilaevis
ENSPREG00000016652	-	69	74.834	ENSCSEG00000017958	rbm24a	98	65.502	Cynoglossus_semilaevis
ENSPREG00000016652	-	69	74.839	ENSCVAG00000011805	rbm24b	98	65.254	Cyprinodon_variegatus
ENSPREG00000016652	-	82	67.188	ENSCVAG00000020675	rbm24a	98	64.474	Cyprinodon_variegatus
ENSPREG00000016652	-	58	77.519	ENSDARG00000031809	rbm24b	91	77.519	Danio_rerio
ENSPREG00000016652	-	69	74.667	ENSDARG00000102995	rbm24a	97	83.929	Danio_rerio
ENSPREG00000016652	-	69	76.510	ENSDORG00000028400	Rbm24	98	64.957	Dipodomys_ordii
ENSPREG00000016652	-	84	63.536	ENSEBUG00000003787	-	87	63.536	Eptatretus_burgeri
ENSPREG00000016652	-	62	72.593	ENSEBUG00000008945	rbm24a	69	72.593	Eptatretus_burgeri
ENSPREG00000016652	-	69	76.510	ENSEASG00005011789	RBM24	98	64.957	Equus_asinus_asinus
ENSPREG00000016652	-	69	76.510	ENSECAG00000009819	RBM24	98	64.957	Equus_caballus
ENSPREG00000016652	-	97	60.352	ENSELUG00000007163	rbm24a	98	67.401	Esox_lucius
ENSPREG00000016652	-	60	80.769	ENSELUG00000002970	-	97	65.652	Esox_lucius
ENSPREG00000016652	-	69	76.510	ENSFCAG00000046251	RBM24	98	64.957	Felis_catus
ENSPREG00000016652	-	71	76.282	ENSFALG00000013398	RBM24	64	75.796	Ficedula_albicollis
ENSPREG00000016652	-	69	49.677	ENSFHEG00000015627	rbm24b	98	49.153	Fundulus_heteroclitus
ENSPREG00000016652	-	82	66.154	ENSFHEG00000013449	rbm24a	98	64.069	Fundulus_heteroclitus
ENSPREG00000016652	-	54	52.991	ENSGMOG00000016348	-	100	52.991	Gadus_morhua
ENSPREG00000016652	-	82	67.742	ENSGMOG00000007015	rbm24b	99	63.393	Gadus_morhua
ENSPREG00000016652	-	61	79.389	ENSGMOG00000010412	rbm24a	65	75.524	Gadus_morhua
ENSPREG00000016652	-	69	76.510	ENSGALG00000012712	RBM24	98	68.018	Gallus_gallus
ENSPREG00000016652	-	69	74.839	ENSGAFG00000006003	rbm24b	98	65.254	Gambusia_affinis
ENSPREG00000016652	-	100	57.983	ENSGAFG00000013304	-	100	60.246	Gambusia_affinis
ENSPREG00000016652	-	79	68.681	ENSGAFG00000010968	rbm24a	98	62.771	Gambusia_affinis
ENSPREG00000016652	-	100	97.619	ENSGAFG00000020326	-	100	97.619	Gambusia_affinis
ENSPREG00000016652	-	81	63.861	ENSGACG00000005383	rbm24a	98	65.158	Gasterosteus_aculeatus
ENSPREG00000016652	-	97	64.574	ENSGACG00000008472	rbm24b	98	64.574	Gasterosteus_aculeatus
ENSPREG00000016652	-	69	76.510	ENSGAGG00000016571	RBM24	98	66.518	Gopherus_agassizii
ENSPREG00000016652	-	69	76.000	ENSGGOG00000039093	RBM24	92	64.957	Gorilla_gorilla
ENSPREG00000016652	-	69	73.203	ENSHBUG00000017155	rbm24b	98	63.793	Haplochromis_burtoni
ENSPREG00000016652	-	97	62.771	ENSHBUG00000003071	rbm24a	98	64.502	Haplochromis_burtoni
ENSPREG00000016652	-	69	75.839	ENSHGLG00000008335	RBM24	98	64.530	Heterocephalus_glaber_female
ENSPREG00000016652	-	69	73.248	ENSHCOG00000000137	rbm24b	99	64.286	Hippocampus_comes
ENSPREG00000016652	-	52	83.929	ENSHCOG00000019356	rbm24a	97	83.929	Hippocampus_comes
ENSPREG00000016652	-	69	73.684	ENSIPUG00000014727	rbm24	98	64.069	Ictalurus_punctatus
ENSPREG00000016652	-	69	76.510	ENSSTOG00000022090	RBM24	98	64.957	Ictidomys_tridecemlineatus
ENSPREG00000016652	-	69	77.181	ENSJJAG00000021705	Rbm24	98	64.957	Jaculus_jaculus
ENSPREG00000016652	-	82	65.803	ENSKMAG00000006314	rbm24a	98	63.755	Kryptolebias_marmoratus
ENSPREG00000016652	-	85	92.350	ENSKMAG00000006096	-	76	92.500	Kryptolebias_marmoratus
ENSPREG00000016652	-	52	84.821	ENSKMAG00000014458	rbm24b	53	84.821	Kryptolebias_marmoratus
ENSPREG00000016652	-	69	74.026	ENSLBEG00000000774	rbm24b	98	66.524	Labrus_bergylta
ENSPREG00000016652	-	61	80.153	ENSLBEG00000003025	rbm24a	98	64.629	Labrus_bergylta
ENSPREG00000016652	-	69	75.497	ENSLACG00000011111	RBM24	98	65.217	Latimeria_chalumnae
ENSPREG00000016652	-	70	73.856	ENSLOCG00000006244	rbm24a	98	65.639	Lepisosteus_oculatus
ENSPREG00000016652	-	97	62.389	ENSLAFG00000000116	RBM24	98	66.372	Loxodonta_africana
ENSPREG00000016652	-	69	76.510	ENSMFAG00000034396	RBM24	98	64.957	Macaca_fascicularis
ENSPREG00000016652	-	69	76.510	ENSMMUG00000011384	RBM24	98	82.051	Macaca_mulatta
ENSPREG00000016652	-	69	76.000	ENSMNEG00000040710	RBM24	92	64.957	Macaca_nemestrina
ENSPREG00000016652	-	69	74.675	ENSMAMG00000012841	rbm24b	98	64.502	Mastacembelus_armatus
ENSPREG00000016652	-	61	80.153	ENSMAMG00000013172	rbm24a	98	64.629	Mastacembelus_armatus
ENSPREG00000016652	-	97	62.771	ENSMZEG00005004491	rbm24a	98	64.502	Maylandia_zebra
ENSPREG00000016652	-	69	73.203	ENSMZEG00005014397	rbm24b	98	63.793	Maylandia_zebra
ENSPREG00000016652	-	69	77.181	ENSMAUG00000011281	Rbm24	98	64.957	Mesocricetus_auratus
ENSPREG00000016652	-	69	76.000	ENSMICG00000032332	RBM24	91	67.401	Microcebus_murinus
ENSPREG00000016652	-	69	77.181	ENSMOCG00000016637	Rbm24	98	64.957	Microtus_ochrogaster
ENSPREG00000016652	-	69	74.510	ENSMMOG00000001750	rbm24b	88	82.609	Mola_mola
ENSPREG00000016652	-	61	80.153	ENSMMOG00000019054	rbm24a	63	80.153	Mola_mola
ENSPREG00000016652	-	69	75.839	ENSMODG00000010899	RBM24	89	64.807	Monodelphis_domestica
ENSPREG00000016652	-	69	73.856	ENSMALG00000011585	rbm24b	98	64.655	Monopterus_albus
ENSPREG00000016652	-	69	74.172	ENSMALG00000014068	rbm24a	70	73.457	Monopterus_albus
ENSPREG00000016652	-	69	77.181	MGP_CAROLIEiJ_G0018481	Rbm24	98	64.957	Mus_caroli
ENSPREG00000016652	-	69	77.181	ENSMUSG00000038132	Rbm24	98	64.957	Mus_musculus
ENSPREG00000016652	-	69	77.181	MGP_PahariEiJ_G0019548	Rbm24	98	64.957	Mus_pahari
ENSPREG00000016652	-	69	77.181	MGP_SPRETEiJ_G0019360	Rbm24	98	64.957	Mus_spretus
ENSPREG00000016652	-	69	77.181	ENSNGAG00000013939	Rbm24	98	64.957	Nannospalax_galili
ENSPREG00000016652	-	97	62.771	ENSNBRG00000012347	rbm24a	98	64.502	Neolamprologus_brichardi
ENSPREG00000016652	-	69	73.203	ENSNBRG00000015853	rbm24b	98	63.793	Neolamprologus_brichardi
ENSPREG00000016652	-	69	76.000	ENSNLEG00000001075	RBM24	97	71.354	Nomascus_leucogenys
ENSPREG00000016652	-	69	51.007	ENSMEUG00000015492	RBM24	98	48.927	Notamacropus_eugenii
ENSPREG00000016652	-	69	62.252	ENSOPRG00000012150	-	99	55.932	Ochotona_princeps
ENSPREG00000016652	-	69	76.510	ENSODEG00000006411	RBM24	98	64.957	Octodon_degus
ENSPREG00000016652	-	69	73.856	ENSONIG00000003010	rbm24b	98	64.655	Oreochromis_niloticus
ENSPREG00000016652	-	97	62.609	ENSONIG00000002504	rbm24a	93	64.348	Oreochromis_niloticus
ENSPREG00000016652	-	72	74.684	ENSOANG00000011865	RBM24	93	74.684	Ornithorhynchus_anatinus
ENSPREG00000016652	-	61	80.153	ENSORLG00000012546	rbm24a	98	65.066	Oryzias_latipes
ENSPREG00000016652	-	69	74.839	ENSORLG00000007916	rbm24b	98	65.665	Oryzias_latipes
ENSPREG00000016652	-	61	80.153	ENSORLG00020005859	rbm24a	98	65.066	Oryzias_latipes_hni
ENSPREG00000016652	-	69	74.839	ENSORLG00020014541	rbm24b	98	65.665	Oryzias_latipes_hni
ENSPREG00000016652	-	61	80.153	ENSORLG00015013567	rbm24a	98	65.351	Oryzias_latipes_hsok
ENSPREG00000016652	-	69	74.839	ENSORLG00015000583	rbm24b	98	65.665	Oryzias_latipes_hsok
ENSPREG00000016652	-	69	73.718	ENSOMEG00000021525	rbm24b	98	64.957	Oryzias_melastigma
ENSPREG00000016652	-	61	80.153	ENSOMEG00000011760	rbm24a	98	63.755	Oryzias_melastigma
ENSPREG00000016652	-	69	76.510	ENSOGAG00000027311	RBM24	98	64.957	Otolemur_garnettii
ENSPREG00000016652	-	69	76.510	ENSPPRG00000005000	RBM24	98	64.957	Panthera_pardus
ENSPREG00000016652	-	69	76.000	ENSPTRG00000017749	RBM24	91	64.957	Pan_troglodytes
ENSPREG00000016652	-	69	76.510	ENSPANG00000033323	RBM24	98	64.957	Papio_anubis
ENSPREG00000016652	-	82	65.445	ENSPKIG00000019760	-	83	68.063	Paramormyrops_kingsleyae
ENSPREG00000016652	-	99	61.304	ENSPKIG00000001701	rbm24a	98	65.929	Paramormyrops_kingsleyae
ENSPREG00000016652	-	69	75.839	ENSPSIG00000006920	RBM24	98	66.228	Pelodiscus_sinensis
ENSPREG00000016652	-	52	83.929	ENSPMGG00000001730	rbm24a	97	83.929	Periophthalmus_magnuspinnatus
ENSPREG00000016652	-	69	74.194	ENSPMGG00000011993	rbm24b	83	85.321	Periophthalmus_magnuspinnatus
ENSPREG00000016652	-	98	55.696	ENSPMAG00000005910	rbm24a	96	57.265	Petromyzon_marinus
ENSPREG00000016652	-	69	75.839	ENSPCIG00000029674	RBM24	98	64.807	Phascolarctos_cinereus
ENSPREG00000016652	-	100	98.419	ENSPFOG00000005096	-	100	98.419	Poecilia_formosa
ENSPREG00000016652	-	97	62.174	ENSPFOG00000013132	rbm24a	98	63.478	Poecilia_formosa
ENSPREG00000016652	-	96	61.842	ENSPLAG00000006542	rbm24a	91	63.158	Poecilia_latipinna
ENSPREG00000016652	-	69	74.839	ENSPLAG00000019473	rbm24b	98	65.254	Poecilia_latipinna
ENSPREG00000016652	-	69	74.839	ENSPMEG00000009382	-	99	64.979	Poecilia_mexicana
ENSPREG00000016652	-	100	97.222	ENSPMEG00000020921	-	100	97.222	Poecilia_mexicana
ENSPREG00000016652	-	97	62.174	ENSPMEG00000021740	rbm24a	98	63.478	Poecilia_mexicana
ENSPREG00000016652	-	69	74.839	ENSPMEG00000022792	rbm24b	99	64.979	Poecilia_mexicana
ENSPREG00000016652	-	69	76.510	ENSPPYG00000016256	RBM24	98	64.957	Pongo_abelii
ENSPREG00000016652	-	69	76.510	ENSPCAG00000015152	RBM24	98	64.681	Procavia_capensis
ENSPREG00000016652	-	69	76.510	ENSPCOG00000015077	RBM24	98	64.957	Propithecus_coquereli
ENSPREG00000016652	-	69	76.510	ENSPVAG00000004954	RBM24	98	64.957	Pteropus_vampyrus
ENSPREG00000016652	-	69	73.203	ENSPNYG00000015684	rbm24b	98	63.793	Pundamilia_nyererei
ENSPREG00000016652	-	97	62.771	ENSPNYG00000011118	rbm24a	98	64.502	Pundamilia_nyererei
ENSPREG00000016652	-	69	74.000	ENSPNAG00000003816	rbm24a	98	65.351	Pygocentrus_nattereri
ENSPREG00000016652	-	97	65.487	ENSPNAG00000018604	rbm24b	98	67.257	Pygocentrus_nattereri
ENSPREG00000016652	-	69	76.000	ENSRNOG00000046547	Rbm24	99	64.255	Rattus_norvegicus
ENSPREG00000016652	-	69	76.510	ENSRBIG00000044451	RBM24	98	64.957	Rhinopithecus_bieti
ENSPREG00000016652	-	69	76.510	ENSRROG00000029486	RBM24	98	64.957	Rhinopithecus_roxellana
ENSPREG00000016652	-	69	76.510	ENSSBOG00000030002	RBM24	98	64.957	Saimiri_boliviensis_boliviensis
ENSPREG00000016652	-	69	75.839	ENSSHAG00000016729	RBM24	91	64.807	Sarcophilus_harrisii
ENSPREG00000016652	-	97	52.018	ENSSFOG00015000915	rbm24b	77	58.621	Scleropages_formosus
ENSPREG00000016652	-	97	74.641	ENSSFOG00015020384	-	97	75.120	Scleropages_formosus
ENSPREG00000016652	-	61	80.153	ENSSFOG00015011094	rbm24a	58	80.153	Scleropages_formosus
ENSPREG00000016652	-	69	73.377	ENSSMAG00000020117	rbm24b	84	63.519	Scophthalmus_maximus
ENSPREG00000016652	-	61	80.153	ENSSMAG00000008449	rbm24a	98	64.348	Scophthalmus_maximus
ENSPREG00000016652	-	69	75.163	ENSSDUG00000005955	rbm24b	98	65.086	Seriola_dumerili
ENSPREG00000016652	-	61	80.153	ENSSDUG00000010760	rbm24a	98	64.912	Seriola_dumerili
ENSPREG00000016652	-	69	73.856	ENSSLDG00000015378	rbm24b	98	64.224	Seriola_lalandi_dorsalis
ENSPREG00000016652	-	61	80.153	ENSSLDG00000012657	rbm24a	98	64.912	Seriola_lalandi_dorsalis
ENSPREG00000016652	-	69	75.839	ENSSPUG00000016665	RBM24	98	66.520	Sphenodon_punctatus
ENSPREG00000016652	-	97	63.596	ENSSPAG00000014990	rbm24a	98	64.474	Stegastes_partitus
ENSPREG00000016652	-	69	74.510	ENSSPAG00000007941	rbm24b	98	65.086	Stegastes_partitus
ENSPREG00000016652	-	69	76.000	ENSSSCG00000038455	RBM24	98	64.957	Sus_scrofa
ENSPREG00000016652	-	69	76.510	ENSTGUG00000005984	RBM24	98	67.265	Taeniopygia_guttata
ENSPREG00000016652	-	69	73.856	ENSTRUG00000014826	rbm24b	98	65.948	Takifugu_rubripes
ENSPREG00000016652	-	69	72.848	ENSTRUG00000010089	rbm24a	98	64.192	Takifugu_rubripes
ENSPREG00000016652	-	97	65.179	ENSTNIG00000018417	rbm24b	98	66.964	Tetraodon_nigroviridis
ENSPREG00000016652	-	97	63.380	ENSTNIG00000009181	rbm24a	98	62.385	Tetraodon_nigroviridis
ENSPREG00000016652	-	98	58.182	ENSTNIG00000012600	-	97	58.768	Tetraodon_nigroviridis
ENSPREG00000016652	-	69	76.000	ENSTTRG00000000393	RBM24	98	64.681	Tursiops_truncatus
ENSPREG00000016652	-	69	77.027	ENSXETG00000024618	rbm24	97	68.304	Xenopus_tropicalis
ENSPREG00000016652	-	82	66.495	ENSXCOG00000020100	rbm24a	98	63.203	Xiphophorus_couchianus
ENSPREG00000016652	-	69	74.839	ENSXCOG00000019779	rbm24b	98	65.254	Xiphophorus_couchianus
ENSPREG00000016652	-	69	74.839	ENSXMAG00000014017	rbm24b	98	65.254	Xiphophorus_maculatus
ENSPREG00000016652	-	100	97.619	ENSXMAG00000028579	-	100	97.619	Xiphophorus_maculatus
ENSPREG00000016652	-	82	66.495	ENSXMAG00000029809	rbm24a	98	63.203	Xiphophorus_maculatus