EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000016973 (Gene tree)
Gene ID: 103460453
Gene Symbol: ythdc1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 8645 bases
Position: chrKK215301.1:127342-135986
Accession: 103460453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000025211	YTH	PF04146.15	6.6e-41	1	1
ENSPREP00000025175	YTH	PF04146.15	6.6e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000025463	-	1806	-	ENSPREP00000025211	601 (aa)	-	-
ENSPRET00000025425	-	1809	XM_017303314	ENSPREP00000025175	602 (aa)	XP_017158803	-

Gene Model

Click here to download ENSPREG00000016973's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000016973's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000016973	ythdc1	59	60.050	ENSG00000083896	YTHDC1	57	59.712	Homo_sapiens
ENSPREG00000016973	ythdc1	93	78.246	ENSAPOG00000013997	ythdc1	93	78.342	Acanthochromis_polyacanthus
ENSPREG00000016973	ythdc1	59	58.654	ENSAMEG00000005688	YTHDC1	70	59.952	Ailuropoda_melanoleuca
ENSPREG00000016973	ythdc1	60	77.573	ENSACIG00000019728	ythdc1	62	82.873	Amphilophus_citrinellus
ENSPREG00000016973	ythdc1	90	81.541	ENSAOCG00000000239	ythdc1	82	81.362	Amphiprion_ocellaris
ENSPREG00000016973	ythdc1	90	81.362	ENSAPEG00000000618	ythdc1	88	81.362	Amphiprion_percula
ENSPREG00000016973	ythdc1	90	80.289	ENSATEG00000023007	ythdc1	90	80.289	Anabas_testudineus
ENSPREG00000016973	ythdc1	91	51.524	ENSAPLG00000009921	YTHDC1	60	60.096	Anas_platyrhynchos
ENSPREG00000016973	ythdc1	93	50.673	ENSACAG00000009697	YTHDC1	67	65.079	Anolis_carolinensis
ENSPREG00000016973	ythdc1	59	60.050	ENSANAG00000001522	YTHDC1	70	59.135	Aotus_nancymaae
ENSPREG00000016973	ythdc1	90	81.362	ENSACLG00000019371	ythdc1	94	67.963	Astatotilapia_calliptera
ENSPREG00000016973	ythdc1	93	58.307	ENSAMXG00000006978	ythdc1	57	67.848	Astyanax_mexicanus
ENSPREG00000016973	ythdc1	59	57.933	ENSBTAG00000015572	YTHDC1	65	71.429	Bos_taurus
ENSPREG00000016973	ythdc1	59	60.050	ENSCJAG00000009934	YTHDC1	70	59.135	Callithrix_jacchus
ENSPREG00000016973	ythdc1	59	58.654	ENSCAFG00000002821	YTHDC1	70	59.952	Canis_familiaris
ENSPREG00000016973	ythdc1	59	58.654	ENSCAFG00020027112	YTHDC1	70	59.952	Canis_lupus_dingo
ENSPREG00000016973	ythdc1	59	54.198	ENSCHIG00000004810	YTHDC1	60	68.519	Capra_hircus
ENSPREG00000016973	ythdc1	59	60.050	ENSTSYG00000011668	YTHDC1	71	59.135	Carlito_syrichta
ENSPREG00000016973	ythdc1	90	39.344	ENSCAPG00000008722	YTHDC1	61	50.704	Cavia_aperea
ENSPREG00000016973	ythdc1	56	61.582	ENSCPOG00000010929	YTHDC1	63	71.429	Cavia_porcellus
ENSPREG00000016973	ythdc1	59	60.050	ENSCCAG00000035754	YTHDC1	71	59.135	Cebus_capucinus
ENSPREG00000016973	ythdc1	76	51.521	ENSCATG00000036320	YTHDC1	68	63.370	Cercocebus_atys
ENSPREG00000016973	ythdc1	58	59.606	ENSCLAG00000005482	YTHDC1	65	67.925	Chinchilla_lanigera
ENSPREG00000016973	ythdc1	59	58.413	ENSCSAG00000005252	YTHDC1	57	59.712	Chlorocebus_sabaeus
ENSPREG00000016973	ythdc1	92	54.313	ENSCPBG00000021965	YTHDC1	65	63.158	Chrysemys_picta_bellii
ENSPREG00000016973	ythdc1	76	51.331	ENSCANG00000004769	YTHDC1	67	63.370	Colobus_angolensis_palliatus
ENSPREG00000016973	ythdc1	93	49.849	ENSCGRG00001000816	Ythdc1	71	57.783	Cricetulus_griseus_chok1gshd
ENSPREG00000016973	ythdc1	91	49.555	ENSCGRG00000009807	Ythdc1	70	58.894	Cricetulus_griseus_crigri
ENSPREG00000016973	ythdc1	90	78.495	ENSCSEG00000020404	ythdc1	94	67.551	Cynoglossus_semilaevis
ENSPREG00000016973	ythdc1	54	91.950	ENSCVAG00000022349	ythdc1	94	67.919	Cyprinodon_variegatus
ENSPREG00000016973	ythdc1	93	58.675	ENSDARG00000051953	ythdc1	58	66.076	Danio_rerio
ENSPREG00000016973	ythdc1	93	50.810	ENSDNOG00000004949	YTHDC1	71	59.135	Dasypus_novemcinctus
ENSPREG00000016973	ythdc1	59	60.050	ENSDORG00000013045	Ythdc1	65	67.925	Dipodomys_ordii
ENSPREG00000016973	ythdc1	57	67.532	ENSETEG00000001878	YTHDC1	51	80.000	Echinops_telfairi
ENSPREG00000016973	ythdc1	61	39.111	ENSEBUG00000013696	ythdc1	71	38.695	Eptatretus_burgeri
ENSPREG00000016973	ythdc1	59	58.654	ENSEASG00005018383	YTHDC1	77	59.952	Equus_asinus_asinus
ENSPREG00000016973	ythdc1	74	57.882	ENSECAG00000018303	YTHDC1	65	71.429	Equus_caballus
ENSPREG00000016973	ythdc1	59	58.654	ENSEEUG00000015466	YTHDC1	71	59.135	Erinaceus_europaeus
ENSPREG00000016973	ythdc1	93	57.251	ENSELUG00000014029	ythdc1	51	72.566	Esox_lucius
ENSPREG00000016973	ythdc1	59	60.302	ENSFCAG00000026791	YTHDC1	78	59.952	Felis_catus
ENSPREG00000016973	ythdc1	77	63.333	ENSFALG00000006581	YTHDC1	84	63.510	Ficedula_albicollis
ENSPREG00000016973	ythdc1	59	59.799	ENSFDAG00000018560	YTHDC1	70	58.894	Fukomys_damarensis
ENSPREG00000016973	ythdc1	96	64.696	ENSFHEG00000001286	ythdc1	75	78.333	Fundulus_heteroclitus
ENSPREG00000016973	ythdc1	63	81.166	ENSGMOG00000018815	ythdc1	78	81.166	Gadus_morhua
ENSPREG00000016973	ythdc1	91	51.415	ENSGALG00000035906	YTHDC1	54	61.307	Gallus_gallus
ENSPREG00000016973	ythdc1	76	83.406	ENSGAFG00000001759	ythdc1	55	99.197	Gambusia_affinis
ENSPREG00000016973	ythdc1	93	67.629	ENSGACG00000015486	ythdc1	57	73.697	Gasterosteus_aculeatus
ENSPREG00000016973	ythdc1	93	53.492	ENSGAGG00000007108	YTHDC1	68	61.905	Gopherus_agassizii
ENSPREG00000016973	ythdc1	76	51.613	ENSGGOG00000021958	YTHDC1	58	58.588	Gorilla_gorilla
ENSPREG00000016973	ythdc1	90	81.541	ENSHBUG00000019288	ythdc1	94	68.118	Haplochromis_burtoni
ENSPREG00000016973	ythdc1	61	45.783	ENSHGLG00000003239	-	56	45.721	Heterocephalus_glaber_female
ENSPREG00000016973	ythdc1	56	60.202	ENSHGLG00000006319	-	71	57.783	Heterocephalus_glaber_female
ENSPREG00000016973	ythdc1	94	42.587	ENSHGLG00100008060	-	57	43.447	Heterocephalus_glaber_male
ENSPREG00000016973	ythdc1	56	58.853	ENSHGLG00100001556	-	71	57.619	Heterocephalus_glaber_male
ENSPREG00000016973	ythdc1	71	69.010	ENSHCOG00000001520	ythdc1	88	70.175	Hippocampus_comes
ENSPREG00000016973	ythdc1	93	58.136	ENSIPUG00000018136	ythdc1	58	66.835	Ictalurus_punctatus
ENSPREG00000016973	ythdc1	59	58.867	ENSSTOG00000013652	YTHDC1	57	58.588	Ictidomys_tridecemlineatus
ENSPREG00000016973	ythdc1	59	60.050	ENSJJAG00000010268	Ythdc1	71	58.019	Jaculus_jaculus
ENSPREG00000016973	ythdc1	54	90.769	ENSKMAG00000006483	ythdc1	85	73.786	Kryptolebias_marmoratus
ENSPREG00000016973	ythdc1	67	91.111	ENSLBEG00000020831	ythdc1	73	91.111	Labrus_bergylta
ENSPREG00000016973	ythdc1	55	62.827	ENSLACG00000004893	YTHDC1	60	59.189	Latimeria_chalumnae
ENSPREG00000016973	ythdc1	93	55.259	ENSLOCG00000003045	ythdc1	62	61.985	Lepisosteus_oculatus
ENSPREG00000016973	ythdc1	88	53.299	ENSLAFG00000021592	YTHDC1	70	59.434	Loxodonta_africana
ENSPREG00000016973	ythdc1	76	51.331	ENSMFAG00000031927	YTHDC1	67	63.370	Macaca_fascicularis
ENSPREG00000016973	ythdc1	59	60.050	ENSMMUG00000002265	YTHDC1	70	59.135	Macaca_mulatta
ENSPREG00000016973	ythdc1	76	51.331	ENSMNEG00000033751	YTHDC1	67	63.370	Macaca_nemestrina
ENSPREG00000016973	ythdc1	76	51.331	ENSMLEG00000042147	YTHDC1	67	63.370	Mandrillus_leucophaeus
ENSPREG00000016973	ythdc1	53	91.304	ENSMAMG00000013122	ythdc1	92	69.136	Mastacembelus_armatus
ENSPREG00000016973	ythdc1	90	81.362	ENSMZEG00005023173	ythdc1	94	67.963	Maylandia_zebra
ENSPREG00000016973	ythdc1	93	50.901	ENSMGAG00000010391	YTHDC1	59	58.696	Meleagris_gallopavo
ENSPREG00000016973	ythdc1	93	49.698	ENSMAUG00000001286	Ythdc1	56	60.302	Mesocricetus_auratus
ENSPREG00000016973	ythdc1	93	50.363	ENSMICG00000034640	YTHDC1	71	59.615	Microcebus_murinus
ENSPREG00000016973	ythdc1	59	59.799	ENSMOCG00000020201	Ythdc1	58	58.353	Microtus_ochrogaster
ENSPREG00000016973	ythdc1	93	68.709	ENSMMOG00000021200	ythdc1	93	66.881	Mola_mola
ENSPREG00000016973	ythdc1	93	52.352	ENSMODG00000020754	-	59	60.192	Monodelphis_domestica
ENSPREG00000016973	ythdc1	65	45.316	ENSMODG00000009173	-	74	51.297	Monodelphis_domestica
ENSPREG00000016973	ythdc1	99	41.467	ENSMODG00000014337	-	59	59.028	Monodelphis_domestica
ENSPREG00000016973	ythdc1	95	38.227	ENSMODG00000010076	-	63	53.754	Monodelphis_domestica
ENSPREG00000016973	ythdc1	90	79.821	ENSMALG00000013412	ythdc1	92	78.417	Monopterus_albus
ENSPREG00000016973	ythdc1	59	59.799	MGP_CAROLIEiJ_G0027347	Ythdc1	68	63.004	Mus_caroli
ENSPREG00000016973	ythdc1	61	59.314	ENSMUSG00000035851	Ythdc1	70	58.894	Mus_musculus
ENSPREG00000016973	ythdc1	61	59.314	MGP_PahariEiJ_G0017126	Ythdc1	70	58.894	Mus_pahari
ENSPREG00000016973	ythdc1	61	59.314	MGP_SPRETEiJ_G0028339	Ythdc1	71	58.894	Mus_spretus
ENSPREG00000016973	ythdc1	74	63.830	ENSMPUG00000001743	YTHDC1	59	71.429	Mustela_putorius_furo
ENSPREG00000016973	ythdc1	59	58.413	ENSMLUG00000016300	YTHDC1	58	59.712	Myotis_lucifugus
ENSPREG00000016973	ythdc1	67	85.152	ENSNBRG00000007663	ythdc1	91	74.713	Neolamprologus_brichardi
ENSPREG00000016973	ythdc1	76	51.238	ENSNLEG00000009202	YTHDC1	57	57.882	Nomascus_leucogenys
ENSPREG00000016973	ythdc1	57	62.252	ENSOPRG00000008986	YTHDC1	51	63.880	Ochotona_princeps
ENSPREG00000016973	ythdc1	59	59.698	ENSODEG00000001715	YTHDC1	66	71.429	Octodon_degus
ENSPREG00000016973	ythdc1	93	93.182	ENSONIG00000012651	ythdc1	94	68.429	Oreochromis_niloticus
ENSPREG00000016973	ythdc1	54	62.402	ENSOANG00000014398	YTHDC1	51	61.853	Ornithorhynchus_anatinus
ENSPREG00000016973	ythdc1	86	64.444	ENSOCUG00000015886	YTHDC1	71	66.189	Oryctolagus_cuniculus
ENSPREG00000016973	ythdc1	90	76.407	ENSORLG00000030544	ythdc1	83	73.321	Oryzias_latipes
ENSPREG00000016973	ythdc1	90	77.174	ENSORLG00020019316	ythdc1	83	73.140	Oryzias_latipes_hni
ENSPREG00000016973	ythdc1	90	75.763	ENSOMEG00000000551	ythdc1	95	67.722	Oryzias_melastigma
ENSPREG00000016973	ythdc1	59	58.894	ENSOGAG00000003362	YTHDC1	65	71.429	Otolemur_garnettii
ENSPREG00000016973	ythdc1	59	57.933	ENSOARG00000008633	YTHDC1	65	71.429	Ovis_aries
ENSPREG00000016973	ythdc1	76	51.521	ENSPPAG00000041315	YTHDC1	68	63.370	Pan_paniscus
ENSPREG00000016973	ythdc1	59	60.302	ENSPPRG00000011979	YTHDC1	78	58.824	Panthera_pardus
ENSPREG00000016973	ythdc1	59	59.799	ENSPTIG00000015527	YTHDC1	77	58.353	Panthera_tigris_altaica
ENSPREG00000016973	ythdc1	76	51.521	ENSPTRG00000016105	YTHDC1	68	63.370	Pan_troglodytes
ENSPREG00000016973	ythdc1	77	51.229	ENSPANG00000021590	YTHDC1	67	63.370	Papio_anubis
ENSPREG00000016973	ythdc1	99	53.901	ENSPKIG00000018497	ythdc1	77	61.151	Paramormyrops_kingsleyae
ENSPREG00000016973	ythdc1	91	51.455	ENSPSIG00000002782	YTHDC1	60	60.337	Pelodiscus_sinensis
ENSPREG00000016973	ythdc1	65	70.783	ENSPMGG00000000970	-	81	69.298	Periophthalmus_magnuspinnatus
ENSPREG00000016973	ythdc1	59	59.799	ENSPEMG00000013850	Ythdc1	70	58.894	Peromyscus_maniculatus_bairdii
ENSPREG00000016973	ythdc1	93	52.352	ENSPCIG00000006870	YTHDC1	59	60.192	Phascolarctos_cinereus
ENSPREG00000016973	ythdc1	100	87.519	ENSPFOG00000013404	ythdc1	100	87.519	Poecilia_formosa
ENSPREG00000016973	ythdc1	68	85.106	ENSPLAG00000011079	ythdc1	99	85.106	Poecilia_latipinna
ENSPREG00000016973	ythdc1	100	87.519	ENSPMEG00000009238	ythdc1	100	87.519	Poecilia_mexicana
ENSPREG00000016973	ythdc1	59	58.413	ENSPPYG00000014726	YTHDC1	65	59.712	Pongo_abelii
ENSPREG00000016973	ythdc1	93	48.457	ENSPCOG00000019105	YTHDC1	55	56.171	Propithecus_coquereli
ENSPREG00000016973	ythdc1	59	55.288	ENSPVAG00000015551	YTHDC1	70	56.595	Pteropus_vampyrus
ENSPREG00000016973	ythdc1	90	81.362	ENSPNYG00000011687	ythdc1	94	67.963	Pundamilia_nyererei
ENSPREG00000016973	ythdc1	93	59.190	ENSPNAG00000028365	ythdc1	57	67.595	Pygocentrus_nattereri
ENSPREG00000016973	ythdc1	59	57.075	ENSRNOG00000001996	Ythdc1	78	58.353	Rattus_norvegicus
ENSPREG00000016973	ythdc1	76	51.145	ENSRBIG00000028279	YTHDC1	70	58.865	Rhinopithecus_bieti
ENSPREG00000016973	ythdc1	76	51.331	ENSRROG00000035028	YTHDC1	67	63.370	Rhinopithecus_roxellana
ENSPREG00000016973	ythdc1	76	51.331	ENSSBOG00000022353	YTHDC1	67	63.370	Saimiri_boliviensis_boliviensis
ENSPREG00000016973	ythdc1	93	51.442	ENSSHAG00000002538	YTHDC1	65	60.432	Sarcophilus_harrisii
ENSPREG00000016973	ythdc1	93	56.577	ENSSFOG00015003298	ythdc1	58	66.919	Scleropages_formosus
ENSPREG00000016973	ythdc1	90	79.317	ENSSMAG00000009086	ythdc1	82	77.698	Scophthalmus_maximus
ENSPREG00000016973	ythdc1	90	81.172	ENSSDUG00000022008	ythdc1	94	69.907	Seriola_dumerili
ENSPREG00000016973	ythdc1	90	79.152	ENSSLDG00000007926	ythdc1	82	79.218	Seriola_lalandi_dorsalis
ENSPREG00000016973	ythdc1	59	58.173	ENSSARG00000010960	YTHDC1	72	59.472	Sorex_araneus
ENSPREG00000016973	ythdc1	93	50.926	ENSSPUG00000009357	YTHDC1	61	59.809	Sphenodon_punctatus
ENSPREG00000016973	ythdc1	90	83.304	ENSSPAG00000011449	ythdc1	82	82.060	Stegastes_partitus
ENSPREG00000016973	ythdc1	59	59.360	ENSSSCG00000035505	YTHDC1	65	71.429	Sus_scrofa
ENSPREG00000016973	ythdc1	93	51.652	ENSTGUG00000004452	-	59	60.337	Taeniopygia_guttata
ENSPREG00000016973	ythdc1	94	61.301	ENSTRUG00000010142	ythdc1	70	77.500	Takifugu_rubripes
ENSPREG00000016973	ythdc1	96	70.579	ENSTNIG00000013243	ythdc1	87	74.877	Tetraodon_nigroviridis
ENSPREG00000016973	ythdc1	93	48.328	ENSTBEG00000011546	YTHDC1	50	62.953	Tupaia_belangeri
ENSPREG00000016973	ythdc1	59	57.692	ENSTTRG00000005083	YTHDC1	65	71.429	Tursiops_truncatus
ENSPREG00000016973	ythdc1	59	60.302	ENSUAMG00000010388	YTHDC1	61	59.952	Ursus_americanus
ENSPREG00000016973	ythdc1	91	46.948	ENSUMAG00000013668	YTHDC1	61	51.064	Ursus_maritimus
ENSPREG00000016973	ythdc1	93	50.530	ENSVPAG00000009040	YTHDC1	56	60.302	Vicugna_pacos
ENSPREG00000016973	ythdc1	59	58.654	ENSVVUG00000005387	YTHDC1	76	58.824	Vulpes_vulpes
ENSPREG00000016973	ythdc1	93	54.016	ENSXETG00000017960	ythdc1	57	66.237	Xenopus_tropicalis
ENSPREG00000016973	ythdc1	57	91.837	ENSXCOG00000000530	ythdc1	85	91.919	Xiphophorus_couchianus
ENSPREG00000016973	ythdc1	90	93.738	ENSXMAG00000005196	ythdc1	82	93.370	Xiphophorus_maculatus