EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000017068 (Gene tree)
Gene ID: 103462978
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 17385 bases
Position: chrLG3:32579340-32596724
Accession: 103462978
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000025273	zf-C2H2	PF00096.26	3.2e-36	1	8
ENSPREP00000025273	zf-C2H2	PF00096.26	3.2e-36	2	8
ENSPREP00000025273	zf-C2H2	PF00096.26	3.2e-36	3	8
ENSPREP00000025273	zf-C2H2	PF00096.26	3.2e-36	4	8
ENSPREP00000025273	zf-C2H2	PF00096.26	3.2e-36	5	8
ENSPREP00000025273	zf-C2H2	PF00096.26	3.2e-36	6	8
ENSPREP00000025273	zf-C2H2	PF00096.26	3.2e-36	7	8
ENSPREP00000025273	zf-C2H2	PF00096.26	3.2e-36	8	8
ENSPREP00000025273	zf-met	PF12874.7	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000025524	-	3041	XM_008406057	ENSPREP00000025273	709 (aa)	XP_008404279	UPI0004A3F234

Gene Model

Click here to download ENSPREG00000017068's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000017068's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000017068	-	52	38.596	ENSPREG00000002642	-	91	38.596
ENSPREG00000017068	-	50	42.268	ENSPREG00000004839	-	91	42.268
ENSPREG00000017068	-	51	43.860	ENSPREG00000019990	-	97	43.860
ENSPREG00000017068	-	51	41.954	ENSPREG00000011439	-	99	44.767
ENSPREG00000017068	-	58	39.683	ENSPREG00000004036	-	90	40.893
ENSPREG00000017068	-	51	39.801	ENSPREG00000014366	-	96	39.801
ENSPREG00000017068	-	50	38.110	ENSPREG00000013154	-	88	38.519
ENSPREG00000017068	-	62	38.362	ENSPREG00000013699	-	65	41.584
ENSPREG00000017068	-	53	40.441	ENSPREG00000009372	-	93	40.441
ENSPREG00000017068	-	59	37.063	ENSPREG00000012539	-	64	39.565
ENSPREG00000017068	-	50	43.515	ENSPREG00000011741	-	97	41.353
ENSPREG00000017068	-	60	41.803	ENSPREG00000013476	-	96	44.056
ENSPREG00000017068	-	50	40.467	ENSPREG00000001441	-	95	42.786
ENSPREG00000017068	-	56	31.061	ENSPREG00000009745	PRDM15	55	31.061
ENSPREG00000017068	-	60	48.485	ENSPREG00000007431	-	89	48.485
ENSPREG00000017068	-	51	36.596	ENSPREG00000010261	zbtb17	69	35.249
ENSPREG00000017068	-	56	43.130	ENSPREG00000015017	-	92	43.130
ENSPREG00000017068	-	50	41.135	ENSPREG00000013780	-	95	41.135
ENSPREG00000017068	-	51	42.574	ENSPREG00000003614	-	99	44.279
ENSPREG00000017068	-	59	41.880	ENSPREG00000015286	-	94	43.478
ENSPREG00000017068	-	50	43.820	ENSPREG00000013112	-	88	43.820
ENSPREG00000017068	-	50	45.122	ENSPREG00000014028	-	96	45.122

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000017068	-	98	36.951	ENSG00000175213	ZNF408	92	36.849	Homo_sapiens
ENSPREG00000017068	-	59	46.778	ENSAMEG00000006904	ZNF408	93	35.733	Ailuropoda_melanoleuca
ENSPREG00000017068	-	99	36.277	ENSANAG00000036294	ZNF408	56	47.317	Aotus_nancymaae
ENSPREG00000017068	-	98	37.313	ENSAMXG00000032642	znf408	98	37.378	Astyanax_mexicanus
ENSPREG00000017068	-	99	35.618	ENSCJAG00000019859	ZNF408	93	36.290	Callithrix_jacchus
ENSPREG00000017068	-	60	45.585	ENSCHIG00000025346	ZNF408	61	45.585	Capra_hircus
ENSPREG00000017068	-	82	38.769	ENSTSYG00000025443	ZNF408	93	35.359	Carlito_syrichta
ENSPREG00000017068	-	99	36.635	ENSCCAG00000029472	ZNF408	94	37.143	Cebus_capucinus
ENSPREG00000017068	-	80	38.079	ENSCGRG00001023588	Zfp408	80	38.079	Cricetulus_griseus_chok1gshd
ENSPREG00000017068	-	80	38.079	ENSCGRG00000017618	Zfp408	80	38.079	Cricetulus_griseus_crigri
ENSPREG00000017068	-	82	39.840	ENSDNOG00000047669	ZNF408	82	39.580	Dasypus_novemcinctus
ENSPREG00000017068	-	82	38.889	ENSDORG00000000387	Zfp408	90	35.901	Dipodomys_ordii
ENSPREG00000017068	-	58	46.098	ENSEASG00005015461	ZNF408	53	46.210	Equus_asinus_asinus
ENSPREG00000017068	-	58	46.341	ENSECAG00000010878	ZNF408	54	46.341	Equus_caballus
ENSPREG00000017068	-	82	38.424	ENSFCAG00000029105	ZNF408	93	35.255	Felis_catus
ENSPREG00000017068	-	100	66.667	ENSFHEG00000016754	-	100	66.794	Fundulus_heteroclitus
ENSPREG00000017068	-	100	91.268	ENSGAFG00000018557	-	100	91.268	Gambusia_affinis
ENSPREG00000017068	-	98	36.501	ENSGGOG00000010152	ZNF408	92	36.936	Gorilla_gorilla
ENSPREG00000017068	-	82	38.772	ENSMICG00000045320	ZNF408	93	35.532	Microcebus_murinus
ENSPREG00000017068	-	59	46.778	ENSMPUG00000005490	ZNF408	94	35.609	Mustela_putorius_furo
ENSPREG00000017068	-	82	38.710	ENSNGAG00000000309	Zfp408	83	38.684	Nannospalax_galili
ENSPREG00000017068	-	99	36.265	ENSNLEG00000014132	ZNF408	93	36.572	Nomascus_leucogenys
ENSPREG00000017068	-	84	39.314	ENSOCUG00000010953	ZNF408	83	39.331	Oryctolagus_cuniculus
ENSPREG00000017068	-	70	43.373	ENSOGAG00000034080	ZNF408	73	43.373	Otolemur_garnettii
ENSPREG00000017068	-	98	36.813	ENSPPAG00000034993	ZNF408	92	37.123	Pan_paniscus
ENSPREG00000017068	-	82	37.380	ENSPTIG00000015467	ZNF408	94	34.973	Panthera_tigris_altaica
ENSPREG00000017068	-	98	36.690	ENSPTRG00000003551	ZNF408	92	37.123	Pan_troglodytes
ENSPREG00000017068	-	100	94.648	ENSPFOG00000001760	-	100	94.648	Poecilia_formosa
ENSPREG00000017068	-	81	95.032	ENSPLAG00000019895	-	100	95.032	Poecilia_latipinna
ENSPREG00000017068	-	78	87.138	ENSPMEG00000021147	-	98	87.138	Poecilia_mexicana
ENSPREG00000017068	-	99	36.314	ENSPPYG00000003318	ZNF408	93	36.626	Pongo_abelii
ENSPREG00000017068	-	82	39.542	ENSPCAG00000014001	ZNF408	94	36.585	Procavia_capensis
ENSPREG00000017068	-	82	38.599	ENSPCOG00000028698	ZNF408	83	38.669	Propithecus_coquereli
ENSPREG00000017068	-	98	34.716	ENSPVAG00000015791	ZNF408	92	34.716	Pteropus_vampyrus
ENSPREG00000017068	-	99	35.935	ENSSBOG00000033023	ZNF408	93	36.549	Saimiri_boliviensis_boliviensis
ENSPREG00000017068	-	99	35.121	ENSSSCG00000023097	ZNF408	91	35.121	Sus_scrofa
ENSPREG00000017068	-	59	46.301	ENSUAMG00000026154	ZNF408	93	35.629	Ursus_americanus
ENSPREG00000017068	-	59	46.301	ENSUMAG00000014405	ZNF408	93	35.676	Ursus_maritimus
ENSPREG00000017068	-	99	34.800	ENSVVUG00000026805	ZNF408	50	46.341	Vulpes_vulpes
ENSPREG00000017068	-	80	90.789	ENSXCOG00000002869	-	100	90.789	Xiphophorus_couchianus
ENSPREG00000017068	-	79	90.667	ENSXMAG00000018347	-	100	90.667	Xiphophorus_maculatus