EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000017248 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 5112 bases
Position: chrLG11:5242042-5247153
Accession: 103472052
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000025535	BUD22	PF09073.10	1.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000025790	-	1212	XM_008421411	ENSPREP00000025535	403 (aa)	XP_008419633	-

Gene Model

Click here to download ENSPREG00000017248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000017248's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000017248	-	98	41.514	ENSG00000151304	SRFBP1	98	40.783	Homo_sapiens
ENSPREG00000017248	-	99	51.055	ENSAPOG00000021469	-	84	53.191	Acanthochromis_polyacanthus
ENSPREG00000017248	-	99	53.846	ENSACIG00000019127	-	99	54.060	Amphilophus_citrinellus
ENSPREG00000017248	-	99	51.899	ENSAOCG00000002182	-	83	53.191	Amphiprion_ocellaris
ENSPREG00000017248	-	99	52.665	ENSAPEG00000003041	-	84	53.548	Amphiprion_percula
ENSPREG00000017248	-	99	52.381	ENSATEG00000007289	-	84	52.588	Anabas_testudineus
ENSPREG00000017248	-	98	39.041	ENSACAG00000003779	SRFBP1	99	38.991	Anolis_carolinensis
ENSPREG00000017248	-	98	40.749	ENSANAG00000022485	SRFBP1	98	39.529	Aotus_nancymaae
ENSPREG00000017248	-	99	53.402	ENSACLG00000013909	-	88	53.125	Astatotilapia_calliptera
ENSPREG00000017248	-	76	56.557	ENSAMXG00000040976	srfbp1	67	56.557	Astyanax_mexicanus
ENSPREG00000017248	-	98	41.591	ENSBTAG00000014320	SRFBP1	99	41.553	Bos_taurus
ENSPREG00000017248	-	98	40.227	ENSCJAG00000017177	SRFBP1	98	38.991	Callithrix_jacchus
ENSPREG00000017248	-	98	42.760	ENSCAFG00000000512	SRFBP1	98	42.081	Canis_familiaris
ENSPREG00000017248	-	98	42.760	ENSCAFG00020009389	SRFBP1	98	42.081	Canis_lupus_dingo
ENSPREG00000017248	-	96	30.958	ENSTSYG00000006869	-	99	30.370	Carlito_syrichta
ENSPREG00000017248	-	97	40.984	ENSTSYG00000008630	-	98	40.706	Carlito_syrichta
ENSPREG00000017248	-	98	40.093	ENSCPOG00000004695	SRFBP1	98	39.437	Cavia_porcellus
ENSPREG00000017248	-	98	41.355	ENSCCAG00000032237	-	98	40.610	Cebus_capucinus
ENSPREG00000017248	-	98	41.355	ENSCATG00000040904	SRFBP1	98	41.080	Cercocebus_atys
ENSPREG00000017248	-	98	39.100	ENSCLAG00000003630	SRFBP1	98	40.143	Chinchilla_lanigera
ENSPREG00000017248	-	98	40.421	ENSCSAG00000014636	SRFBP1	98	40.845	Chlorocebus_sabaeus
ENSPREG00000017248	-	98	41.121	ENSCANG00000041298	SRFBP1	98	40.845	Colobus_angolensis_palliatus
ENSPREG00000017248	-	98	40.682	ENSCGRG00001000718	Srfbp1	96	41.096	Cricetulus_griseus_chok1gshd
ENSPREG00000017248	-	96	39.302	ENSCGRG00000010837	Srfbp1	99	39.720	Cricetulus_griseus_crigri
ENSPREG00000017248	-	98	52.868	ENSCSEG00000011789	-	98	55.742	Cynoglossus_semilaevis
ENSPREG00000017248	-	99	61.871	ENSCVAG00000013010	-	98	62.470	Cyprinodon_variegatus
ENSPREG00000017248	-	74	58.915	ENSDARG00000075323	srfbp1	65	58.915	Danio_rerio
ENSPREG00000017248	-	77	35.465	ENSDNOG00000017733	SRFBP1	99	34.795	Dasypus_novemcinctus
ENSPREG00000017248	-	77	34.302	ENSETEG00000012408	SRFBP1	99	34.294	Echinops_telfairi
ENSPREG00000017248	-	75	40.496	ENSEBUG00000007806	SRFBP1	59	40.496	Eptatretus_burgeri
ENSPREG00000017248	-	98	41.686	ENSEASG00005012421	SRFBP1	98	40.961	Equus_asinus_asinus
ENSPREG00000017248	-	98	41.913	ENSECAG00000015330	SRFBP1	98	41.190	Equus_caballus
ENSPREG00000017248	-	98	36.407	ENSEEUG00000011514	SRFBP1	98	35.629	Erinaceus_europaeus
ENSPREG00000017248	-	99	42.888	ENSELUG00000018381	-	97	43.111	Esox_lucius
ENSPREG00000017248	-	98	41.435	ENSFCAG00000035118	SRFBP1	98	40.416	Felis_catus
ENSPREG00000017248	-	96	34.240	ENSFALG00000007595	SRFBP1	99	33.941	Ficedula_albicollis
ENSPREG00000017248	-	99	39.401	ENSFDAG00000005102	SRFBP1	99	39.261	Fukomys_damarensis
ENSPREG00000017248	-	99	62.190	ENSFHEG00000000477	-	86	60.331	Fundulus_heteroclitus
ENSPREG00000017248	-	97	42.822	ENSGMOG00000012729	-	84	42.157	Gadus_morhua
ENSPREG00000017248	-	98	38.322	ENSGALG00000005316	SRFBP1	99	37.471	Gallus_gallus
ENSPREG00000017248	-	99	72.443	ENSGAFG00000018777	-	87	70.711	Gambusia_affinis
ENSPREG00000017248	-	98	48.951	ENSGACG00000009055	-	83	50.351	Gasterosteus_aculeatus
ENSPREG00000017248	-	96	40.326	ENSGAGG00000024915	SRFBP1	99	39.720	Gopherus_agassizii
ENSPREG00000017248	-	98	42.056	ENSGGOG00000007725	SRFBP1	98	41.315	Gorilla_gorilla
ENSPREG00000017248	-	77	67.200	ENSIPUG00000014640	srfbp1	92	60.127	Ictalurus_punctatus
ENSPREG00000017248	-	99	39.551	ENSSTOG00000029184	SRFBP1	97	39.278	Ictidomys_tridecemlineatus
ENSPREG00000017248	-	96	39.671	ENSJJAG00000013229	Srfbp1	99	39.759	Jaculus_jaculus
ENSPREG00000017248	-	98	45.378	ENSLBEG00000013924	-	95	45.203	Labrus_bergylta
ENSPREG00000017248	-	77	34.078	ENSLACG00000004456	SRFBP1	99	34.831	Latimeria_chalumnae
ENSPREG00000017248	-	99	42.670	ENSLOCG00000008772	SRFBP1	99	42.605	Lepisosteus_oculatus
ENSPREG00000017248	-	98	40.647	ENSLAFG00000015303	SRFBP1	96	41.067	Loxodonta_africana
ENSPREG00000017248	-	98	41.355	ENSMFAG00000031263	SRFBP1	98	41.315	Macaca_fascicularis
ENSPREG00000017248	-	98	41.589	ENSMMUG00000021009	SRFBP1	98	41.315	Macaca_mulatta
ENSPREG00000017248	-	98	41.121	ENSMNEG00000040870	SRFBP1	98	40.845	Macaca_nemestrina
ENSPREG00000017248	-	98	46.926	ENSMAMG00000004632	-	65	50.938	Mastacembelus_armatus
ENSPREG00000017248	-	99	53.975	ENSMZEG00005000432	-	88	53.700	Maylandia_zebra
ENSPREG00000017248	-	98	41.026	ENSMICG00000042923	SRFBP1	98	40.281	Microcebus_murinus
ENSPREG00000017248	-	98	40.455	ENSMOCG00000006206	Srfbp1	96	40.639	Microtus_ochrogaster
ENSPREG00000017248	-	98	46.957	ENSMMOG00000021202	-	96	49.781	Mola_mola
ENSPREG00000017248	-	99	40.000	ENSMODG00000013487	-	98	41.014	Monodelphis_domestica
ENSPREG00000017248	-	99	49.109	ENSMALG00000001812	-	88	49.901	Monopterus_albus
ENSPREG00000017248	-	98	41.230	MGP_CAROLIEiJ_G0022271	Srfbp1	96	42.166	Mus_caroli
ENSPREG00000017248	-	98	41.244	ENSMUSG00000024528	Srfbp1	96	41.570	Mus_musculus
ENSPREG00000017248	-	98	42.922	MGP_PahariEiJ_G0019004	Srfbp1	96	42.627	Mus_pahari
ENSPREG00000017248	-	98	42.081	MGP_SPRETEiJ_G0023184	Srfbp1	96	42.404	Mus_spretus
ENSPREG00000017248	-	96	40.749	ENSMPUG00000013031	SRFBP1	99	40.952	Mustela_putorius_furo
ENSPREG00000017248	-	99	40.774	ENSMLUG00000009984	SRFBP1	99	40.046	Myotis_lucifugus
ENSPREG00000017248	-	97	40.972	ENSNGAG00000013229	Srfbp1	97	40.698	Nannospalax_galili
ENSPREG00000017248	-	99	53.636	ENSNBRG00000001146	-	98	53.636	Neolamprologus_brichardi
ENSPREG00000017248	-	98	41.553	ENSNLEG00000011949	SRFBP1	98	41.284	Nomascus_leucogenys
ENSPREG00000017248	-	56	50.000	ENSOPRG00000003881	-	64	50.000	Ochotona_princeps
ENSPREG00000017248	-	96	38.038	ENSODEG00000007258	SRFBP1	99	38.298	Octodon_degus
ENSPREG00000017248	-	85	37.209	ENSOANG00000010042	-	98	36.364	Ornithorhynchus_anatinus
ENSPREG00000017248	-	98	42.494	ENSOCUG00000009556	SRFBP1	99	40.690	Oryctolagus_cuniculus
ENSPREG00000017248	-	99	47.216	ENSORLG00000014234	-	87	46.502	Oryzias_latipes
ENSPREG00000017248	-	85	72.800	ENSORLG00020020129	-	87	44.055	Oryzias_latipes_hni
ENSPREG00000017248	-	98	50.966	ENSORLG00015000238	-	97	50.605	Oryzias_latipes_hsok
ENSPREG00000017248	-	98	39.318	ENSOGAG00000032423	SRFBP1	99	39.954	Otolemur_garnettii
ENSPREG00000017248	-	98	41.355	ENSPPAG00000035848	SRFBP1	98	40.610	Pan_paniscus
ENSPREG00000017248	-	98	41.379	ENSPPRG00000001695	SRFBP1	98	40.647	Panthera_pardus
ENSPREG00000017248	-	98	41.763	ENSPTIG00000012305	SRFBP1	98	41.026	Panthera_tigris_altaica
ENSPREG00000017248	-	98	41.284	ENSPTRG00000017172	SRFBP1	98	40.553	Pan_troglodytes
ENSPREG00000017248	-	98	41.686	ENSPANG00000003799	SRFBP1	98	41.176	Papio_anubis
ENSPREG00000017248	-	98	40.239	ENSPKIG00000024291	-	99	40.000	Paramormyrops_kingsleyae
ENSPREG00000017248	-	99	54.436	ENSPMGG00000001675	-	98	54.217	Periophthalmus_magnuspinnatus
ENSPREG00000017248	-	99	40.000	ENSPCIG00000028532	SRFBP1	93	40.583	Phascolarctos_cinereus
ENSPREG00000017248	-	99	77.449	ENSPFOG00000005272	-	87	78.211	Poecilia_formosa
ENSPREG00000017248	-	99	75.738	ENSPLAG00000018282	-	88	77.004	Poecilia_latipinna
ENSPREG00000017248	-	99	75.949	ENSPMEG00000020184	-	88	77.004	Poecilia_mexicana
ENSPREG00000017248	-	98	41.355	ENSPPYG00000015714	SRFBP1	98	40.845	Pongo_abelii
ENSPREG00000017248	-	99	40.940	ENSPCOG00000027331	SRFBP1	99	41.002	Propithecus_coquereli
ENSPREG00000017248	-	99	53.935	ENSPNYG00000010355	-	99	53.580	Pundamilia_nyererei
ENSPREG00000017248	-	75	59.124	ENSPNAG00000029666	srfbp1	69	60.150	Pygocentrus_nattereri
ENSPREG00000017248	-	98	40.961	ENSRNOG00000014808	Srfbp1	96	40.920	Rattus_norvegicus
ENSPREG00000017248	-	96	38.902	ENSRBIG00000031064	SRFBP1	99	38.849	Rhinopithecus_bieti
ENSPREG00000017248	-	98	41.026	ENSRROG00000026932	SRFBP1	98	41.218	Rhinopithecus_roxellana
ENSPREG00000017248	-	98	41.014	ENSSBOG00000015464	-	98	40.371	Saimiri_boliviensis_boliviensis
ENSPREG00000017248	-	98	37.875	ENSSHAG00000016003	SRFBP1	98	40.698	Sarcophilus_harrisii
ENSPREG00000017248	-	99	42.469	ENSSFOG00015001274	srfbp1	99	42.316	Scleropages_formosus
ENSPREG00000017248	-	81	51.613	ENSSMAG00000020630	-	84	47.677	Scophthalmus_maximus
ENSPREG00000017248	-	99	50.607	ENSSDUG00000001828	-	85	51.224	Seriola_dumerili
ENSPREG00000017248	-	98	42.032	ENSSARG00000010669	SRFBP1	98	42.227	Sorex_araneus
ENSPREG00000017248	-	96	38.426	ENSSPUG00000009204	SRFBP1	99	39.671	Sphenodon_punctatus
ENSPREG00000017248	-	99	49.023	ENSSPAG00000010728	-	84	50.195	Stegastes_partitus
ENSPREG00000017248	-	98	41.958	ENSSSCG00000022656	SRFBP1	98	42.056	Sus_scrofa
ENSPREG00000017248	-	99	50.465	ENSTNIG00000009267	-	98	52.804	Tetraodon_nigroviridis
ENSPREG00000017248	-	50	59.130	ENSTTRG00000007726	SRFBP1	51	59.130	Tursiops_truncatus
ENSPREG00000017248	-	96	40.952	ENSUAMG00000016707	SRFBP1	99	40.191	Ursus_americanus
ENSPREG00000017248	-	97	40.047	ENSUMAG00000018340	SRFBP1	99	39.762	Ursus_maritimus
ENSPREG00000017248	-	98	42.141	ENSVPAG00000005714	SRFBP1	98	42.009	Vicugna_pacos
ENSPREG00000017248	-	98	42.760	ENSVVUG00000019178	SRFBP1	98	42.045	Vulpes_vulpes
ENSPREG00000017248	-	97	39.815	ENSXETG00000004681	srfbp1	99	37.581	Xenopus_tropicalis
ENSPREG00000017248	-	99	72.421	ENSXCOG00000003410	-	99	70.947	Xiphophorus_couchianus
ENSPREG00000017248	-	99	73.629	ENSXMAG00000026251	-	86	75.105	Xiphophorus_maculatus