EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000017370 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 4-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 24496 bases
Position: chrLG7:22835117-22859612
Accession: 103467510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000025745	KH_1	PF00013.29	3.5e-40	1	2
ENSPREP00000025745	KH_1	PF00013.29	3.5e-40	2	2
ENSPREP00000025745	KH_2	PF07650.17	5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000026001	-	1263	XM_008413951	ENSPREP00000025745	420 (aa)	XP_008412173	-

Gene Model

Click here to download ENSPREG00000017370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000017370's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000017370	-	98	50.673	ENSPREG00000001797	zgc:110045	98	50.224
ENSPREG00000017370	-	57	33.333	ENSPREG00000011614	nova1	75	30.709
ENSPREG00000017370	-	71	54.658	ENSPREG00000015736	pcbp3	97	54.658
ENSPREG00000017370	-	71	55.172	ENSPREG00000020585	-	94	55.172
ENSPREG00000017370	-	66	43.056	ENSPREG00000017911	fubp1	55	43.056
ENSPREG00000017370	-	74	60.595	ENSPREG00000021498	-	75	60.595
ENSPREG00000017370	-	74	51.156	ENSPREG00000007742	PCBP2	98	51.304
ENSPREG00000017370	-	74	52.121	ENSPREG00000006202	pcbp2	98	52.280

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000017370	-	98	50.783	ENSG00000090097	PCBP4	97	61.350	Homo_sapiens
ENSPREG00000017370	-	100	86.323	ENSAPOG00000009897	-	98	86.323	Acanthochromis_polyacanthus
ENSPREG00000017370	-	97	52.204	ENSAMEG00000009211	PCBP4	97	52.436	Ailuropoda_melanoleuca
ENSPREG00000017370	-	94	69.905	ENSACIG00000015264	pcbp4	89	70.922	Amphilophus_citrinellus
ENSPREG00000017370	-	95	89.901	ENSACIG00000020434	-	98	89.901	Amphilophus_citrinellus
ENSPREG00000017370	-	90	64.583	ENSAOCG00000006924	-	100	64.323	Amphiprion_ocellaris
ENSPREG00000017370	-	100	89.720	ENSAOCG00000021366	-	100	89.720	Amphiprion_ocellaris
ENSPREG00000017370	-	95	71.875	ENSAPEG00000023157	pcbp4	99	71.875	Amphiprion_percula
ENSPREG00000017370	-	95	67.813	ENSAPEG00000009555	-	74	94.944	Amphiprion_percula
ENSPREG00000017370	-	94	67.246	ENSATEG00000008529	pcbp4	93	67.164	Anabas_testudineus
ENSPREG00000017370	-	100	86.986	ENSATEG00000006511	-	100	86.986	Anabas_testudineus
ENSPREG00000017370	-	97	57.442	ENSACAG00000011701	PCBP4	97	57.209	Anolis_carolinensis
ENSPREG00000017370	-	98	51.835	ENSANAG00000023072	PCBP4	99	52.064	Aotus_nancymaae
ENSPREG00000017370	-	100	65.145	ENSACLG00000013348	pcbp4	96	64.730	Astatotilapia_calliptera
ENSPREG00000017370	-	100	89.044	ENSACLG00000025246	-	100	89.044	Astatotilapia_calliptera
ENSPREG00000017370	-	100	74.066	ENSAMXG00000033125	pcbp4	98	74.066	Astyanax_mexicanus
ENSPREG00000017370	-	97	52.204	ENSBTAG00000018622	PCBP4	97	52.436	Bos_taurus
ENSPREG00000017370	-	98	50.783	ENSCJAG00000005783	PCBP4	99	51.230	Callithrix_jacchus
ENSPREG00000017370	-	97	52.204	ENSCAFG00000010019	PCBP4	97	52.436	Canis_familiaris
ENSPREG00000017370	-	97	52.204	ENSCAFG00020022361	PCBP4	97	52.436	Canis_lupus_dingo
ENSPREG00000017370	-	97	52.570	ENSCHIG00000012918	PCBP4	97	52.804	Capra_hircus
ENSPREG00000017370	-	97	52.436	ENSTSYG00000008765	PCBP4	97	52.668	Carlito_syrichta
ENSPREG00000017370	-	97	51.376	ENSCAPG00000005895	PCBP4	97	51.606	Cavia_aperea
ENSPREG00000017370	-	97	51.606	ENSCPOG00000014617	PCBP4	97	51.835	Cavia_porcellus
ENSPREG00000017370	-	98	51.474	ENSCCAG00000033268	PCBP4	99	51.701	Cebus_capucinus
ENSPREG00000017370	-	98	51.708	ENSCATG00000032034	PCBP4	99	51.461	Cercocebus_atys
ENSPREG00000017370	-	97	51.843	ENSCLAG00000008356	PCBP4	97	52.074	Chinchilla_lanigera
ENSPREG00000017370	-	98	50.783	ENSCSAG00000013913	PCBP4	99	51.230	Chlorocebus_sabaeus
ENSPREG00000017370	-	97	57.208	ENSCPBG00000016554	PCBP4	95	56.751	Chrysemys_picta_bellii
ENSPREG00000017370	-	98	51.708	ENSCANG00000038865	PCBP4	99	51.461	Colobus_angolensis_palliatus
ENSPREG00000017370	-	97	52.804	ENSCGRG00001014953	Pcbp4	97	53.037	Cricetulus_griseus_chok1gshd
ENSPREG00000017370	-	97	52.804	ENSCGRG00000008617	Pcbp4	97	53.037	Cricetulus_griseus_crigri
ENSPREG00000017370	-	100	62.762	ENSCSEG00000014487	pcbp4	95	63.808	Cynoglossus_semilaevis
ENSPREG00000017370	-	100	80.182	ENSCSEG00000021041	PCBP4	100	79.954	Cynoglossus_semilaevis
ENSPREG00000017370	-	100	89.726	ENSCVAG00000013090	-	100	89.227	Cyprinodon_variegatus
ENSPREG00000017370	-	95	68.421	ENSCVAG00000003674	pcbp4	96	68.182	Cyprinodon_variegatus
ENSPREG00000017370	-	100	73.568	ENSDARG00000024276	pcbp4	100	72.912	Danio_rerio
ENSPREG00000017370	-	94	47.222	ENSDNOG00000033951	PCBP4	87	47.222	Dasypus_novemcinctus
ENSPREG00000017370	-	97	50.917	ENSDORG00000000573	Pcbp4	97	51.606	Dipodomys_ordii
ENSPREG00000017370	-	67	56.436	ENSETEG00000001778	PCBP4	96	56.436	Echinops_telfairi
ENSPREG00000017370	-	97	51.972	ENSEASG00005012889	PCBP4	97	52.204	Equus_asinus_asinus
ENSPREG00000017370	-	97	51.972	ENSECAG00000024218	PCBP4	97	52.204	Equus_caballus
ENSPREG00000017370	-	100	67.591	ENSELUG00000018204	pcbp4	98	68.750	Esox_lucius
ENSPREG00000017370	-	100	78.319	ENSELUG00000001870	-	98	78.319	Esox_lucius
ENSPREG00000017370	-	97	52.204	ENSFCAG00000009148	PCBP4	97	52.436	Felis_catus
ENSPREG00000017370	-	95	53.428	ENSFALG00000008831	PCBP4	95	54.374	Ficedula_albicollis
ENSPREG00000017370	-	97	51.494	ENSFDAG00000012692	PCBP4	99	52.083	Fukomys_damarensis
ENSPREG00000017370	-	94	71.429	ENSFHEG00000002769	-	97	71.429	Fundulus_heteroclitus
ENSPREG00000017370	-	100	78.125	ENSGMOG00000017799	-	100	77.232	Gadus_morhua
ENSPREG00000017370	-	97	53.023	ENSGALG00000027695	PCBP4	97	53.596	Gallus_gallus
ENSPREG00000017370	-	60	88.000	ENSGAFG00000018301	pcbp4	63	88.000	Gambusia_affinis
ENSPREG00000017370	-	81	85.286	ENSGAFG00000021090	-	78	85.286	Gambusia_affinis
ENSPREG00000017370	-	100	80.580	ENSGACG00000002664	-	100	81.250	Gasterosteus_aculeatus
ENSPREG00000017370	-	97	57.437	ENSGAGG00000022116	PCBP4	95	57.437	Gopherus_agassizii
ENSPREG00000017370	-	98	50.559	ENSGGOG00000012474	PCBP4	99	51.007	Gorilla_gorilla
ENSPREG00000017370	-	100	88.811	ENSHBUG00000005329	-	100	88.811	Haplochromis_burtoni
ENSPREG00000017370	-	100	65.145	ENSHBUG00000009472	pcbp4	96	64.730	Haplochromis_burtoni
ENSPREG00000017370	-	97	51.716	ENSHGLG00000012018	PCBP4	97	52.064	Heterocephalus_glaber_female
ENSPREG00000017370	-	97	51.481	ENSHGLG00100008748	PCBP4	97	51.708	Heterocephalus_glaber_male
ENSPREG00000017370	-	100	78.700	ENSHCOG00000010838	-	99	82.456	Hippocampus_comes
ENSPREG00000017370	-	100	74.610	ENSIPUG00000008212	pcbp4	98	74.610	Ictalurus_punctatus
ENSPREG00000017370	-	97	52.804	ENSSTOG00000002573	PCBP4	97	53.037	Ictidomys_tridecemlineatus
ENSPREG00000017370	-	97	52.570	ENSJJAG00000016235	Pcbp4	97	53.037	Jaculus_jaculus
ENSPREG00000017370	-	100	67.308	ENSKMAG00000014252	pcbp4	97	66.414	Kryptolebias_marmoratus
ENSPREG00000017370	-	100	85.650	ENSKMAG00000017554	-	98	85.650	Kryptolebias_marmoratus
ENSPREG00000017370	-	100	86.468	ENSLBEG00000011345	-	100	86.468	Labrus_bergylta
ENSPREG00000017370	-	99	60.225	ENSLACG00000015899	PCBP4	94	70.886	Latimeria_chalumnae
ENSPREG00000017370	-	100	72.160	ENSLOCG00000013402	pcbp4	98	72.383	Lepisosteus_oculatus
ENSPREG00000017370	-	94	54.774	ENSLAFG00000010732	PCBP4	99	55.025	Loxodonta_africana
ENSPREG00000017370	-	98	51.708	ENSMFAG00000001431	PCBP4	99	51.461	Macaca_fascicularis
ENSPREG00000017370	-	98	51.708	ENSMMUG00000022205	PCBP4	99	51.461	Macaca_mulatta
ENSPREG00000017370	-	98	51.708	ENSMNEG00000028553	PCBP4	99	51.461	Macaca_nemestrina
ENSPREG00000017370	-	98	51.708	ENSMLEG00000027083	PCBP4	99	51.461	Mandrillus_leucophaeus
ENSPREG00000017370	-	100	66.525	ENSMAMG00000010163	pcbp4	95	67.377	Mastacembelus_armatus
ENSPREG00000017370	-	100	87.927	ENSMAMG00000011364	-	100	87.927	Mastacembelus_armatus
ENSPREG00000017370	-	100	89.252	ENSMZEG00005023631	-	100	89.252	Maylandia_zebra
ENSPREG00000017370	-	100	65.145	ENSMZEG00005008852	pcbp4	96	69.626	Maylandia_zebra
ENSPREG00000017370	-	63	57.754	ENSMGAG00000003895	-	86	57.754	Meleagris_gallopavo
ENSPREG00000017370	-	63	53.712	ENSMGAG00000005091	-	93	53.712	Meleagris_gallopavo
ENSPREG00000017370	-	97	51.716	ENSMAUG00000021064	Pcbp4	97	52.064	Mesocricetus_auratus
ENSPREG00000017370	-	97	51.606	ENSMICG00000002686	PCBP4	97	52.064	Microcebus_murinus
ENSPREG00000017370	-	97	52.074	ENSMOCG00000013557	Pcbp4	97	52.304	Microtus_ochrogaster
ENSPREG00000017370	-	100	85.034	ENSMMOG00000020533	-	100	85.034	Mola_mola
ENSPREG00000017370	-	70	64.068	ENSMMOG00000017756	pcbp4	92	64.189	Mola_mola
ENSPREG00000017370	-	97	52.874	ENSMODG00000011790	PCBP4	82	52.874	Monodelphis_domestica
ENSPREG00000017370	-	92	91.117	ENSMALG00000022117	-	100	90.836	Monopterus_albus
ENSPREG00000017370	-	91	69.082	ENSMALG00000020318	pcbp4	87	69.175	Monopterus_albus
ENSPREG00000017370	-	97	51.606	MGP_CAROLIEiJ_G0032623	Pcbp4	100	57.692	Mus_caroli
ENSPREG00000017370	-	97	51.606	ENSMUSG00000023495	Pcbp4	100	57.692	Mus_musculus
ENSPREG00000017370	-	97	51.606	MGP_PahariEiJ_G0015491	Pcbp4	100	57.692	Mus_pahari
ENSPREG00000017370	-	97	51.606	MGP_SPRETEiJ_G0033768	-	100	57.692	Mus_spretus
ENSPREG00000017370	-	97	52.204	ENSMPUG00000011766	PCBP4	97	52.436	Mustela_putorius_furo
ENSPREG00000017370	-	97	51.606	ENSNGAG00000013148	Pcbp4	99	52.561	Nannospalax_galili
ENSPREG00000017370	-	95	61.412	ENSNBRG00000007475	pcbp4	94	62.381	Neolamprologus_brichardi
ENSPREG00000017370	-	100	89.486	ENSNBRG00000015885	-	100	89.486	Neolamprologus_brichardi
ENSPREG00000017370	-	98	51.236	ENSNLEG00000007064	PCBP4	99	51.461	Nomascus_leucogenys
ENSPREG00000017370	-	95	48.989	ENSMEUG00000006917	PCBP4	97	48.989	Notamacropus_eugenii
ENSPREG00000017370	-	95	49.103	ENSOPRG00000008763	PCBP4	99	49.327	Ochotona_princeps
ENSPREG00000017370	-	97	51.606	ENSODEG00000018230	PCBP4	97	51.835	Octodon_degus
ENSPREG00000017370	-	97	53.147	ENSOANG00000014110	PCBP4	94	53.147	Ornithorhynchus_anatinus
ENSPREG00000017370	-	97	51.835	ENSOCUG00000025336	PCBP4	97	52.064	Oryctolagus_cuniculus
ENSPREG00000017370	-	100	86.230	ENSORLG00000009899	-	100	86.230	Oryzias_latipes
ENSPREG00000017370	-	100	64.331	ENSORLG00000003061	pcbp4	96	65.605	Oryzias_latipes
ENSPREG00000017370	-	100	85.426	ENSORLG00020001183	-	98	85.426	Oryzias_latipes_hni
ENSPREG00000017370	-	100	63.368	ENSORLG00015019262	pcbp4	96	64.421	Oryzias_latipes_hsok
ENSPREG00000017370	-	100	85.650	ENSORLG00015017819	-	98	85.650	Oryzias_latipes_hsok
ENSPREG00000017370	-	100	85.426	ENSOMEG00000011545	-	98	85.426	Oryzias_melastigma
ENSPREG00000017370	-	100	62.151	ENSOMEG00000003516	-	100	65.962	Oryzias_melastigma
ENSPREG00000017370	-	97	51.376	ENSOGAG00000032384	PCBP4	97	51.835	Otolemur_garnettii
ENSPREG00000017370	-	95	54.478	ENSOARG00000006603	PCBP4	99	54.726	Ovis_aries
ENSPREG00000017370	-	98	52.055	ENSPPAG00000038764	PCBP4	99	52.283	Pan_paniscus
ENSPREG00000017370	-	97	52.204	ENSPPRG00000006165	PCBP4	97	52.436	Panthera_pardus
ENSPREG00000017370	-	97	52.204	ENSPTIG00000005401	PCBP4	93	52.436	Panthera_tigris_altaica
ENSPREG00000017370	-	98	51.826	ENSPTRG00000014983	PCBP4	99	52.055	Pan_troglodytes
ENSPREG00000017370	-	98	51.708	ENSPANG00000026222	PCBP4	99	51.461	Papio_anubis
ENSPREG00000017370	-	100	75.278	ENSPKIG00000010244	pcbp4	100	75.581	Paramormyrops_kingsleyae
ENSPREG00000017370	-	100	68.456	ENSPKIG00000005487	-	98	68.009	Paramormyrops_kingsleyae
ENSPREG00000017370	-	80	55.182	ENSPSIG00000011286	PCBP4	96	55.182	Pelodiscus_sinensis
ENSPREG00000017370	-	100	79.863	ENSPMGG00000022732	-	100	80.320	Periophthalmus_magnuspinnatus
ENSPREG00000017370	-	95	70.936	ENSPMGG00000000063	pcbp4	97	70.690	Periophthalmus_magnuspinnatus
ENSPREG00000017370	-	97	51.954	ENSPEMG00000009276	Pcbp4	97	52.184	Peromyscus_maniculatus_bairdii
ENSPREG00000017370	-	97	53.563	ENSPCIG00000018151	PCBP4	93	53.563	Phascolarctos_cinereus
ENSPREG00000017370	-	97	62.277	ENSPFOG00000014474	pcbp4	96	76.587	Poecilia_formosa
ENSPREG00000017370	-	100	89.686	ENSPFOG00000002989	-	98	89.686	Poecilia_formosa
ENSPREG00000017370	-	85	65.274	ENSPLAG00000023316	pcbp4	89	66.580	Poecilia_latipinna
ENSPREG00000017370	-	80	96.648	ENSPLAG00000011438	-	98	96.648	Poecilia_latipinna
ENSPREG00000017370	-	64	56.711	ENSPMEG00000012990	pcbp4	100	58.389	Poecilia_mexicana
ENSPREG00000017370	-	98	50.783	ENSPPYG00000013822	PCBP4	99	51.230	Pongo_abelii
ENSPREG00000017370	-	95	50.457	ENSPCAG00000009515	PCBP4	99	50.685	Procavia_capensis
ENSPREG00000017370	-	97	51.606	ENSPCOG00000027535	PCBP4	97	52.064	Propithecus_coquereli
ENSPREG00000017370	-	95	47.912	ENSPVAG00000012474	PCBP4	99	47.473	Pteropus_vampyrus
ENSPREG00000017370	-	94	70.379	ENSPNYG00000019234	pcbp4	95	70.616	Pundamilia_nyererei
ENSPREG00000017370	-	100	89.019	ENSPNYG00000003098	-	100	89.019	Pundamilia_nyererei
ENSPREG00000017370	-	100	74.449	ENSPNAG00000025434	pcbp4	98	74.449	Pygocentrus_nattereri
ENSPREG00000017370	-	97	51.606	ENSRNOG00000012406	Pcbp4	97	52.064	Rattus_norvegicus
ENSPREG00000017370	-	98	51.708	ENSRBIG00000043793	PCBP4	99	51.461	Rhinopithecus_bieti
ENSPREG00000017370	-	98	51.708	ENSRROG00000034589	PCBP4	99	51.461	Rhinopithecus_roxellana
ENSPREG00000017370	-	98	51.474	ENSSBOG00000027029	PCBP4	99	51.701	Saimiri_boliviensis_boliviensis
ENSPREG00000017370	-	69	55.833	ENSSHAG00000007362	PCBP4	92	55.833	Sarcophilus_harrisii
ENSPREG00000017370	-	100	67.483	ENSSFOG00015012075	PCBP4	99	67.038	Scleropages_formosus
ENSPREG00000017370	-	71	77.199	ENSSFOG00015008221	pcbp4	60	77.199	Scleropages_formosus
ENSPREG00000017370	-	100	66.737	ENSSMAG00000005827	pcbp4	94	67.300	Scophthalmus_maximus
ENSPREG00000017370	-	100	87.442	ENSSMAG00000009392	-	100	87.442	Scophthalmus_maximus
ENSPREG00000017370	-	95	70.743	ENSSDUG00000017719	pcbp4	96	73.350	Seriola_dumerili
ENSPREG00000017370	-	100	90.632	ENSSDUG00000015540	-	100	90.632	Seriola_dumerili
ENSPREG00000017370	-	57	82.609	ENSSLDG00000024847	-	70	82.609	Seriola_lalandi_dorsalis
ENSPREG00000017370	-	100	90.632	ENSSLDG00000007851	-	100	90.632	Seriola_lalandi_dorsalis
ENSPREG00000017370	-	97	53.864	ENSSPUG00000000194	PCBP4	97	53.396	Sphenodon_punctatus
ENSPREG00000017370	-	100	87.588	ENSSPAG00000003033	-	100	87.588	Stegastes_partitus
ENSPREG00000017370	-	85	61.399	ENSSPAG00000019058	-	92	61.140	Stegastes_partitus
ENSPREG00000017370	-	97	52.204	ENSSSCG00000028446	PCBP4	97	52.436	Sus_scrofa
ENSPREG00000017370	-	70	51.420	ENSTGUG00000006393	PCBP4	96	51.420	Taeniopygia_guttata
ENSPREG00000017370	-	100	86.480	ENSTRUG00000007426	-	100	86.480	Takifugu_rubripes
ENSPREG00000017370	-	100	76.009	ENSTNIG00000017887	-	99	75.112	Tetraodon_nigroviridis
ENSPREG00000017370	-	85	37.250	ENSTBEG00000015770	PCBP4	100	37.500	Tupaia_belangeri
ENSPREG00000017370	-	76	52.632	ENSTTRG00000001443	PCBP4	84	53.158	Tursiops_truncatus
ENSPREG00000017370	-	98	47.806	ENSUAMG00000020871	PCBP4	100	53.678	Ursus_americanus
ENSPREG00000017370	-	88	53.283	ENSUMAG00000021609	PCBP4	90	53.266	Ursus_maritimus
ENSPREG00000017370	-	97	52.204	ENSVVUG00000026857	PCBP4	97	52.436	Vulpes_vulpes
ENSPREG00000017370	-	87	85.165	ENSXCOG00000000111	-	100	87.006	Xiphophorus_couchianus
ENSPREG00000017370	-	60	87.333	ENSXCOG00000017325	pcbp4	63	87.333	Xiphophorus_couchianus
ENSPREG00000017370	-	100	89.686	ENSXMAG00000024530	-	98	89.686	Xiphophorus_maculatus
ENSPREG00000017370	-	90	63.793	ENSXMAG00000022188	-	90	65.111	Xiphophorus_maculatus
ENSPREG00000017370	-	79	72.981	ENSXMAG00000015709	pcbp4	77	72.087	Xiphophorus_maculatus