EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000017487 (Gene tree)
Gene ID: 103479901
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 16185 bases
Position: chrLG17:26787119-26803303
Accession: 103479901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000025898	MMR_HSR1	PF01926.23	5.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000026156	-	735	XM_008434585	ENSPREP00000025898	244 (aa)	XP_008432807	UPI0004A35AEA

Gene Model

Click here to download ENSPREG00000017487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000017487's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000017487	rab12	66	33.537	ENSPREG00000022241	si:dkey-13a21.4	79	33.537
ENSPREG00000017487	rab12	83	40.097	ENSPREG00000017337	rab25b	80	42.604
ENSPREG00000017487	rab12	61	31.788	ENSPREG00000018287	KRAS	85	32.099
ENSPREG00000017487	rab12	64	31.210	ENSPREG00000016102	si:ch73-116o1.2	80	31.548
ENSPREG00000017487	rab12	67	35.119	ENSPREG00000001832	rab9a	83	35.119
ENSPREG00000017487	rab12	73	39.891	ENSPREG00000007017	zgc:101559	77	39.891
ENSPREG00000017487	rab12	77	37.696	ENSPREG00000009535	RAB41	73	41.026
ENSPREG00000017487	rab12	70	34.783	ENSPREG00000001864	-	74	35.465
ENSPREG00000017487	rab12	77	36.041	ENSPREG00000020276	RAB29	90	36.898
ENSPREG00000017487	rab12	82	39.801	ENSPREG00000006357	rab11ba	63	41.111
ENSPREG00000017487	rab12	70	51.163	ENSPREG00000017567	rab13	86	51.163
ENSPREG00000017487	rab12	68	32.335	ENSPREG00000010752	rheb	89	32.335
ENSPREG00000017487	rab12	83	38.967	ENSPREG00000009605	rab11a	95	38.967
ENSPREG00000017487	rab12	64	36.250	ENSPREG00000009813	rab34b	63	36.250
ENSPREG00000017487	rab12	69	49.704	ENSPREG00000003616	rab1ba	84	49.704
ENSPREG00000017487	rab12	68	41.916	ENSPREG00000007129	RAB39B	78	41.916
ENSPREG00000017487	rab12	83	37.931	ENSPREG00000006119	rab25a	93	37.864
ENSPREG00000017487	rab12	79	40.625	ENSPREG00000014888	rab2a	79	44.048
ENSPREG00000017487	rab12	70	46.512	ENSPREG00000017517	zgc:171927	80	46.512
ENSPREG00000017487	rab12	71	40.462	ENSPREG00000005323	si:dkey-16l2.16	82	40.462
ENSPREG00000017487	rab12	80	47.179	ENSPREG00000004889	-	83	50.857
ENSPREG00000017487	rab12	70	45.930	ENSPREG00000014634	rab30	84	45.930
ENSPREG00000017487	rab12	68	41.667	ENSPREG00000009597	-	78	41.667
ENSPREG00000017487	rab12	57	36.364	ENSPREG00000008951	rab34a	58	36.364
ENSPREG00000017487	rab12	82	36.318	ENSPREG00000021505	rab6a	75	42.308
ENSPREG00000017487	rab12	77	31.959	ENSPREG00000022509	rab23	78	34.132
ENSPREG00000017487	rab12	76	37.368	ENSPREG00000017750	RAB7A	81	36.686
ENSPREG00000017487	rab12	83	38.426	ENSPREG00000014269	rab11bb	80	41.899
ENSPREG00000017487	rab12	83	39.151	ENSPREG00000006336	-	80	42.222
ENSPREG00000017487	rab12	85	39.336	ENSPREG00000010284	rab15	80	45.029
ENSPREG00000017487	rab12	73	37.989	ENSPREG00000022167	-	90	38.547
ENSPREG00000017487	rab12	73	42.458	ENSPREG00000019783	RAB15	85	42.458
ENSPREG00000017487	rab12	70	40.698	ENSPREG00000013962	rab42a	78	40.698
ENSPREG00000017487	rab12	67	47.561	ENSPREG00000005923	rab18a	66	47.561
ENSPREG00000017487	rab12	61	33.775	ENSPREG00000006363	rras	82	33.537
ENSPREG00000017487	rab12	69	37.500	ENSPREG00000010146	rab5c	76	37.500
ENSPREG00000017487	rab12	83	38.095	ENSPREG00000017324	rab11al	76	42.424
ENSPREG00000017487	rab12	65	35.849	ENSPREG00000010920	rab22a	81	35.849
ENSPREG00000017487	rab12	76	37.368	ENSPREG00000012148	RAB7A	81	36.686
ENSPREG00000017487	rab12	70	40.936	ENSPREG00000010154	rab4a	79	40.828
ENSPREG00000017487	rab12	74	38.860	ENSPREG00000000880	rab33ba	81	38.860
ENSPREG00000017487	rab12	66	32.919	ENSPREG00000014761	rabl2	77	32.919
ENSPREG00000017487	rab12	67	34.524	ENSPREG00000006970	rab9b	76	34.524
ENSPREG00000017487	rab12	65	32.704	ENSPREG00000012803	rhebl1	85	32.704
ENSPREG00000017487	rab12	82	32.353	ENSPREG00000012522	-	83	35.714
ENSPREG00000017487	rab12	82	36.816	ENSPREG00000015480	rab6ba	87	38.286
ENSPREG00000017487	rab12	69	51.479	ENSPREG00000020321	rab1ab	83	51.479
ENSPREG00000017487	rab12	81	36.869	ENSPREG00000017344	-	80	39.655

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000017487	rab12	93	81.579	ENSG00000206418	RAB12	100	82.186	Homo_sapiens
ENSPREG00000017487	rab12	89	76.256	ENSAMEG00000007452	RAB12	94	79.909	Ailuropoda_melanoleuca
ENSPREG00000017487	rab12	100	96.311	ENSACIG00000020616	rab12	100	96.311	Amphilophus_citrinellus
ENSPREG00000017487	rab12	100	94.672	ENSAOCG00000002130	rab12	100	94.262	Amphiprion_ocellaris
ENSPREG00000017487	rab12	100	94.672	ENSAPEG00000013255	rab12	100	94.262	Amphiprion_percula
ENSPREG00000017487	rab12	100	94.262	ENSATEG00000019683	rab12	100	93.852	Anabas_testudineus
ENSPREG00000017487	rab12	82	87.500	ENSACAG00000003360	RAB12	88	85.398	Anolis_carolinensis
ENSPREG00000017487	rab12	100	96.721	ENSACLG00000007696	rab12	100	96.721	Astatotilapia_calliptera
ENSPREG00000017487	rab12	100	87.398	ENSAMXG00000004882	rab12	100	88.211	Astyanax_mexicanus
ENSPREG00000017487	rab12	93	82.018	ENSBTAG00000010356	RAB12	100	82.591	Bos_taurus
ENSPREG00000017487	rab12	93	82.018	ENSCJAG00000015468	RAB12	72	82.186	Callithrix_jacchus
ENSPREG00000017487	rab12	93	81.579	ENSCAFG00020023721	RAB12	84	82.186	Canis_lupus_dingo
ENSPREG00000017487	rab12	93	82.018	ENSCHIG00000016103	RAB12	100	82.591	Capra_hircus
ENSPREG00000017487	rab12	85	85.238	ENSCPOG00000022689	RAB12	100	87.619	Cavia_porcellus
ENSPREG00000017487	rab12	93	82.018	ENSCCAG00000022862	RAB12	100	82.186	Cebus_capucinus
ENSPREG00000017487	rab12	91	82.589	ENSCATG00000037784	RAB12	93	85.778	Cercocebus_atys
ENSPREG00000017487	rab12	84	86.829	ENSCSAG00000017569	RAB12	72	81.855	Chlorocebus_sabaeus
ENSPREG00000017487	rab12	93	81.304	ENSCPBG00000028375	RAB12	92	85.841	Chrysemys_picta_bellii
ENSPREG00000017487	rab12	89	82.648	ENSCANG00000031453	RAB12	99	86.301	Colobus_angolensis_palliatus
ENSPREG00000017487	rab12	93	82.895	ENSCGRG00001006958	Rab12	83	81.781	Cricetulus_griseus_chok1gshd
ENSPREG00000017487	rab12	100	95.082	ENSCSEG00000016933	rab12	100	94.672	Cynoglossus_semilaevis
ENSPREG00000017487	rab12	100	96.341	ENSCVAG00000003539	rab12	100	96.341	Cyprinodon_variegatus
ENSPREG00000017487	rab12	100	86.066	ENSDARG00000089428	rab12	95	91.031	Danio_rerio
ENSPREG00000017487	rab12	84	86.341	ENSDNOG00000046064	RAB12	52	85.333	Dasypus_novemcinctus
ENSPREG00000017487	rab12	91	82.589	ENSDORG00000008920	Rab12	99	85.398	Dipodomys_ordii
ENSPREG00000017487	rab12	77	65.608	ENSEBUG00000006581	rab12	92	64.583	Eptatretus_burgeri
ENSPREG00000017487	rab12	93	81.579	ENSEASG00005002926	RAB12	83	81.377	Equus_asinus_asinus
ENSPREG00000017487	rab12	93	81.579	ENSECAG00000007384	RAB12	71	81.377	Equus_caballus
ENSPREG00000017487	rab12	100	88.934	ENSELUG00000007123	rab12	100	88.115	Esox_lucius
ENSPREG00000017487	rab12	93	81.579	ENSFCAG00000027710	RAB12	72	82.186	Felis_catus
ENSPREG00000017487	rab12	100	96.327	ENSFHEG00000004319	rab12	100	96.327	Fundulus_heteroclitus
ENSPREG00000017487	rab12	86	90.952	ENSGMOG00000012335	rab12	87	90.476	Gadus_morhua
ENSPREG00000017487	rab12	92	81.579	ENSGALG00000033608	RAB12	90	85.398	Gallus_gallus
ENSPREG00000017487	rab12	90	91.781	ENSGACG00000016639	rab12	100	91.324	Gasterosteus_aculeatus
ENSPREG00000017487	rab12	93	81.140	ENSGAGG00000007278	RAB12	92	85.841	Gopherus_agassizii
ENSPREG00000017487	rab12	100	96.721	ENSHBUG00000008497	rab12	100	96.721	Haplochromis_burtoni
ENSPREG00000017487	rab12	96	80.169	ENSHGLG00000006189	RAB12	86	86.425	Heterocephalus_glaber_female
ENSPREG00000017487	rab12	100	89.796	ENSHCOG00000012376	rab12	100	88.115	Hippocampus_comes
ENSPREG00000017487	rab12	100	87.295	ENSIPUG00000017401	rab12	100	87.295	Ictalurus_punctatus
ENSPREG00000017487	rab12	89	82.192	ENSSTOG00000025122	RAB12	96	85.845	Ictidomys_tridecemlineatus
ENSPREG00000017487	rab12	91	82.589	ENSJJAG00000019064	Rab12	99	85.778	Jaculus_jaculus
ENSPREG00000017487	rab12	100	90.984	ENSKMAG00000020056	rab12	100	90.164	Kryptolebias_marmoratus
ENSPREG00000017487	rab12	100	95.902	ENSLBEG00000013756	rab12	100	95.902	Labrus_bergylta
ENSPREG00000017487	rab12	90	86.547	ENSLACG00000010461	RAB12	91	85.841	Latimeria_chalumnae
ENSPREG00000017487	rab12	100	83.871	ENSLOCG00000002680	rab12	100	85.887	Lepisosteus_oculatus
ENSPREG00000017487	rab12	93	81.057	ENSMFAG00000043551	RAB12	100	80.894	Macaca_fascicularis
ENSPREG00000017487	rab12	84	86.829	ENSMNEG00000040853	RAB12	89	85.778	Macaca_nemestrina
ENSPREG00000017487	rab12	100	94.262	ENSMAMG00000006862	rab12	100	93.852	Mastacembelus_armatus
ENSPREG00000017487	rab12	100	96.721	ENSMZEG00005024316	rab12	100	96.721	Maylandia_zebra
ENSPREG00000017487	rab12	83	82.843	ENSMGAG00000009197	RAB12	100	86.765	Meleagris_gallopavo
ENSPREG00000017487	rab12	93	82.895	ENSMAUG00000008371	Rab12	83	81.781	Mesocricetus_auratus
ENSPREG00000017487	rab12	91	82.143	ENSMICG00000030661	RAB12	94	85.333	Microcebus_murinus
ENSPREG00000017487	rab12	89	83.105	ENSMOCG00000000452	Rab12	100	86.758	Microtus_ochrogaster
ENSPREG00000017487	rab12	85	86.124	ENSMODG00000021452	RAB12	67	86.222	Monodelphis_domestica
ENSPREG00000017487	rab12	100	91.803	ENSMALG00000015762	rab12	100	91.393	Monopterus_albus
ENSPREG00000017487	rab12	93	83.333	MGP_CAROLIEiJ_G0021839	Rab12	84	81.781	Mus_caroli
ENSPREG00000017487	rab12	93	83.333	ENSMUSG00000023460	Rab12	100	81.781	Mus_musculus
ENSPREG00000017487	rab12	93	83.333	MGP_PahariEiJ_G0020826	Rab12	100	81.781	Mus_pahari
ENSPREG00000017487	rab12	93	83.333	MGP_SPRETEiJ_G0022750	Rab12	83	81.781	Mus_spretus
ENSPREG00000017487	rab12	100	78.138	ENSMLUG00000002883	RAB12	100	81.377	Myotis_lucifugus
ENSPREG00000017487	rab12	94	79.828	ENSNGAG00000024103	-	96	85.333	Nannospalax_galili
ENSPREG00000017487	rab12	91	75.446	ENSNGAG00000019722	-	92	75.111	Nannospalax_galili
ENSPREG00000017487	rab12	100	96.721	ENSNBRG00000014428	rab12	100	96.721	Neolamprologus_brichardi
ENSPREG00000017487	rab12	93	81.579	ENSNLEG00000006939	RAB12	100	82.186	Nomascus_leucogenys
ENSPREG00000017487	rab12	100	79.032	ENSMEUG00000000493	RAB12	91	86.222	Notamacropus_eugenii
ENSPREG00000017487	rab12	89	83.562	ENSODEG00000006414	RAB12	100	87.215	Octodon_degus
ENSPREG00000017487	rab12	100	96.721	ENSONIG00000018469	rab12	100	96.721	Oreochromis_niloticus
ENSPREG00000017487	rab12	100	94.262	ENSORLG00000003902	rab12	100	93.852	Oryzias_latipes
ENSPREG00000017487	rab12	100	95.902	ENSORLG00020005131	rab12	100	95.902	Oryzias_latipes_hni
ENSPREG00000017487	rab12	100	94.262	ENSORLG00015007869	rab12	100	93.852	Oryzias_latipes_hsok
ENSPREG00000017487	rab12	100	96.311	ENSOMEG00000008191	rab12	100	96.311	Oryzias_melastigma
ENSPREG00000017487	rab12	85	82.857	ENSOGAG00000028002	RAB12	99	86.667	Otolemur_garnettii
ENSPREG00000017487	rab12	78	87.435	ENSOARG00000000728	RAB12	88	85.581	Ovis_aries
ENSPREG00000017487	rab12	84	82.609	ENSPPAG00000009152	RAB12	97	86.893	Pan_paniscus
ENSPREG00000017487	rab12	93	81.579	ENSPPRG00000024521	RAB12	100	82.186	Panthera_pardus
ENSPREG00000017487	rab12	93	81.579	ENSPTRG00000009853	RAB12	100	82.186	Pan_troglodytes
ENSPREG00000017487	rab12	93	82.895	ENSPANG00000009320	RAB12	100	82.591	Papio_anubis
ENSPREG00000017487	rab12	100	86.939	ENSPKIG00000008579	rab12	100	86.939	Paramormyrops_kingsleyae
ENSPREG00000017487	rab12	100	90.574	ENSPMGG00000001890	rab12	100	90.574	Periophthalmus_magnuspinnatus
ENSPREG00000017487	rab12	93	82.456	ENSPEMG00000021032	Rab12	84	81.377	Peromyscus_maniculatus_bairdii
ENSPREG00000017487	rab12	88	85.253	ENSPCIG00000010453	RAB12	56	86.222	Phascolarctos_cinereus
ENSPREG00000017487	rab12	100	99.590	ENSPFOG00000001579	rab12	100	99.590	Poecilia_formosa
ENSPREG00000017487	rab12	100	99.590	ENSPLAG00000013594	rab12	100	99.590	Poecilia_latipinna
ENSPREG00000017487	rab12	100	99.590	ENSPMEG00000010417	rab12	100	99.590	Poecilia_mexicana
ENSPREG00000017487	rab12	93	81.579	ENSPPYG00000009015	-	72	82.186	Pongo_abelii
ENSPREG00000017487	rab12	93	81.579	ENSPCAG00000015007	RAB12	100	81.781	Procavia_capensis
ENSPREG00000017487	rab12	93	81.579	ENSPCOG00000019816	RAB12	100	82.186	Propithecus_coquereli
ENSPREG00000017487	rab12	93	82.018	ENSPVAG00000002757	RAB12	100	82.591	Pteropus_vampyrus
ENSPREG00000017487	rab12	100	96.721	ENSPNYG00000005654	rab12	100	96.721	Pundamilia_nyererei
ENSPREG00000017487	rab12	100	96.721	ENSPNYG00000023905	rab12	100	96.721	Pundamilia_nyererei
ENSPREG00000017487	rab12	100	86.585	ENSPNAG00000015031	rab12	100	87.398	Pygocentrus_nattereri
ENSPREG00000017487	rab12	93	80.786	ENSRNOG00000019295	Rab12	91	79.913	Rattus_norvegicus
ENSPREG00000017487	rab12	91	82.589	ENSRBIG00000028760	RAB12	97	85.778	Rhinopithecus_bieti
ENSPREG00000017487	rab12	91	82.589	ENSRROG00000019249	RAB12	94	85.778	Rhinopithecus_roxellana
ENSPREG00000017487	rab12	94	77.922	ENSSBOG00000021125	RAB12	80	86.603	Saimiri_boliviensis_boliviensis
ENSPREG00000017487	rab12	93	82.018	ENSSHAG00000001489	RAB12	91	86.341	Sarcophilus_harrisii
ENSPREG00000017487	rab12	100	93.033	ENSSMAG00000012678	rab12	100	92.623	Scophthalmus_maximus
ENSPREG00000017487	rab12	100	95.492	ENSSDUG00000008505	rab12	100	95.492	Seriola_dumerili
ENSPREG00000017487	rab12	100	95.492	ENSSLDG00000022239	rab12	100	95.492	Seriola_lalandi_dorsalis
ENSPREG00000017487	rab12	83	87.745	ENSSPUG00000003222	RAB12	92	86.283	Sphenodon_punctatus
ENSPREG00000017487	rab12	100	95.082	ENSSPAG00000010822	rab12	100	94.672	Stegastes_partitus
ENSPREG00000017487	rab12	100	80.162	ENSSSCG00000038026	RAB12	100	82.996	Sus_scrofa
ENSPREG00000017487	rab12	93	80.087	ENSTGUG00000009889	RAB12	100	81.200	Taeniopygia_guttata
ENSPREG00000017487	rab12	100	90.574	ENSTRUG00000024455	rab12	100	89.754	Takifugu_rubripes
ENSPREG00000017487	rab12	100	92.213	ENSTNIG00000014859	rab12	100	91.393	Tetraodon_nigroviridis
ENSPREG00000017487	rab12	89	82.648	ENSTTRG00000008711	RAB12	99	86.301	Tursiops_truncatus
ENSPREG00000017487	rab12	93	81.579	ENSUAMG00000018092	RAB12	100	82.186	Ursus_americanus
ENSPREG00000017487	rab12	90	81.900	ENSVVUG00000011748	RAB12	99	85.520	Vulpes_vulpes
ENSPREG00000017487	rab12	95	82.553	ENSXETG00000004289	rab12	79	82.258	Xenopus_tropicalis
ENSPREG00000017487	rab12	100	97.951	ENSXCOG00000019310	rab12	100	97.951	Xiphophorus_couchianus
ENSPREG00000017487	rab12	100	98.361	ENSXMAG00000023617	rab12	100	98.361	Xiphophorus_maculatus