EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000017517 (Gene tree)
Gene ID: 103475093
Gene Symbol: zgc:171927
Alias: -
Full Name: ras-related protein Rab-1B-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 4625 bases
Position: chrLG13:30421806-30426430
Accession: 103475093
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000025944	MMR_HSR1	PF01926.23	6.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000026202	-	645	XM_008426496	ENSPREP00000025944	214 (aa)	XP_008424718	UPI0004A237F0

Gene Model

Click here to download ENSPREG00000017517's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000017517's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000017517	zgc:171927	76	37.209	ENSPREG00000006970	rab9b	78	37.209
ENSPREG00000017517	zgc:171927	100	72.430	ENSPREG00000003616	rab1ba	100	72.430
ENSPREG00000017517	zgc:171927	84	49.462	ENSPREG00000014634	rab30	92	49.462
ENSPREG00000017517	zgc:171927	77	39.645	ENSPREG00000017750	RAB7A	82	39.645
ENSPREG00000017517	zgc:171927	93	76.500	ENSPREG00000004889	-	93	76.500
ENSPREG00000017517	zgc:171927	78	38.012	ENSPREG00000001832	rab9a	83	38.012
ENSPREG00000017517	zgc:171927	77	41.212	ENSPREG00000010920	rab22a	83	41.212
ENSPREG00000017517	zgc:171927	62	33.103	ENSPREG00000019667	arfrp1	71	33.103
ENSPREG00000017517	zgc:171927	57	32.000	ENSPREG00000011615	arl4d	61	32.000
ENSPREG00000017517	zgc:171927	79	53.571	ENSPREG00000009605	rab11a	78	53.571
ENSPREG00000017517	zgc:171927	86	54.645	ENSPREG00000017567	rab13	95	52.792
ENSPREG00000017517	zgc:171927	77	48.485	ENSPREG00000019783	RAB15	79	48.485
ENSPREG00000017517	zgc:171927	96	35.484	ENSPREG00000001864	-	89	35.747
ENSPREG00000017517	zgc:171927	75	40.373	ENSPREG00000009535	RAB41	76	40.373
ENSPREG00000017517	zgc:171927	55	36.134	ENSPREG00000016664	rap2b	93	36.641
ENSPREG00000017517	zgc:171927	98	41.429	ENSPREG00000017337	rab25b	96	41.429
ENSPREG00000017517	zgc:171927	92	78.000	ENSPREG00000020321	rab1ab	99	78.000
ENSPREG00000017517	zgc:171927	99	44.076	ENSPREG00000006336	-	96	44.076
ENSPREG00000017517	zgc:171927	81	46.243	ENSPREG00000010154	rab4a	81	46.243
ENSPREG00000017517	zgc:171927	75	51.852	ENSPREG00000005923	rab18a	65	51.852
ENSPREG00000017517	zgc:171927	99	43.602	ENSPREG00000014269	rab11bb	96	43.602
ENSPREG00000017517	zgc:171927	73	36.478	ENSPREG00000014761	rabl2	75	36.478
ENSPREG00000017517	zgc:171927	72	37.736	ENSPREG00000012522	-	79	37.736
ENSPREG00000017517	zgc:171927	77	39.645	ENSPREG00000012148	RAB7A	82	39.645
ENSPREG00000017517	zgc:171927	80	46.512	ENSPREG00000017487	rab12	70	46.512
ENSPREG00000017517	zgc:171927	83	34.270	ENSPREG00000006363	rras	92	35.450
ENSPREG00000017517	zgc:171927	75	40.000	ENSPREG00000022241	si:dkey-13a21.4	80	40.000
ENSPREG00000017517	zgc:171927	81	32.571	ENSPREG00000012803	rhebl1	93	32.571
ENSPREG00000017517	zgc:171927	83	36.872	ENSPREG00000019341	hrasb	93	36.872
ENSPREG00000017517	zgc:171927	79	43.452	ENSPREG00000022167	-	79	45.806
ENSPREG00000017517	zgc:171927	98	41.509	ENSPREG00000006119	rab25a	96	39.810
ENSPREG00000017517	zgc:171927	77	34.320	ENSPREG00000020276	RAB29	82	34.320
ENSPREG00000017517	zgc:171927	79	42.857	ENSPREG00000000880	rab33ba	77	42.857
ENSPREG00000017517	zgc:171927	99	44.076	ENSPREG00000006357	rab11ba	75	44.076
ENSPREG00000017517	zgc:171927	79	45.294	ENSPREG00000017344	-	79	45.294
ENSPREG00000017517	zgc:171927	77	38.788	ENSPREG00000018287	KRAS	91	38.150
ENSPREG00000017517	zgc:171927	76	46.012	ENSPREG00000010146	rab5c	85	44.211
ENSPREG00000017517	zgc:171927	55	32.203	ENSPREG00000004992	arl8a	61	32.203
ENSPREG00000017517	zgc:171927	73	36.076	ENSPREG00000022509	rab23	87	34.270
ENSPREG00000017517	zgc:171927	77	35.928	ENSPREG00000016102	si:ch73-116o1.2	80	35.928
ENSPREG00000017517	zgc:171927	81	33.143	ENSPREG00000010752	rheb	90	33.143
ENSPREG00000017517	zgc:171927	90	35.417	ENSPREG00000015480	rab6ba	94	35.417
ENSPREG00000017517	zgc:171927	75	40.373	ENSPREG00000021505	rab6a	77	40.373
ENSPREG00000017517	zgc:171927	99	43.602	ENSPREG00000017324	rab11al	96	43.602
ENSPREG00000017517	zgc:171927	66	30.201	ENSPREG00000000912	-	81	30.201
ENSPREG00000017517	zgc:171927	55	30.252	ENSPREG00000015645	arl4cb	61	30.252
ENSPREG00000017517	zgc:171927	79	50.296	ENSPREG00000010284	rab15	79	50.296
ENSPREG00000017517	zgc:171927	79	43.860	ENSPREG00000013962	rab42a	78	43.860
ENSPREG00000017517	zgc:171927	74	40.123	ENSPREG00000009813	rab34b	63	40.123
ENSPREG00000017517	zgc:171927	83	44.134	ENSPREG00000009597	-	84	44.134
ENSPREG00000017517	zgc:171927	78	46.821	ENSPREG00000007017	zgc:101559	74	46.821
ENSPREG00000017517	zgc:171927	83	32.308	ENSPREG00000006055	rasl11a	75	32.308
ENSPREG00000017517	zgc:171927	79	50.296	ENSPREG00000014888	rab2a	80	50.296
ENSPREG00000017517	zgc:171927	83	44.693	ENSPREG00000007129	RAB39B	84	44.693
ENSPREG00000017517	zgc:171927	76	64.198	ENSPREG00000005323	si:dkey-16l2.16	77	64.198

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000017517	zgc:171927	100	94.393	ENSAPOG00000004980	-	100	94.393	Acanthochromis_polyacanthus
ENSPREG00000017517	zgc:171927	100	93.925	ENSACIG00000009006	zgc:171927	100	93.925	Amphilophus_citrinellus
ENSPREG00000017517	zgc:171927	71	89.677	ENSAOCG00000013808	-	93	98.347	Amphiprion_ocellaris
ENSPREG00000017517	zgc:171927	100	91.589	ENSAOCG00000024149	-	100	91.589	Amphiprion_ocellaris
ENSPREG00000017517	zgc:171927	100	92.056	ENSAPEG00000022171	zgc:171927	99	92.056	Amphiprion_percula
ENSPREG00000017517	zgc:171927	100	92.991	ENSATEG00000003430	zgc:171927	100	92.991	Anabas_testudineus
ENSPREG00000017517	zgc:171927	100	93.925	ENSACLG00000013734	-	100	93.925	Astatotilapia_calliptera
ENSPREG00000017517	zgc:171927	100	78.605	ENSAMXG00000039486	zgc:171927	100	78.605	Astyanax_mexicanus
ENSPREG00000017517	zgc:171927	100	89.720	ENSCSEG00000014416	zgc:171927	100	89.720	Cynoglossus_semilaevis
ENSPREG00000017517	zgc:171927	100	94.393	ENSCVAG00000009222	zgc:171927	100	94.393	Cyprinodon_variegatus
ENSPREG00000017517	zgc:171927	100	78.140	ENSDARG00000033056	zgc:171927	100	78.140	Danio_rerio
ENSPREG00000017517	zgc:171927	100	79.630	ENSELUG00000011680	zgc:171927	100	79.630	Esox_lucius
ENSPREG00000017517	zgc:171927	100	94.860	ENSFHEG00000022176	zgc:171927	100	94.860	Fundulus_heteroclitus
ENSPREG00000017517	zgc:171927	98	78.199	ENSGMOG00000004979	-	97	78.199	Gadus_morhua
ENSPREG00000017517	zgc:171927	98	97.129	ENSGAFG00000015702	zgc:171927	84	97.129	Gambusia_affinis
ENSPREG00000017517	zgc:171927	100	90.654	ENSGACG00000013401	zgc:171927	99	90.654	Gasterosteus_aculeatus
ENSPREG00000017517	zgc:171927	100	93.925	ENSHBUG00000002397	-	100	93.925	Haplochromis_burtoni
ENSPREG00000017517	zgc:171927	100	93.458	ENSKMAG00000009856	zgc:171927	100	93.458	Kryptolebias_marmoratus
ENSPREG00000017517	zgc:171927	100	91.121	ENSLBEG00000005791	-	100	91.121	Labrus_bergylta
ENSPREG00000017517	zgc:171927	98	90.431	ENSLBEG00000027226	-	89	90.431	Labrus_bergylta
ENSPREG00000017517	zgc:171927	98	72.381	ENSLOCG00000014692	zgc:171927	96	72.381	Lepisosteus_oculatus
ENSPREG00000017517	zgc:171927	100	91.589	ENSMAMG00000020135	zgc:171927	100	91.589	Mastacembelus_armatus
ENSPREG00000017517	zgc:171927	100	93.925	ENSMZEG00005024685	-	100	93.925	Maylandia_zebra
ENSPREG00000017517	zgc:171927	100	87.850	ENSMMOG00000009833	-	100	87.850	Mola_mola
ENSPREG00000017517	zgc:171927	100	90.187	ENSMALG00000021129	zgc:171927	100	90.187	Monopterus_albus
ENSPREG00000017517	zgc:171927	100	93.458	ENSNBRG00000006202	zgc:171927	100	93.458	Neolamprologus_brichardi
ENSPREG00000017517	zgc:171927	100	90.654	ENSORLG00000000602	zgc:171927	100	90.654	Oryzias_latipes
ENSPREG00000017517	zgc:171927	100	90.654	ENSORLG00020021071	zgc:171927	100	90.654	Oryzias_latipes_hni
ENSPREG00000017517	zgc:171927	100	90.654	ENSORLG00015010098	zgc:171927	100	90.654	Oryzias_latipes_hsok
ENSPREG00000017517	zgc:171927	100	92.056	ENSOMEG00000020594	zgc:171927	100	92.056	Oryzias_melastigma
ENSPREG00000017517	zgc:171927	100	99.065	ENSPFOG00000013810	zgc:171927	99	99.065	Poecilia_formosa
ENSPREG00000017517	zgc:171927	100	98.131	ENSPLAG00000005869	zgc:171927	100	98.131	Poecilia_latipinna
ENSPREG00000017517	zgc:171927	100	99.065	ENSPMEG00000022350	zgc:171927	100	99.065	Poecilia_mexicana
ENSPREG00000017517	zgc:171927	100	93.925	ENSPNYG00000007520	-	100	93.925	Pundamilia_nyererei
ENSPREG00000017517	zgc:171927	100	79.070	ENSPNAG00000029574	zgc:171927	100	79.070	Pygocentrus_nattereri
ENSPREG00000017517	zgc:171927	100	77.674	ENSSFOG00015005464	zgc:171927	99	77.674	Scleropages_formosus
ENSPREG00000017517	zgc:171927	100	90.654	ENSSMAG00000004416	-	100	90.654	Scophthalmus_maximus
ENSPREG00000017517	zgc:171927	100	94.393	ENSSDUG00000004445	zgc:171927	100	94.393	Seriola_dumerili
ENSPREG00000017517	zgc:171927	100	94.393	ENSSLDG00000018024	zgc:171927	100	94.393	Seriola_lalandi_dorsalis
ENSPREG00000017517	zgc:171927	100	93.458	ENSSPAG00000013533	zgc:171927	100	93.458	Stegastes_partitus
ENSPREG00000017517	zgc:171927	100	98.131	ENSXCOG00000010695	zgc:171927	100	98.131	Xiphophorus_couchianus
ENSPREG00000017517	zgc:171927	100	98.598	ENSXMAG00000004683	zgc:171927	100	98.598	Xiphophorus_maculatus