EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000017572 (Gene tree)
Gene ID: 103477576
Gene Symbol: rbm8a
Alias: fb34f03|wu:fb34f03|zgc:110525
Full Name: RNA binding motif protein 8A
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 2534 bases
Position: chrLG16:2159861-2162394
Accession: 103477576
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000026004	RRM_1	PF00076.22	2.1e-19	1	1
ENSPREP00000026004	RRM_3	PF08777.11	3.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000026265	-	483	XM_008430747	ENSPREP00000026004	160 (aa)	XP_008428969	-

Gene Model

Click here to download ENSPREG00000017572's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03013	RNA transport	KEGG
pret03015	mRNA surveillance pathway	KEGG
pret03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000017572's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000017572	rbm8a	63	30.928	ENSPREG00000017160	ELAVL2	65	30.928
ENSPREG00000017572	rbm8a	56	34.667	ENSPREG00000018937	elavl4	62	34.667
ENSPREG00000017572	rbm8a	52	33.333	ENSPREG00000006971	elavl3	67	33.333
ENSPREG00000017572	rbm8a	51	30.000	ENSPREG00000005877	-	51	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000017572	rbm8a	94	91.391	ENSG00000265241	RBM8A	92	91.250	Homo_sapiens
ENSPREG00000017572	rbm8a	100	96.250	ENSAPOG00000009727	rbm8a	91	96.250	Acanthochromis_polyacanthus
ENSPREG00000017572	rbm8a	94	89.610	ENSAMEG00000017623	RBM8A	92	89.571	Ailuropoda_melanoleuca
ENSPREG00000017572	rbm8a	100	96.875	ENSACIG00000017678	rbm8a	100	96.875	Amphilophus_citrinellus
ENSPREG00000017572	rbm8a	100	96.250	ENSAOCG00000023887	rbm8a	77	96.250	Amphiprion_ocellaris
ENSPREG00000017572	rbm8a	100	96.250	ENSAPEG00000022847	rbm8a	77	96.250	Amphiprion_percula
ENSPREG00000017572	rbm8a	100	96.250	ENSATEG00000005630	rbm8a	91	96.250	Anabas_testudineus
ENSPREG00000017572	rbm8a	94	91.391	ENSANAG00000004525	RBM8A	92	91.250	Aotus_nancymaae
ENSPREG00000017572	rbm8a	100	96.875	ENSACLG00000009627	rbm8a	91	96.875	Astatotilapia_calliptera
ENSPREG00000017572	rbm8a	94	94.040	ENSAMXG00000040754	rbm8a	92	93.750	Astyanax_mexicanus
ENSPREG00000017572	rbm8a	81	57.252	WBGene00004387	rnp-4	88	58.730	Caenorhabditis_elegans
ENSPREG00000017572	rbm8a	94	91.391	ENSCJAG00000046869	RBM8A	92	91.250	Callithrix_jacchus
ENSPREG00000017572	rbm8a	94	91.391	ENSCAFG00000023172	RBM8A	92	91.250	Canis_familiaris
ENSPREG00000017572	rbm8a	94	91.391	ENSCAFG00020019945	RBM8A	92	91.250	Canis_lupus_dingo
ENSPREG00000017572	rbm8a	94	91.391	ENSCHIG00000012114	RBM8A	92	91.250	Capra_hircus
ENSPREG00000017572	rbm8a	94	91.391	ENSTSYG00000028809	RBM8A	92	91.250	Carlito_syrichta
ENSPREG00000017572	rbm8a	68	90.826	ENSCAPG00000014086	RBM8A	89	90.826	Cavia_aperea
ENSPREG00000017572	rbm8a	99	91.139	ENSCPOG00000022453	RBM8A	95	91.195	Cavia_porcellus
ENSPREG00000017572	rbm8a	94	90.728	ENSCCAG00000022460	-	92	90.625	Cebus_capucinus
ENSPREG00000017572	rbm8a	94	91.391	ENSCCAG00000028589	-	92	91.250	Cebus_capucinus
ENSPREG00000017572	rbm8a	94	91.391	ENSCATG00000021691	RBM8A	92	91.250	Cercocebus_atys
ENSPREG00000017572	rbm8a	94	91.391	ENSCLAG00000000547	RBM8A	92	91.250	Chinchilla_lanigera
ENSPREG00000017572	rbm8a	94	91.391	ENSCSAG00000001779	RBM8A	92	91.250	Chlorocebus_sabaeus
ENSPREG00000017572	rbm8a	94	91.391	ENSCPBG00000007941	RBM8A	74	91.250	Chrysemys_picta_bellii
ENSPREG00000017572	rbm8a	99	63.924	ENSCING00000004877	-	95	63.750	Ciona_intestinalis
ENSPREG00000017572	rbm8a	97	65.161	ENSCSAVG00000005685	-	95	64.375	Ciona_savignyi
ENSPREG00000017572	rbm8a	94	91.391	ENSCANG00000042182	RBM8A	92	91.250	Colobus_angolensis_palliatus
ENSPREG00000017572	rbm8a	97	76.129	ENSCGRG00001003032	-	92	76.250	Cricetulus_griseus_chok1gshd
ENSPREG00000017572	rbm8a	94	91.391	ENSCGRG00001002681	-	92	91.250	Cricetulus_griseus_chok1gshd
ENSPREG00000017572	rbm8a	94	91.391	ENSCGRG00000006832	-	92	91.250	Cricetulus_griseus_crigri
ENSPREG00000017572	rbm8a	100	96.875	ENSCSEG00000011865	rbm8a	91	96.875	Cynoglossus_semilaevis
ENSPREG00000017572	rbm8a	100	97.500	ENSCVAG00000020734	rbm8a	91	97.500	Cyprinodon_variegatus
ENSPREG00000017572	rbm8a	97	93.548	ENSDARG00000016516	rbm8a	92	93.125	Danio_rerio
ENSPREG00000017572	rbm8a	57	85.714	ENSDNOG00000025265	-	100	85.714	Dasypus_novemcinctus
ENSPREG00000017572	rbm8a	94	91.391	ENSDORG00000027340	-	100	84.795	Dipodomys_ordii
ENSPREG00000017572	rbm8a	99	62.963	FBgn0033378	tsu	96	62.963	Drosophila_melanogaster
ENSPREG00000017572	rbm8a	97	76.774	ENSETEG00000017932	-	92	76.875	Echinops_telfairi
ENSPREG00000017572	rbm8a	89	86.111	ENSETEG00000008411	-	82	86.111	Echinops_telfairi
ENSPREG00000017572	rbm8a	98	82.166	ENSEBUG00000010386	rbm8a	91	81.875	Eptatretus_burgeri
ENSPREG00000017572	rbm8a	94	91.391	ENSEASG00005007455	RBM8A	92	91.250	Equus_asinus_asinus
ENSPREG00000017572	rbm8a	94	91.391	ENSECAG00000022024	RBM8A	92	91.250	Equus_caballus
ENSPREG00000017572	rbm8a	94	62.914	ENSEEUG00000008823	RBM8A	92	64.375	Erinaceus_europaeus
ENSPREG00000017572	rbm8a	97	93.548	ENSELUG00000012464	rbm8a	91	93.125	Esox_lucius
ENSPREG00000017572	rbm8a	94	90.728	ENSFCAG00000033936	RBM8A	92	90.625	Felis_catus
ENSPREG00000017572	rbm8a	94	91.391	ENSFDAG00000020821	RBM8A	92	91.250	Fukomys_damarensis
ENSPREG00000017572	rbm8a	100	98.125	ENSFHEG00000013538	rbm8a	91	98.125	Fundulus_heteroclitus
ENSPREG00000017572	rbm8a	87	91.367	ENSGMOG00000007353	rbm8a	90	90.972	Gadus_morhua
ENSPREG00000017572	rbm8a	94	77.483	ENSGALG00000036283	RBM8A	91	78.125	Gallus_gallus
ENSPREG00000017572	rbm8a	100	100.000	ENSGAFG00000021698	rbm8a	91	100.000	Gambusia_affinis
ENSPREG00000017572	rbm8a	87	94.964	ENSGACG00000013157	rbm8a	90	95.035	Gasterosteus_aculeatus
ENSPREG00000017572	rbm8a	94	91.391	ENSGAGG00000023769	RBM8A	92	91.250	Gopherus_agassizii
ENSPREG00000017572	rbm8a	94	91.391	ENSGGOG00000037248	RBM8A	92	91.250	Gorilla_gorilla
ENSPREG00000017572	rbm8a	100	96.875	ENSHBUG00000008827	rbm8a	100	96.875	Haplochromis_burtoni
ENSPREG00000017572	rbm8a	94	91.391	ENSHGLG00000007303	RBM8A	92	91.250	Heterocephalus_glaber_female
ENSPREG00000017572	rbm8a	94	91.391	ENSHGLG00100012468	RBM8A	92	91.250	Heterocephalus_glaber_male
ENSPREG00000017572	rbm8a	98	94.231	ENSHCOG00000010122	rbm8a	91	93.125	Hippocampus_comes
ENSPREG00000017572	rbm8a	97	92.258	ENSIPUG00000006525	rbm8a	82	91.875	Ictalurus_punctatus
ENSPREG00000017572	rbm8a	94	91.391	ENSSTOG00000013917	RBM8A	92	91.250	Ictidomys_tridecemlineatus
ENSPREG00000017572	rbm8a	94	91.391	ENSJJAG00000009488	-	92	91.250	Jaculus_jaculus
ENSPREG00000017572	rbm8a	100	97.500	ENSKMAG00000014454	rbm8a	91	97.500	Kryptolebias_marmoratus
ENSPREG00000017572	rbm8a	99	95.570	ENSLBEG00000015720	rbm8a	91	95.625	Labrus_bergylta
ENSPREG00000017572	rbm8a	97	90.446	ENSLACG00000014365	RBM8A	92	90.123	Latimeria_chalumnae
ENSPREG00000017572	rbm8a	97	94.839	ENSLOCG00000009082	rbm8a	92	94.375	Lepisosteus_oculatus
ENSPREG00000017572	rbm8a	100	66.061	ENSLAFG00000011031	-	92	63.030	Loxodonta_africana
ENSPREG00000017572	rbm8a	97	91.613	ENSLAFG00000021886	-	92	91.250	Loxodonta_africana
ENSPREG00000017572	rbm8a	94	91.391	ENSMFAG00000045376	RBM8A	92	91.250	Macaca_fascicularis
ENSPREG00000017572	rbm8a	100	86.826	ENSMMUG00000016051	RBM8A	100	86.826	Macaca_mulatta
ENSPREG00000017572	rbm8a	94	91.391	ENSMNEG00000040422	RBM8A	92	91.250	Macaca_nemestrina
ENSPREG00000017572	rbm8a	94	91.391	ENSMLEG00000039155	RBM8A	92	91.250	Mandrillus_leucophaeus
ENSPREG00000017572	rbm8a	99	94.937	ENSMAMG00000010565	rbm8a	91	95.000	Mastacembelus_armatus
ENSPREG00000017572	rbm8a	100	96.875	ENSMZEG00005016453	rbm8a	91	96.875	Maylandia_zebra
ENSPREG00000017572	rbm8a	94	91.391	ENSMAUG00000016783	-	100	85.294	Mesocricetus_auratus
ENSPREG00000017572	rbm8a	94	91.391	ENSMICG00000031698	-	92	91.250	Microcebus_murinus
ENSPREG00000017572	rbm8a	100	73.750	ENSMICG00000037163	-	99	73.750	Microcebus_murinus
ENSPREG00000017572	rbm8a	94	91.391	ENSMOCG00000017782	-	92	91.250	Microtus_ochrogaster
ENSPREG00000017572	rbm8a	100	82.500	ENSMMOG00000017179	rbm8a	94	82.500	Mola_mola
ENSPREG00000017572	rbm8a	94	92.053	ENSMODG00000018752	RBM8A	92	91.875	Monodelphis_domestica
ENSPREG00000017572	rbm8a	99	93.038	ENSMALG00000010145	rbm8a	91	93.125	Monopterus_albus
ENSPREG00000017572	rbm8a	94	88.742	MGP_CAROLIEiJ_G0014951	Rbm8a2	92	88.750	Mus_caroli
ENSPREG00000017572	rbm8a	94	91.391	MGP_CAROLIEiJ_G0025383	Rbm8a	100	84.795	Mus_caroli
ENSPREG00000017572	rbm8a	94	91.391	ENSMUSG00000038374	Rbm8a	100	84.795	Mus_musculus
ENSPREG00000017572	rbm8a	94	89.404	ENSMUSG00000078184	Rbm8a2	92	89.375	Mus_musculus
ENSPREG00000017572	rbm8a	94	91.391	MGP_PahariEiJ_G0026828	-	100	84.795	Mus_pahari
ENSPREG00000017572	rbm8a	94	91.391	MGP_SPRETEiJ_G0026330	Rbm8a	100	84.795	Mus_spretus
ENSPREG00000017572	rbm8a	94	91.391	ENSMPUG00000000775	RBM8A	92	91.250	Mustela_putorius_furo
ENSPREG00000017572	rbm8a	94	83.444	ENSMLUG00000022711	-	92	83.125	Myotis_lucifugus
ENSPREG00000017572	rbm8a	94	91.391	ENSMLUG00000017436	-	92	91.250	Myotis_lucifugus
ENSPREG00000017572	rbm8a	97	91.613	ENSNGAG00000016038	-	92	91.250	Nannospalax_galili
ENSPREG00000017572	rbm8a	100	96.875	ENSNBRG00000004541	rbm8a	91	96.875	Neolamprologus_brichardi
ENSPREG00000017572	rbm8a	94	91.391	ENSNLEG00000029632	RBM8A	92	91.250	Nomascus_leucogenys
ENSPREG00000017572	rbm8a	68	92.593	ENSMEUG00000016058	RBM8A	89	92.308	Notamacropus_eugenii
ENSPREG00000017572	rbm8a	71	92.105	ENSOPRG00000013316	RBM8A	100	92.105	Ochotona_princeps
ENSPREG00000017572	rbm8a	94	91.391	ENSODEG00000000114	-	92	91.250	Octodon_degus
ENSPREG00000017572	rbm8a	94	76.821	ENSODEG00000002094	-	91	77.500	Octodon_degus
ENSPREG00000017572	rbm8a	94	78.146	ENSODEG00000008563	-	92	78.750	Octodon_degus
ENSPREG00000017572	rbm8a	100	96.875	ENSONIG00000008608	rbm8a	91	96.875	Oreochromis_niloticus
ENSPREG00000017572	rbm8a	94	89.610	ENSOCUG00000025693	RBM8A	92	89.571	Oryctolagus_cuniculus
ENSPREG00000017572	rbm8a	99	94.937	ENSORLG00000016263	rbm8a	91	95.000	Oryzias_latipes
ENSPREG00000017572	rbm8a	100	95.000	ENSORLG00020012904	rbm8a	85	95.000	Oryzias_latipes_hni
ENSPREG00000017572	rbm8a	99	94.937	ENSORLG00015018824	rbm8a	91	95.000	Oryzias_latipes_hsok
ENSPREG00000017572	rbm8a	99	95.570	ENSOMEG00000021533	rbm8a	71	95.625	Oryzias_melastigma
ENSPREG00000017572	rbm8a	94	89.610	ENSOGAG00000000202	RBM8A	92	89.571	Otolemur_garnettii
ENSPREG00000017572	rbm8a	94	90.728	ENSOARG00000020634	RBM8A	92	90.625	Ovis_aries
ENSPREG00000017572	rbm8a	94	91.391	ENSPPAG00000029116	RBM8A	92	91.250	Pan_paniscus
ENSPREG00000017572	rbm8a	94	90.728	ENSPPRG00000008243	RBM8A	92	90.625	Panthera_pardus
ENSPREG00000017572	rbm8a	94	91.391	ENSPTIG00000009472	RBM8A	92	91.250	Panthera_tigris_altaica
ENSPREG00000017572	rbm8a	94	91.391	ENSPTRG00000001201	RBM8A	92	91.250	Pan_troglodytes
ENSPREG00000017572	rbm8a	94	91.391	ENSPANG00000020584	RBM8A	92	91.250	Papio_anubis
ENSPREG00000017572	rbm8a	97	90.323	ENSPKIG00000020558	rbm8a	92	90.000	Paramormyrops_kingsleyae
ENSPREG00000017572	rbm8a	98	92.357	ENSPKIG00000009551	rbm8a	68	91.875	Paramormyrops_kingsleyae
ENSPREG00000017572	rbm8a	100	96.250	ENSPMGG00000010122	rbm8a	91	96.250	Periophthalmus_magnuspinnatus
ENSPREG00000017572	rbm8a	94	91.391	ENSPEMG00000018117	-	92	91.250	Peromyscus_maniculatus_bairdii
ENSPREG00000017572	rbm8a	94	92.053	ENSPCIG00000011931	RBM8A	92	91.875	Phascolarctos_cinereus
ENSPREG00000017572	rbm8a	100	99.375	ENSPFOG00000010695	rbm8a	91	99.375	Poecilia_formosa
ENSPREG00000017572	rbm8a	100	99.375	ENSPLAG00000009183	rbm8a	91	99.375	Poecilia_latipinna
ENSPREG00000017572	rbm8a	100	99.375	ENSPMEG00000013950	rbm8a	91	99.375	Poecilia_mexicana
ENSPREG00000017572	rbm8a	94	91.391	ENSPPYG00000000929	RBM8A	92	91.250	Pongo_abelii
ENSPREG00000017572	rbm8a	97	90.968	ENSPCAG00000002146	-	92	90.625	Procavia_capensis
ENSPREG00000017572	rbm8a	94	91.391	ENSPCOG00000022886	RBM8A	92	91.250	Propithecus_coquereli
ENSPREG00000017572	rbm8a	94	91.391	ENSPVAG00000014471	RBM8A	92	91.250	Pteropus_vampyrus
ENSPREG00000017572	rbm8a	100	96.875	ENSPNYG00000013564	rbm8a	91	96.875	Pundamilia_nyererei
ENSPREG00000017572	rbm8a	97	95.484	ENSPNAG00000028502	rbm8a	92	95.000	Pygocentrus_nattereri
ENSPREG00000017572	rbm8a	94	91.391	ENSRNOG00000021215	Rbm8a	92	91.250	Rattus_norvegicus
ENSPREG00000017572	rbm8a	94	90.728	ENSRBIG00000039233	RBM8A	92	90.625	Rhinopithecus_bieti
ENSPREG00000017572	rbm8a	94	86.093	ENSRROG00000033023	-	92	85.625	Rhinopithecus_roxellana
ENSPREG00000017572	rbm8a	94	91.391	ENSRROG00000040324	-	92	91.250	Rhinopithecus_roxellana
ENSPREG00000017572	rbm8a	94	91.391	ENSSBOG00000031316	RBM8A	92	91.250	Saimiri_boliviensis_boliviensis
ENSPREG00000017572	rbm8a	94	92.053	ENSSHAG00000018629	RBM8A	92	91.875	Sarcophilus_harrisii
ENSPREG00000017572	rbm8a	97	93.548	ENSSFOG00015009007	rbm8a	92	93.125	Scleropages_formosus
ENSPREG00000017572	rbm8a	97	91.613	ENSSFOG00015024171	rbm8a	92	90.625	Scleropages_formosus
ENSPREG00000017572	rbm8a	100	96.250	ENSSMAG00000012998	rbm8a	91	96.250	Scophthalmus_maximus
ENSPREG00000017572	rbm8a	100	96.250	ENSSDUG00000005911	rbm8a	91	96.250	Seriola_dumerili
ENSPREG00000017572	rbm8a	100	96.250	ENSSLDG00000011664	rbm8a	91	96.250	Seriola_lalandi_dorsalis
ENSPREG00000017572	rbm8a	94	91.391	ENSSARG00000013289	RBM8A	92	91.250	Sorex_araneus
ENSPREG00000017572	rbm8a	94	92.053	ENSSPUG00000001576	RBM8A	92	91.875	Sphenodon_punctatus
ENSPREG00000017572	rbm8a	100	96.250	ENSSPAG00000012181	rbm8a	91	96.250	Stegastes_partitus
ENSPREG00000017572	rbm8a	94	91.391	ENSSSCG00000028509	RBM8A	92	91.250	Sus_scrofa
ENSPREG00000017572	rbm8a	94	88.742	ENSTGUG00000004447	RBM8A	92	88.750	Taeniopygia_guttata
ENSPREG00000017572	rbm8a	100	95.000	ENSTRUG00000013173	rbm8a	91	95.000	Takifugu_rubripes
ENSPREG00000017572	rbm8a	99	94.304	ENSTNIG00000006869	rbm8a	91	94.375	Tetraodon_nigroviridis
ENSPREG00000017572	rbm8a	71	92.105	ENSTBEG00000014947	RBM8A	100	92.105	Tupaia_belangeri
ENSPREG00000017572	rbm8a	80	90.625	ENSTTRG00000009081	RBM8A	91	90.511	Tursiops_truncatus
ENSPREG00000017572	rbm8a	94	91.391	ENSUAMG00000021929	RBM8A	92	91.250	Ursus_americanus
ENSPREG00000017572	rbm8a	94	91.391	ENSUMAG00000010298	RBM8A	92	91.250	Ursus_maritimus
ENSPREG00000017572	rbm8a	94	91.391	ENSVVUG00000007486	RBM8A	92	91.250	Vulpes_vulpes
ENSPREG00000017572	rbm8a	100	100.000	ENSXCOG00000004369	rbm8a	91	100.000	Xiphophorus_couchianus
ENSPREG00000017572	rbm8a	100	100.000	ENSXMAG00000013463	rbm8a	100	98.750	Xiphophorus_maculatus