EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000017802 (Gene tree)
Gene ID: 103471362
Gene Symbol: clp1
Alias: fa28a12|wu:fa28a12
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 2510 bases
Position: chrLG10:23362890-23365399
Accession: 103471362
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000026331	Clp1	PF06807.14	2.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000026599	-	1328	XM_008420309	ENSPREP00000026331	441 (aa)	XP_008418531	UPI0004A503E8

Gene Model

Click here to download ENSPREG00000017802's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000017802's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000017802	clp1	99	75.172	ENSG00000172409	CLP1	99	75.638	Homo_sapiens
ENSPREG00000017802	clp1	100	94.558	ENSAPOG00000008242	clp1	100	94.558	Acanthochromis_polyacanthus
ENSPREG00000017802	clp1	99	74.943	ENSAMEG00000014551	CLP1	99	74.943	Ailuropoda_melanoleuca
ENSPREG00000017802	clp1	100	94.104	ENSACIG00000006310	clp1	99	94.104	Amphilophus_citrinellus
ENSPREG00000017802	clp1	100	94.785	ENSAOCG00000010681	clp1	100	94.785	Amphiprion_ocellaris
ENSPREG00000017802	clp1	100	94.785	ENSAPEG00000012165	clp1	100	94.785	Amphiprion_percula
ENSPREG00000017802	clp1	100	95.011	ENSATEG00000012374	clp1	100	95.011	Anabas_testudineus
ENSPREG00000017802	clp1	98	75.463	ENSACAG00000007139	CLP1	99	75.463	Anolis_carolinensis
ENSPREG00000017802	clp1	99	75.172	ENSANAG00000034935	CLP1	99	75.638	Aotus_nancymaae
ENSPREG00000017802	clp1	100	94.331	ENSACLG00000013573	clp1	100	94.331	Astatotilapia_calliptera
ENSPREG00000017802	clp1	95	87.500	ENSAMXG00000014194	clp1	98	87.500	Astyanax_mexicanus
ENSPREG00000017802	clp1	98	75.174	ENSBTAG00000006493	CLP1	99	75.174	Bos_taurus
ENSPREG00000017802	clp1	95	47.518	WBGene00010304	clpf-1	97	47.518	Caenorhabditis_elegans
ENSPREG00000017802	clp1	99	75.172	ENSCJAG00000008748	CLP1	99	75.638	Callithrix_jacchus
ENSPREG00000017802	clp1	98	75.174	ENSCAFG00000007815	CLP1	99	75.174	Canis_familiaris
ENSPREG00000017802	clp1	98	75.174	ENSCAFG00020000903	CLP1	99	75.174	Canis_lupus_dingo
ENSPREG00000017802	clp1	98	75.870	ENSCHIG00000023497	CLP1	99	75.870	Capra_hircus
ENSPREG00000017802	clp1	99	75.172	ENSTSYG00000006824	CLP1	99	75.172	Carlito_syrichta
ENSPREG00000017802	clp1	98	75.463	ENSCAPG00000009703	CLP1	99	75.463	Cavia_aperea
ENSPREG00000017802	clp1	96	76.179	ENSCPOG00000012554	CLP1	99	76.179	Cavia_porcellus
ENSPREG00000017802	clp1	98	75.174	ENSCCAG00000031957	CLP1	99	75.174	Cebus_capucinus
ENSPREG00000017802	clp1	100	74.150	ENSCATG00000044628	CLP1	99	75.638	Cercocebus_atys
ENSPREG00000017802	clp1	98	75.406	ENSCLAG00000004094	CLP1	99	75.406	Chinchilla_lanigera
ENSPREG00000017802	clp1	98	75.638	ENSCSAG00000005994	CLP1	99	75.638	Chlorocebus_sabaeus
ENSPREG00000017802	clp1	98	75.000	ENSCPBG00000016843	CLP1	99	75.000	Chrysemys_picta_bellii
ENSPREG00000017802	clp1	96	61.466	ENSCING00000003779	-	97	61.466	Ciona_intestinalis
ENSPREG00000017802	clp1	98	60.789	ENSCSAVG00000003437	-	99	60.789	Ciona_savignyi
ENSPREG00000017802	clp1	99	75.172	ENSCANG00000034335	CLP1	99	75.638	Colobus_angolensis_palliatus
ENSPREG00000017802	clp1	98	74.769	ENSCGRG00001002227	CLP1	99	74.769	Cricetulus_griseus_chok1gshd
ENSPREG00000017802	clp1	98	74.769	ENSCGRG00000004328	CLP1	99	74.769	Cricetulus_griseus_crigri
ENSPREG00000017802	clp1	100	90.703	ENSCSEG00000008614	clp1	100	90.703	Cynoglossus_semilaevis
ENSPREG00000017802	clp1	100	97.506	ENSCVAG00000020101	clp1	100	97.506	Cyprinodon_variegatus
ENSPREG00000017802	clp1	100	84.753	ENSDARG00000063663	clp1	100	84.753	Danio_rerio
ENSPREG00000017802	clp1	98	74.827	ENSDNOG00000042415	CLP1	90	74.827	Dasypus_novemcinctus
ENSPREG00000017802	clp1	98	74.942	ENSDORG00000014685	Clp1	99	74.942	Dipodomys_ordii
ENSPREG00000017802	clp1	95	53.828	FBgn0033842	cbc	97	53.828	Drosophila_melanogaster
ENSPREG00000017802	clp1	98	75.406	ENSETEG00000003009	CLP1	99	75.406	Echinops_telfairi
ENSPREG00000017802	clp1	98	64.733	ENSEBUG00000011648	clp1	99	64.733	Eptatretus_burgeri
ENSPREG00000017802	clp1	98	75.870	ENSEASG00005002093	CLP1	99	75.870	Equus_asinus_asinus
ENSPREG00000017802	clp1	99	75.632	ENSECAG00000011597	CLP1	99	75.870	Equus_caballus
ENSPREG00000017802	clp1	98	74.710	ENSEEUG00000012771	CLP1	99	74.710	Erinaceus_europaeus
ENSPREG00000017802	clp1	100	86.547	ENSELUG00000024048	clp1	100	86.547	Esox_lucius
ENSPREG00000017802	clp1	99	75.172	ENSFCAG00000006633	CLP1	99	75.406	Felis_catus
ENSPREG00000017802	clp1	98	75.463	ENSFALG00000011145	CLP1	99	75.463	Ficedula_albicollis
ENSPREG00000017802	clp1	98	75.406	ENSFDAG00000000234	CLP1	99	75.406	Fukomys_damarensis
ENSPREG00000017802	clp1	100	98.413	ENSFHEG00000014760	CLP1	100	98.413	Fundulus_heteroclitus
ENSPREG00000017802	clp1	100	88.209	ENSGMOG00000019340	clp1	100	88.209	Gadus_morhua
ENSPREG00000017802	clp1	98	75.694	ENSGALG00000007370	CLP1	99	75.694	Gallus_gallus
ENSPREG00000017802	clp1	100	99.093	ENSGAFG00000003020	clp1	100	99.093	Gambusia_affinis
ENSPREG00000017802	clp1	100	93.651	ENSGACG00000017832	clp1	100	93.651	Gasterosteus_aculeatus
ENSPREG00000017802	clp1	98	75.000	ENSGAGG00000013279	CLP1	99	75.000	Gopherus_agassizii
ENSPREG00000017802	clp1	99	75.172	ENSGGOG00000023006	CLP1	99	75.638	Gorilla_gorilla
ENSPREG00000017802	clp1	100	94.558	ENSHBUG00000010436	clp1	100	94.558	Haplochromis_burtoni
ENSPREG00000017802	clp1	98	75.406	ENSHGLG00000009914	CLP1	99	75.406	Heterocephalus_glaber_female
ENSPREG00000017802	clp1	98	75.406	ENSHGLG00100006105	CLP1	99	75.406	Heterocephalus_glaber_male
ENSPREG00000017802	clp1	100	93.878	ENSHCOG00000010072	clp1	100	93.878	Hippocampus_comes
ENSPREG00000017802	clp1	95	88.180	ENSIPUG00000016238	clp1	99	84.633	Ictalurus_punctatus
ENSPREG00000017802	clp1	98	75.406	ENSSTOG00000029257	CLP1	99	75.406	Ictidomys_tridecemlineatus
ENSPREG00000017802	clp1	98	74.942	ENSJJAG00000023691	Clp1	99	74.942	Jaculus_jaculus
ENSPREG00000017802	clp1	100	96.372	ENSKMAG00000011990	clp1	100	96.372	Kryptolebias_marmoratus
ENSPREG00000017802	clp1	100	94.558	ENSLBEG00000010201	clp1	100	94.558	Labrus_bergylta
ENSPREG00000017802	clp1	98	74.884	ENSLACG00000003160	CLP1	99	74.884	Latimeria_chalumnae
ENSPREG00000017802	clp1	71	86.335	ENSLOCG00000008074	clp1	100	86.335	Lepisosteus_oculatus
ENSPREG00000017802	clp1	98	75.174	ENSLAFG00000014907	CLP1	99	75.174	Loxodonta_africana
ENSPREG00000017802	clp1	99	75.172	ENSMFAG00000046074	CLP1	99	75.638	Macaca_fascicularis
ENSPREG00000017802	clp1	99	75.172	ENSMMUG00000038007	CLP1	99	75.172	Macaca_mulatta
ENSPREG00000017802	clp1	98	75.638	ENSMNEG00000000259	CLP1	99	75.638	Macaca_nemestrina
ENSPREG00000017802	clp1	99	75.172	ENSMLEG00000043556	CLP1	99	75.638	Mandrillus_leucophaeus
ENSPREG00000017802	clp1	100	95.918	ENSMAMG00000002149	clp1	100	95.918	Mastacembelus_armatus
ENSPREG00000017802	clp1	100	94.331	ENSMZEG00005002850	clp1	100	94.331	Maylandia_zebra
ENSPREG00000017802	clp1	98	75.694	ENSMGAG00000009643	CLP1	99	75.694	Meleagris_gallopavo
ENSPREG00000017802	clp1	98	74.306	ENSMAUG00000016261	Clp1	99	74.306	Mesocricetus_auratus
ENSPREG00000017802	clp1	99	74.943	ENSMICG00000004895	CLP1	99	75.174	Microcebus_murinus
ENSPREG00000017802	clp1	98	75.000	ENSMOCG00000005498	Clp1	99	75.000	Microtus_ochrogaster
ENSPREG00000017802	clp1	100	93.197	ENSMMOG00000003229	clp1	100	93.197	Mola_mola
ENSPREG00000017802	clp1	98	75.000	ENSMODG00000020107	-	99	75.000	Monodelphis_domestica
ENSPREG00000017802	clp1	98	75.000	ENSMODG00000024148	-	99	75.000	Monodelphis_domestica
ENSPREG00000017802	clp1	100	95.465	ENSMALG00000014239	clp1	100	95.465	Monopterus_albus
ENSPREG00000017802	clp1	98	74.769	MGP_CAROLIEiJ_G0023726	Clp1	99	74.769	Mus_caroli
ENSPREG00000017802	clp1	98	74.769	ENSMUSG00000027079	Clp1	99	74.769	Mus_musculus
ENSPREG00000017802	clp1	98	74.537	MGP_PahariEiJ_G0025177	Clp1	99	74.537	Mus_pahari
ENSPREG00000017802	clp1	98	74.769	MGP_SPRETEiJ_G0024646	Clp1	99	74.769	Mus_spretus
ENSPREG00000017802	clp1	98	75.174	ENSMPUG00000000268	CLP1	99	75.174	Mustela_putorius_furo
ENSPREG00000017802	clp1	98	75.406	ENSMLUG00000007904	CLP1	99	75.406	Myotis_lucifugus
ENSPREG00000017802	clp1	98	74.942	ENSNGAG00000006165	Clp1	99	74.942	Nannospalax_galili
ENSPREG00000017802	clp1	100	94.558	ENSNBRG00000005225	clp1	100	94.558	Neolamprologus_brichardi
ENSPREG00000017802	clp1	80	68.750	ENSNLEG00000012809	-	99	68.750	Nomascus_leucogenys
ENSPREG00000017802	clp1	98	74.885	ENSMEUG00000010949	CLP1	100	74.885	Notamacropus_eugenii
ENSPREG00000017802	clp1	69	76.898	ENSOPRG00000007329	CLP1	100	76.898	Ochotona_princeps
ENSPREG00000017802	clp1	98	75.406	ENSODEG00000011410	CLP1	99	75.406	Octodon_degus
ENSPREG00000017802	clp1	100	94.331	ENSONIG00000005089	clp1	100	94.331	Oreochromis_niloticus
ENSPREG00000017802	clp1	98	75.174	ENSOCUG00000007045	CLP1	99	75.174	Oryctolagus_cuniculus
ENSPREG00000017802	clp1	100	94.104	ENSORLG00000003647	clp1	100	94.104	Oryzias_latipes
ENSPREG00000017802	clp1	100	93.878	ENSORLG00020016676	clp1	100	93.878	Oryzias_latipes_hni
ENSPREG00000017802	clp1	100	94.104	ENSORLG00015019484	clp1	100	94.104	Oryzias_latipes_hsok
ENSPREG00000017802	clp1	100	94.104	ENSOMEG00000021303	clp1	100	94.104	Oryzias_melastigma
ENSPREG00000017802	clp1	98	75.406	ENSOGAG00000004508	CLP1	99	75.406	Otolemur_garnettii
ENSPREG00000017802	clp1	98	74.424	ENSOARG00000010145	CLP1	99	74.424	Ovis_aries
ENSPREG00000017802	clp1	99	75.172	ENSPPAG00000041519	CLP1	99	75.638	Pan_paniscus
ENSPREG00000017802	clp1	98	75.406	ENSPPRG00000006135	CLP1	99	75.406	Panthera_pardus
ENSPREG00000017802	clp1	98	75.406	ENSPTIG00000015866	CLP1	99	75.406	Panthera_tigris_altaica
ENSPREG00000017802	clp1	98	75.638	ENSPTRG00000047318	CLP1	99	75.638	Pan_troglodytes
ENSPREG00000017802	clp1	99	75.172	ENSPANG00000017078	CLP1	98	75.172	Papio_anubis
ENSPREG00000017802	clp1	100	84.944	ENSPKIG00000007697	clp1	100	85.618	Paramormyrops_kingsleyae
ENSPREG00000017802	clp1	93	72.616	ENSPSIG00000005468	CLP1	99	72.616	Pelodiscus_sinensis
ENSPREG00000017802	clp1	100	92.517	ENSPMGG00000012171	clp1	100	92.517	Periophthalmus_magnuspinnatus
ENSPREG00000017802	clp1	98	75.000	ENSPEMG00000011213	-	99	75.000	Peromyscus_maniculatus_bairdii
ENSPREG00000017802	clp1	95	68.171	ENSPMAG00000006707	clp1	97	68.171	Petromyzon_marinus
ENSPREG00000017802	clp1	98	75.463	ENSPCIG00000011899	CLP1	99	75.463	Phascolarctos_cinereus
ENSPREG00000017802	clp1	100	99.093	ENSPFOG00000008169	clp1	100	99.093	Poecilia_formosa
ENSPREG00000017802	clp1	100	99.093	ENSPLAG00000022388	clp1	100	99.093	Poecilia_latipinna
ENSPREG00000017802	clp1	100	99.093	ENSPMEG00000021088	clp1	100	99.093	Poecilia_mexicana
ENSPREG00000017802	clp1	52	73.362	ENSPPYG00000003266	-	100	73.362	Pongo_abelii
ENSPREG00000017802	clp1	99	74.943	ENSPCOG00000000360	CLP1	99	74.943	Propithecus_coquereli
ENSPREG00000017802	clp1	98	75.174	ENSPVAG00000016270	CLP1	99	75.174	Pteropus_vampyrus
ENSPREG00000017802	clp1	100	94.558	ENSPNYG00000017274	clp1	99	94.558	Pundamilia_nyererei
ENSPREG00000017802	clp1	100	85.045	ENSPNAG00000026460	clp1	100	85.491	Pygocentrus_nattereri
ENSPREG00000017802	clp1	98	74.769	ENSRNOG00000007416	Clp1	99	74.769	Rattus_norvegicus
ENSPREG00000017802	clp1	98	75.638	ENSRBIG00000018191	CLP1	99	75.638	Rhinopithecus_bieti
ENSPREG00000017802	clp1	99	75.172	ENSRROG00000039265	CLP1	99	75.638	Rhinopithecus_roxellana
ENSPREG00000017802	clp1	98	75.638	ENSSBOG00000032517	-	99	75.638	Saimiri_boliviensis_boliviensis
ENSPREG00000017802	clp1	94	63.527	ENSSBOG00000010558	-	93	63.527	Saimiri_boliviensis_boliviensis
ENSPREG00000017802	clp1	98	75.231	ENSSHAG00000015695	CLP1	99	75.231	Sarcophilus_harrisii
ENSPREG00000017802	clp1	100	83.444	ENSSFOG00015000628	clp1	100	83.444	Scleropages_formosus
ENSPREG00000017802	clp1	100	94.558	ENSSMAG00000019423	clp1	99	94.558	Scophthalmus_maximus
ENSPREG00000017802	clp1	100	94.785	ENSSDUG00000014495	clp1	100	94.785	Seriola_dumerili
ENSPREG00000017802	clp1	100	94.558	ENSSLDG00000000937	clp1	100	94.558	Seriola_lalandi_dorsalis
ENSPREG00000017802	clp1	52	73.246	ENSSARG00000002459	CLP1	100	73.246	Sorex_araneus
ENSPREG00000017802	clp1	98	74.769	ENSSPUG00000016811	CLP1	99	74.769	Sphenodon_punctatus
ENSPREG00000017802	clp1	100	94.558	ENSSPAG00000016052	clp1	100	94.558	Stegastes_partitus
ENSPREG00000017802	clp1	98	75.174	ENSSSCG00000031442	CLP1	99	75.174	Sus_scrofa
ENSPREG00000017802	clp1	98	75.231	ENSTGUG00000007002	CLP1	99	75.231	Taeniopygia_guttata
ENSPREG00000017802	clp1	100	90.476	ENSTRUG00000012602	clp1	100	90.476	Takifugu_rubripes
ENSPREG00000017802	clp1	100	90.476	ENSTNIG00000013125	clp1	100	90.476	Tetraodon_nigroviridis
ENSPREG00000017802	clp1	98	74.710	ENSTBEG00000009975	CLP1	99	74.710	Tupaia_belangeri
ENSPREG00000017802	clp1	98	75.174	ENSTTRG00000002096	CLP1	99	75.174	Tursiops_truncatus
ENSPREG00000017802	clp1	98	75.174	ENSUAMG00000011388	CLP1	99	75.174	Ursus_americanus
ENSPREG00000017802	clp1	98	75.174	ENSUMAG00000018317	CLP1	99	75.174	Ursus_maritimus
ENSPREG00000017802	clp1	100	74.150	ENSVVUG00000017138	CLP1	99	74.150	Vulpes_vulpes
ENSPREG00000017802	clp1	98	72.055	ENSXETG00000007088	clp1	97	72.286	Xenopus_tropicalis
ENSPREG00000017802	clp1	100	99.320	ENSXCOG00000002287	clp1	100	99.320	Xiphophorus_couchianus
ENSPREG00000017802	clp1	100	99.320	ENSXMAG00000009783	clp1	100	99.320	Xiphophorus_maculatus