EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000017808 (Gene tree)
Gene ID: 103479446
Gene Symbol: sf3a2
Alias: zgc:56097|zgc:77448
Full Name: splicing factor 3a subunit 2
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 9252 bases
Position: chrLG17:14737077-14746328
Accession: 103479446
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000026350	zf-met	PF12874.7	4.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000026619	-	5019	XM_008433863	ENSPREP00000026350	294 (aa)	XP_008432085	UPI0004A3E2DB

Gene Model

Click here to download ENSPREG00000017808's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000017808's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000017808	sf3a2	73	95.370	ENSG00000104897	SF3A2	100	96.296	Homo_sapiens
ENSPREG00000017808	sf3a2	83	94.239	ENSAPOG00000003916	sf3a2	82	94.239	Acanthochromis_polyacanthus
ENSPREG00000017808	sf3a2	81	96.234	ENSACIG00000018153	sf3a2	81	96.234	Amphilophus_citrinellus
ENSPREG00000017808	sf3a2	83	94.650	ENSAOCG00000015960	sf3a2	82	94.650	Amphiprion_ocellaris
ENSPREG00000017808	sf3a2	83	94.650	ENSAPEG00000012336	sf3a2	82	94.650	Amphiprion_percula
ENSPREG00000017808	sf3a2	83	94.650	ENSATEG00000015449	sf3a2	82	94.650	Anabas_testudineus
ENSPREG00000017808	sf3a2	63	95.135	ENSANAG00000034031	-	89	95.135	Aotus_nancymaae
ENSPREG00000017808	sf3a2	88	92.664	ENSACLG00000002356	sf3a2	81	94.979	Astatotilapia_calliptera
ENSPREG00000017808	sf3a2	83	93.416	ENSAMXG00000032428	sf3a2	80	93.416	Astyanax_mexicanus
ENSPREG00000017808	sf3a2	75	79.638	WBGene00008683	repo-1	99	79.545	Caenorhabditis_elegans
ENSPREG00000017808	sf3a2	62	96.154	ENSCAPG00000003402	-	90	96.154	Cavia_aperea
ENSPREG00000017808	sf3a2	73	95.370	ENSCCAG00000009812	SF3A2	87	95.676	Cebus_capucinus
ENSPREG00000017808	sf3a2	73	95.370	ENSCPBG00000018569	SF3A2	69	94.931	Chrysemys_picta_bellii
ENSPREG00000017808	sf3a2	84	78.543	ENSCING00000003319	zf(matrin)-2	80	68.214	Ciona_intestinalis
ENSPREG00000017808	sf3a2	73	86.047	ENSCSAVG00000007862	-	57	86.047	Ciona_savignyi
ENSPREG00000017808	sf3a2	73	95.370	ENSCGRG00000011089	Sf3a2	94	96.154	Cricetulus_griseus_crigri
ENSPREG00000017808	sf3a2	89	90.076	ENSCSEG00000014308	sf3a2	85	92.562	Cynoglossus_semilaevis
ENSPREG00000017808	sf3a2	88	93.436	ENSCVAG00000021349	sf3a2	83	95.885	Cyprinodon_variegatus
ENSPREG00000017808	sf3a2	90	87.170	ENSDARG00000021107	sf3a2	78	97.248	Danio_rerio
ENSPREG00000017808	sf3a2	74	83.105	FBgn0036314	Sf3a2	83	83.105	Drosophila_melanogaster
ENSPREG00000017808	sf3a2	82	93.361	ENSELUG00000008471	sf3a2	79	93.004	Esox_lucius
ENSPREG00000017808	sf3a2	73	94.907	ENSFCAG00000030476	SF3A2	50	93.607	Felis_catus
ENSPREG00000017808	sf3a2	64	96.257	ENSFALG00000013785	-	50	94.737	Ficedula_albicollis
ENSPREG00000017808	sf3a2	62	96.154	ENSFDAG00000020911	-	93	96.154	Fukomys_damarensis
ENSPREG00000017808	sf3a2	88	96.911	ENSFHEG00000002392	sf3a2	82	97.531	Fundulus_heteroclitus
ENSPREG00000017808	sf3a2	82	94.606	ENSGMOG00000012186	sf3a2	81	94.239	Gadus_morhua
ENSPREG00000017808	sf3a2	73	96.296	ENSGALG00000021679	SF3A2	69	95.853	Gallus_gallus
ENSPREG00000017808	sf3a2	100	97.619	ENSGAFG00000008478	sf3a2	99	97.619	Gambusia_affinis
ENSPREG00000017808	sf3a2	85	93.173	ENSGACG00000015255	sf3a2	83	94.650	Gasterosteus_aculeatus
ENSPREG00000017808	sf3a2	58	95.294	ENSGAGG00000008500	SF3A2	64	93.642	Gopherus_agassizii
ENSPREG00000017808	sf3a2	88	92.664	ENSHBUG00000021796	sf3a2	81	94.979	Haplochromis_burtoni
ENSPREG00000017808	sf3a2	73	95.370	ENSHGLG00000015102	SF3A2	88	96.175	Heterocephalus_glaber_female
ENSPREG00000017808	sf3a2	73	95.370	ENSHGLG00100000418	SF3A2	88	96.175	Heterocephalus_glaber_male
ENSPREG00000017808	sf3a2	91	89.591	ENSHCOG00000001223	sf3a2	83	94.167	Hippocampus_comes
ENSPREG00000017808	sf3a2	83	91.770	ENSIPUG00000019071	sf3a2	81	91.770	Ictalurus_punctatus
ENSPREG00000017808	sf3a2	73	95.370	ENSSTOG00000007495	SF3A2	90	88.525	Ictidomys_tridecemlineatus
ENSPREG00000017808	sf3a2	73	95.370	ENSJJAG00000010635	Sf3a2	94	96.154	Jaculus_jaculus
ENSPREG00000017808	sf3a2	85	94.779	ENSKMAG00000006295	sf3a2	81	96.680	Kryptolebias_marmoratus
ENSPREG00000017808	sf3a2	88	94.208	ENSLBEG00000000677	sf3a2	82	94.650	Labrus_bergylta
ENSPREG00000017808	sf3a2	73	95.833	ENSLACG00000008744	SF3A2	69	95.392	Latimeria_chalumnae
ENSPREG00000017808	sf3a2	79	93.939	ENSLOCG00000005835	sf3a2	77	93.305	Lepisosteus_oculatus
ENSPREG00000017808	sf3a2	83	93.827	ENSMAMG00000009881	sf3a2	82	93.827	Mastacembelus_armatus
ENSPREG00000017808	sf3a2	88	92.664	ENSMZEG00005025609	sf3a2	81	94.979	Maylandia_zebra
ENSPREG00000017808	sf3a2	73	96.296	ENSMGAG00000001950	SF3A2	69	95.853	Meleagris_gallopavo
ENSPREG00000017808	sf3a2	62	96.154	ENSMAUG00000005644	-	94	96.154	Mesocricetus_auratus
ENSPREG00000017808	sf3a2	94	84.116	ENSMMOG00000010657	sf3a2	87	85.185	Mola_mola
ENSPREG00000017808	sf3a2	83	95.473	ENSMALG00000020442	sf3a2	82	95.473	Monopterus_albus
ENSPREG00000017808	sf3a2	73	95.370	MGP_CAROLIEiJ_G0015602	-	94	96.154	Mus_caroli
ENSPREG00000017808	sf3a2	73	95.370	ENSMUSG00000020211	Sf3a2	94	96.154	Mus_musculus
ENSPREG00000017808	sf3a2	73	95.370	MGP_PahariEiJ_G0031015	-	94	96.154	Mus_pahari
ENSPREG00000017808	sf3a2	73	95.370	MGP_SPRETEiJ_G0016420	-	94	96.154	Mus_spretus
ENSPREG00000017808	sf3a2	73	94.907	ENSMLUG00000004426	-	50	93.607	Myotis_lucifugus
ENSPREG00000017808	sf3a2	62	95.604	ENSNGAG00000023309	-	94	95.604	Nannospalax_galili
ENSPREG00000017808	sf3a2	81	94.979	ENSNBRG00000019872	sf3a2	81	94.979	Neolamprologus_brichardi
ENSPREG00000017808	sf3a2	64	94.118	ENSODEG00000013722	-	100	94.118	Octodon_degus
ENSPREG00000017808	sf3a2	81	95.397	ENSONIG00000010198	sf3a2	81	95.397	Oreochromis_niloticus
ENSPREG00000017808	sf3a2	70	94.146	ENSOANG00000013649	-	98	93.689	Ornithorhynchus_anatinus
ENSPREG00000017808	sf3a2	91	93.284	ENSORLG00000015301	sf3a2	76	98.182	Oryzias_latipes
ENSPREG00000017808	sf3a2	91	93.284	ENSORLG00020017235	sf3a2	76	98.182	Oryzias_latipes_hni
ENSPREG00000017808	sf3a2	91	93.657	ENSORLG00015017116	sf3a2	76	98.182	Oryzias_latipes_hsok
ENSPREG00000017808	sf3a2	82	96.250	ENSOMEG00000020860	sf3a2	76	98.182	Oryzias_melastigma
ENSPREG00000017808	sf3a2	73	95.370	ENSOARG00000014357	SF3A2	54	94.064	Ovis_aries
ENSPREG00000017808	sf3a2	83	93.827	ENSPKIG00000009487	sf3a2	77	93.827	Paramormyrops_kingsleyae
ENSPREG00000017808	sf3a2	73	94.495	ENSPSIG00000010839	SF3A2	69	94.064	Pelodiscus_sinensis
ENSPREG00000017808	sf3a2	73	98.611	ENSPMGG00000017249	sf3a2	80	98.058	Periophthalmus_magnuspinnatus
ENSPREG00000017808	sf3a2	100	98.980	ENSPFOG00000015945	sf3a2	100	98.980	Poecilia_formosa
ENSPREG00000017808	sf3a2	100	99.320	ENSPLAG00000010052	sf3a2	100	99.320	Poecilia_latipinna
ENSPREG00000017808	sf3a2	100	98.980	ENSPMEG00000000184	sf3a2	100	98.980	Poecilia_mexicana
ENSPREG00000017808	sf3a2	88	92.664	ENSPNYG00000006928	sf3a2	81	94.979	Pundamilia_nyererei
ENSPREG00000017808	sf3a2	83	93.416	ENSPNAG00000027582	sf3a2	80	93.416	Pygocentrus_nattereri
ENSPREG00000017808	sf3a2	73	94.444	ENSSHAG00000011677	-	87	94.444	Sarcophilus_harrisii
ENSPREG00000017808	sf3a2	65	84.896	ENSSHAG00000011646	-	68	84.456	Sarcophilus_harrisii
ENSPREG00000017808	sf3a2	87	91.085	ENSSFOG00015010920	sf3a2	69	93.827	Scleropages_formosus
ENSPREG00000017808	sf3a2	81	95.397	ENSSMAG00000002629	sf3a2	83	95.397	Scophthalmus_maximus
ENSPREG00000017808	sf3a2	85	93.976	ENSSDUG00000015810	sf3a2	83	95.473	Seriola_dumerili
ENSPREG00000017808	sf3a2	85	93.976	ENSSLDG00000010874	sf3a2	83	95.473	Seriola_lalandi_dorsalis
ENSPREG00000017808	sf3a2	83	94.239	ENSSPAG00000004960	sf3a2	82	94.239	Stegastes_partitus
ENSPREG00000017808	sf3a2	70	96.098	ENSTGUG00000000305	SF3A2	100	96.098	Taeniopygia_guttata
ENSPREG00000017808	sf3a2	81	94.561	ENSTRUG00000009045	sf3a2	75	97.248	Takifugu_rubripes
ENSPREG00000017808	sf3a2	91	91.450	ENSTNIG00000015318	sf3a2	75	96.789	Tetraodon_nigroviridis
ENSPREG00000017808	sf3a2	83	89.344	ENSXETG00000024943	sf3a2	53	95.392	Xenopus_tropicalis
ENSPREG00000017808	sf3a2	100	97.619	ENSXCOG00000008222	sf3a2	99	97.619	Xiphophorus_couchianus
ENSPREG00000017808	sf3a2	100	97.619	ENSXMAG00000029068	sf3a2	99	97.619	Xiphophorus_maculatus