EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000017885 (Gene tree)
Gene ID: -
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 14976 bases
Position: chrLG4:18046691-18061666
Accession: 103463891
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000026478	ResIII	PF04851.15	7.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000026747	-	2604	XM_008407591	ENSPREP00000026478	867 (aa)	XP_008405813	-

Gene Model

Click here to download ENSPREG00000017885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000017885's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000017885	chd1l	55	42.278	ENSPREG00000022653	chd6	77	41.686
ENSPREG00000017885	chd1l	51	31.089	ENSPREG00000018443	rad54b	58	31.089
ENSPREG00000017885	chd1l	51	30.862	ENSPREG00000019955	rad54l	68	30.862
ENSPREG00000017885	chd1l	50	36.310	ENSPREG00000018185	smarcad1a	51	36.310
ENSPREG00000017885	chd1l	53	45.413	ENSPREG00000020337	hells	68	37.143
ENSPREG00000017885	chd1l	61	41.273	ENSPREG00000023250	smarca5	52	41.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000017885	chd1l	96	63.054	ENSG00000131778	CHD1L	97	65.074	Homo_sapiens
ENSPREG00000017885	chd1l	98	81.954	ENSAPOG00000001539	chd1l	99	82.414	Acanthochromis_polyacanthus
ENSPREG00000017885	chd1l	98	62.344	ENSAMEG00000017063	CHD1L	97	62.258	Ailuropoda_melanoleuca
ENSPREG00000017885	chd1l	98	80.023	ENSACIG00000001164	chd1l	99	80.251	Amphilophus_citrinellus
ENSPREG00000017885	chd1l	98	82.204	ENSAOCG00000014510	chd1l	85	82.204	Amphiprion_ocellaris
ENSPREG00000017885	chd1l	98	79.080	ENSAPEG00000017450	chd1l	95	79.310	Amphiprion_percula
ENSPREG00000017885	chd1l	98	79.104	ENSAPEG00000017573	chd1l	95	79.334	Amphiprion_percula
ENSPREG00000017885	chd1l	98	81.034	ENSATEG00000013058	chd1l	95	79.171	Anabas_testudineus
ENSPREG00000017885	chd1l	95	61.484	ENSAPLG00000009976	CHD1L	93	61.837	Anas_platyrhynchos
ENSPREG00000017885	chd1l	98	59.420	ENSACAG00000017686	CHD1L	98	59.309	Anolis_carolinensis
ENSPREG00000017885	chd1l	97	62.818	ENSANAG00000024347	CHD1L	95	62.140	Aotus_nancymaae
ENSPREG00000017885	chd1l	98	80.206	ENSACLG00000019304	chd1l	97	79.863	Astatotilapia_calliptera
ENSPREG00000017885	chd1l	98	64.277	ENSAMXG00000012367	chd1l	86	64.162	Astyanax_mexicanus
ENSPREG00000017885	chd1l	97	62.384	ENSBTAG00000020831	CHD1L	95	62.731	Bos_taurus
ENSPREG00000017885	chd1l	98	61.856	ENSCJAG00000002406	CHD1L	96	62.113	Callithrix_jacchus
ENSPREG00000017885	chd1l	97	60.694	ENSCAFG00000010944	CHD1L	95	60.834	Canis_familiaris
ENSPREG00000017885	chd1l	99	61.937	ENSCAFG00020020121	CHD1L	98	61.964	Canis_lupus_dingo
ENSPREG00000017885	chd1l	97	61.921	ENSCHIG00000013871	CHD1L	95	62.500	Capra_hircus
ENSPREG00000017885	chd1l	94	63.152	ENSTSYG00000003005	CHD1L	98	62.945	Carlito_syrichta
ENSPREG00000017885	chd1l	97	61.182	ENSCPOG00000009000	CHD1L	96	61.645	Cavia_porcellus
ENSPREG00000017885	chd1l	98	60.252	ENSCCAG00000036079	CHD1L	96	59.931	Cebus_capucinus
ENSPREG00000017885	chd1l	97	62.775	ENSCATG00000031044	CHD1L	95	62.688	Cercocebus_atys
ENSPREG00000017885	chd1l	98	62.014	ENSCLAG00000000880	CHD1L	97	62.471	Chinchilla_lanigera
ENSPREG00000017885	chd1l	97	62.933	ENSCSAG00000018386	CHD1L	95	62.731	Chlorocebus_sabaeus
ENSPREG00000017885	chd1l	98	63.512	ENSCPBG00000002600	CHD1L	98	63.512	Chrysemys_picta_bellii
ENSPREG00000017885	chd1l	97	62.775	ENSCANG00000020239	CHD1L	95	62.688	Colobus_angolensis_palliatus
ENSPREG00000017885	chd1l	97	62.890	ENSCGRG00001021624	Chd1l	96	63.121	Cricetulus_griseus_chok1gshd
ENSPREG00000017885	chd1l	94	63.377	ENSCGRG00000007554	Chd1l	98	63.615	Cricetulus_griseus_crigri
ENSPREG00000017885	chd1l	98	84.289	ENSCVAG00000002595	chd1l	91	84.120	Cyprinodon_variegatus
ENSPREG00000017885	chd1l	98	70.953	ENSDARG00000015471	chd1l	86	70.112	Danio_rerio
ENSPREG00000017885	chd1l	97	62.731	ENSDNOG00000019504	CHD1L	95	63.395	Dasypus_novemcinctus
ENSPREG00000017885	chd1l	97	62.688	ENSDORG00000013555	Chd1l	95	63.152	Dipodomys_ordii
ENSPREG00000017885	chd1l	89	62.342	ENSETEG00000008445	CHD1L	86	62.342	Echinops_telfairi
ENSPREG00000017885	chd1l	65	76.087	ENSEBUG00000005791	chd1l	74	76.087	Eptatretus_burgeri
ENSPREG00000017885	chd1l	99	62.030	ENSEASG00005007364	CHD1L	99	62.923	Equus_asinus_asinus
ENSPREG00000017885	chd1l	97	62.500	ENSECAG00000008915	CHD1L	99	62.923	Equus_caballus
ENSPREG00000017885	chd1l	98	61.998	ENSELUG00000016844	chd1l	84	62.240	Esox_lucius
ENSPREG00000017885	chd1l	98	61.839	ENSFCAG00000007777	CHD1L	95	62.384	Felis_catus
ENSPREG00000017885	chd1l	96	61.358	ENSFALG00000006087	CHD1L	94	61.710	Ficedula_albicollis
ENSPREG00000017885	chd1l	95	63.905	ENSFDAG00000012431	CHD1L	98	64.024	Fukomys_damarensis
ENSPREG00000017885	chd1l	98	85.517	ENSFHEG00000012420	chd1l	86	85.402	Fundulus_heteroclitus
ENSPREG00000017885	chd1l	96	61.844	ENSGALG00000015038	CHD1L	95	61.772	Gallus_gallus
ENSPREG00000017885	chd1l	98	92.078	ENSGAFG00000018198	chd1l	99	86.567	Gambusia_affinis
ENSPREG00000017885	chd1l	58	82.192	ENSGACG00000014042	chd1l	97	82.283	Gasterosteus_aculeatus
ENSPREG00000017885	chd1l	98	63.116	ENSGAGG00000014432	CHD1L	99	63.116	Gopherus_agassizii
ENSPREG00000017885	chd1l	96	62.837	ENSGGOG00000001067	CHD1L	95	62.471	Gorilla_gorilla
ENSPREG00000017885	chd1l	98	80.320	ENSHBUG00000007464	chd1l	98	80.320	Haplochromis_burtoni
ENSPREG00000017885	chd1l	97	61.574	ENSHGLG00000008933	CHD1L	96	62.153	Heterocephalus_glaber_female
ENSPREG00000017885	chd1l	94	61.950	ENSHGLG00100007155	CHD1L	98	62.426	Heterocephalus_glaber_male
ENSPREG00000017885	chd1l	98	73.249	ENSHCOG00000012787	chd1l	94	73.479	Hippocampus_comes
ENSPREG00000017885	chd1l	98	67.471	ENSIPUG00000022617	chd1l	85	67.583	Ictalurus_punctatus
ENSPREG00000017885	chd1l	97	59.390	ENSSTOG00000007032	CHD1L	95	59.390	Ictidomys_tridecemlineatus
ENSPREG00000017885	chd1l	98	79.104	ENSKMAG00000014358	chd1l	85	79.291	Kryptolebias_marmoratus
ENSPREG00000017885	chd1l	98	79.310	ENSLBEG00000023845	chd1l	96	81.127	Labrus_bergylta
ENSPREG00000017885	chd1l	97	59.205	ENSLACG00000006262	CHD1L	86	58.718	Latimeria_chalumnae
ENSPREG00000017885	chd1l	98	69.381	ENSLOCG00000010574	chd1l	86	69.725	Lepisosteus_oculatus
ENSPREG00000017885	chd1l	95	62.898	ENSLAFG00000018136	CHD1L	98	63.251	Loxodonta_africana
ENSPREG00000017885	chd1l	95	63.679	ENSMFAG00000043562	CHD1L	97	63.313	Macaca_fascicularis
ENSPREG00000017885	chd1l	97	62.890	ENSMMUG00000009024	CHD1L	95	62.804	Macaca_mulatta
ENSPREG00000017885	chd1l	97	62.890	ENSMNEG00000039905	CHD1L	95	62.804	Macaca_nemestrina
ENSPREG00000017885	chd1l	97	62.890	ENSMLEG00000030900	CHD1L	95	62.804	Mandrillus_leucophaeus
ENSPREG00000017885	chd1l	98	80.460	ENSMAMG00000012822	chd1l	99	78.555	Mastacembelus_armatus
ENSPREG00000017885	chd1l	98	80.320	ENSMZEG00005020830	chd1l	87	80.549	Maylandia_zebra
ENSPREG00000017885	chd1l	95	62.057	ENSMGAG00000014304	CHD1L	98	62.057	Meleagris_gallopavo
ENSPREG00000017885	chd1l	97	62.327	ENSMICG00000002497	CHD1L	95	62.788	Microcebus_murinus
ENSPREG00000017885	chd1l	97	63.006	ENSMOCG00000006305	Chd1l	96	63.121	Microtus_ochrogaster
ENSPREG00000017885	chd1l	98	74.392	ENSMMOG00000005964	chd1l	91	74.623	Mola_mola
ENSPREG00000017885	chd1l	98	60.909	ENSMODG00000018717	CHD1L	97	61.250	Monodelphis_domestica
ENSPREG00000017885	chd1l	98	81.034	ENSMALG00000014675	chd1l	85	81.379	Monopterus_albus
ENSPREG00000017885	chd1l	97	63.291	MGP_CAROLIEiJ_G0025401	Chd1l	96	63.406	Mus_caroli
ENSPREG00000017885	chd1l	97	63.176	ENSMUSG00000028089	Chd1l	96	63.206	Mus_musculus
ENSPREG00000017885	chd1l	97	63.437	MGP_PahariEiJ_G0026845	Chd1l	96	63.437	Mus_pahari
ENSPREG00000017885	chd1l	97	63.249	MGP_SPRETEiJ_G0026347	Chd1l	96	63.364	Mus_spretus
ENSPREG00000017885	chd1l	98	61.574	ENSMPUG00000000615	CHD1L	97	61.916	Mustela_putorius_furo
ENSPREG00000017885	chd1l	96	62.197	ENSMLUG00000007573	CHD1L	95	61.899	Myotis_lucifugus
ENSPREG00000017885	chd1l	95	59.740	ENSNGAG00000000908	Chd1l	96	60.213	Nannospalax_galili
ENSPREG00000017885	chd1l	98	78.085	ENSNBRG00000006021	chd1l	95	78.416	Neolamprologus_brichardi
ENSPREG00000017885	chd1l	97	61.894	ENSNLEG00000000179	CHD1L	95	61.690	Nomascus_leucogenys
ENSPREG00000017885	chd1l	95	53.618	ENSOPRG00000006973	CHD1L	89	63.780	Ochotona_princeps
ENSPREG00000017885	chd1l	97	59.535	ENSODEG00000002494	CHD1L	95	59.767	Octodon_degus
ENSPREG00000017885	chd1l	98	80.805	ENSONIG00000003183	chd1l	88	81.007	Oreochromis_niloticus
ENSPREG00000017885	chd1l	87	59.949	ENSOANG00000003068	CHD1L	93	60.205	Ornithorhynchus_anatinus
ENSPREG00000017885	chd1l	97	59.611	ENSOCUG00000009336	CHD1L	95	59.611	Oryctolagus_cuniculus
ENSPREG00000017885	chd1l	98	78.190	ENSORLG00000003673	chd1l	95	78.886	Oryzias_latipes
ENSPREG00000017885	chd1l	98	78.060	ENSORLG00020005123	chd1l	99	77.681	Oryzias_latipes_hni
ENSPREG00000017885	chd1l	98	78.422	ENSORLG00015001680	chd1l	98	79.118	Oryzias_latipes_hsok
ENSPREG00000017885	chd1l	75	79.383	ENSOMEG00000006109	chd1l	78	80.154	Oryzias_melastigma
ENSPREG00000017885	chd1l	97	61.921	ENSOGAG00000008775	CHD1L	95	62.269	Otolemur_garnettii
ENSPREG00000017885	chd1l	98	61.688	ENSOARG00000020547	CHD1L	97	63.314	Ovis_aries
ENSPREG00000017885	chd1l	96	63.337	ENSPPAG00000039193	CHD1L	98	63.067	Pan_paniscus
ENSPREG00000017885	chd1l	96	62.544	ENSPPRG00000010258	CHD1L	95	62.500	Panthera_pardus
ENSPREG00000017885	chd1l	96	63.220	ENSPTRG00000001220	CHD1L	94	62.660	Pan_troglodytes
ENSPREG00000017885	chd1l	96	63.380	ENSPANG00000009170	CHD1L	95	62.616	Papio_anubis
ENSPREG00000017885	chd1l	98	69.920	ENSPKIG00000022166	chd1l	97	69.065	Paramormyrops_kingsleyae
ENSPREG00000017885	chd1l	96	63.753	ENSPSIG00000012595	CHD1L	94	63.753	Pelodiscus_sinensis
ENSPREG00000017885	chd1l	98	62.900	ENSPEMG00000013528	Chd1l	97	62.857	Peromyscus_maniculatus_bairdii
ENSPREG00000017885	chd1l	91	61.227	ENSPCIG00000030409	CHD1L	97	62.086	Phascolarctos_cinereus
ENSPREG00000017885	chd1l	98	92.775	ENSPFOG00000015948	chd1l	85	92.775	Poecilia_formosa
ENSPREG00000017885	chd1l	98	94.259	ENSPLAG00000015145	chd1l	97	93.908	Poecilia_latipinna
ENSPREG00000017885	chd1l	98	93.218	ENSPMEG00000008720	chd1l	90	93.103	Poecilia_mexicana
ENSPREG00000017885	chd1l	98	62.171	ENSPPYG00000000946	CHD1L	96	61.856	Pongo_abelii
ENSPREG00000017885	chd1l	92	56.304	ENSPCAG00000005959	CHD1L	90	57.509	Procavia_capensis
ENSPREG00000017885	chd1l	95	59.005	ENSPVAG00000006084	CHD1L	99	59.123	Pteropus_vampyrus
ENSPREG00000017885	chd1l	98	80.320	ENSPNYG00000013001	chd1l	97	80.435	Pundamilia_nyererei
ENSPREG00000017885	chd1l	98	70.595	ENSPNAG00000011881	chd1l	84	70.595	Pygocentrus_nattereri
ENSPREG00000017885	chd1l	97	62.587	ENSRNOG00000017669	Chd1l	96	63.279	Rattus_norvegicus
ENSPREG00000017885	chd1l	97	62.775	ENSRBIG00000041272	CHD1L	95	62.688	Rhinopithecus_bieti
ENSPREG00000017885	chd1l	97	63.066	ENSRROG00000041354	CHD1L	96	62.980	Rhinopithecus_roxellana
ENSPREG00000017885	chd1l	98	59.407	ENSSHAG00000017395	CHD1L	97	59.977	Sarcophilus_harrisii
ENSPREG00000017885	chd1l	98	70.434	ENSSFOG00015003649	chd1l	98	69.444	Scleropages_formosus
ENSPREG00000017885	chd1l	98	77.474	ENSSMAG00000019377	chd1l	97	75.941	Scophthalmus_maximus
ENSPREG00000017885	chd1l	96	81.883	ENSSDUG00000019831	chd1l	95	81.883	Seriola_dumerili
ENSPREG00000017885	chd1l	96	80.992	ENSSLDG00000012714	chd1l	95	81.250	Seriola_lalandi_dorsalis
ENSPREG00000017885	chd1l	96	60.885	ENSSPUG00000016865	CHD1L	96	61.350	Sphenodon_punctatus
ENSPREG00000017885	chd1l	98	81.995	ENSSPAG00000017653	chd1l	91	82.110	Stegastes_partitus
ENSPREG00000017885	chd1l	97	60.532	ENSSSCG00000006701	CHD1L	96	60.995	Sus_scrofa
ENSPREG00000017885	chd1l	96	61.502	ENSTGUG00000013392	-	97	61.972	Taeniopygia_guttata
ENSPREG00000017885	chd1l	96	66.863	ENSTNIG00000004902	chd1l	99	67.333	Tetraodon_nigroviridis
ENSPREG00000017885	chd1l	95	60.782	ENSTTRG00000011711	CHD1L	98	60.900	Tursiops_truncatus
ENSPREG00000017885	chd1l	98	62.002	ENSUAMG00000021991	CHD1L	96	63.507	Ursus_americanus
ENSPREG00000017885	chd1l	98	61.889	ENSUMAG00000009733	CHD1L	96	63.452	Ursus_maritimus
ENSPREG00000017885	chd1l	98	61.889	ENSVVUG00000007316	CHD1L	92	62.030	Vulpes_vulpes
ENSPREG00000017885	chd1l	98	88.927	ENSXCOG00000008336	chd1l	85	88.812	Xiphophorus_couchianus
ENSPREG00000017885	chd1l	98	92.069	ENSXMAG00000015898	chd1l	96	87.723	Xiphophorus_maculatus