EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000017911 (Gene tree)
Gene ID: 103479919
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 10452 bases
Position: chrLG17:27195408-27205859
Accession: 103479919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000026551	KH_1	PF00013.29	4.2e-68	1	4
ENSPREP00000026551	KH_1	PF00013.29	4.2e-68	2	4
ENSPREP00000026551	KH_1	PF00013.29	4.2e-68	3	4
ENSPREP00000026551	KH_1	PF00013.29	4.2e-68	4	4
ENSPREP00000026501	KH_1	PF00013.29	5.1e-68	1	4
ENSPREP00000026501	KH_1	PF00013.29	5.1e-68	2	4
ENSPREP00000026501	KH_1	PF00013.29	5.1e-68	3	4
ENSPREP00000026501	KH_1	PF00013.29	5.1e-68	4	4
ENSPREP00000026516	KH_1	PF00013.29	5.2e-68	1	4
ENSPREP00000026516	KH_1	PF00013.29	5.2e-68	2	4
ENSPREP00000026516	KH_1	PF00013.29	5.2e-68	3	4
ENSPREP00000026516	KH_1	PF00013.29	5.2e-68	4	4
ENSPREP00000026576	KH_1	PF00013.29	8.9e-63	1	4
ENSPREP00000026576	KH_1	PF00013.29	8.9e-63	2	4
ENSPREP00000026576	KH_1	PF00013.29	8.9e-63	3	4
ENSPREP00000026576	KH_1	PF00013.29	8.9e-63	4	4
ENSPREP00000026551	KH_2	PF07650.17	1.5e-20	1	1
ENSPREP00000026501	KH_2	PF07650.17	1.8e-20	1	1
ENSPREP00000026516	KH_2	PF07650.17	1.8e-20	1	1
ENSPREP00000026576	KH_2	PF07650.17	2.7e-19	1	1
ENSPREP00000026501	DUF1897	PF09005.10	2.9e-16	1	2
ENSPREP00000026501	DUF1897	PF09005.10	2.9e-16	2	2
ENSPREP00000026516	DUF1897	PF09005.10	2.9e-16	1	2
ENSPREP00000026516	DUF1897	PF09005.10	2.9e-16	2	2
ENSPREP00000026576	DUF1897	PF09005.10	5.8e-12	1	2
ENSPREP00000026576	DUF1897	PF09005.10	5.8e-12	2	2
ENSPREP00000026551	DUF1897	PF09005.10	4.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000026786	-	1971	XM_008434625	ENSPREP00000026516	656 (aa)	XP_008432847	UPI0004A29067
ENSPRET00000026823	-	1896	XM_008434628	ENSPREP00000026551	631 (aa)	XP_008432850	UPI0004A4ABF2
ENSPRET00000026771	-	1965	XM_008434626	ENSPREP00000026501	654 (aa)	XP_008432848	-
ENSPRET00000026851	-	1620	-	ENSPREP00000026576	539 (aa)	-	-

Gene Model

Click here to download ENSPREG00000017911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000017911's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000017911	fubp1	66	48.333	ENSPREG00000007742	PCBP2	67	41.667
ENSPREG00000017911	fubp1	97	50.190	ENSPREG00000015101	FUBP3	94	49.228
ENSPREG00000017911	fubp1	83	51.880	ENSPREG00000003168	-	92	53.033
ENSPREG00000017911	fubp1	62	31.507	ENSPREG00000001808	igf2bp3	66	31.892
ENSPREG00000017911	fubp1	96	56.250	ENSPREG00000000419	khsrp	97	52.388
ENSPREG00000017911	fubp1	64	41.250	ENSPREG00000006202	pcbp2	97	41.250
ENSPREG00000017911	fubp1	55	43.056	ENSPREG00000017370	-	66	43.056
ENSPREG00000017911	fubp1	51	37.500	ENSPREG00000020585	-	68	37.333
ENSPREG00000017911	fubp1	57	33.577	ENSPREG00000007009	igf2bp1	61	30.120

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000017911	fubp1	70	78.587	ENSG00000162613	FUBP1	99	71.298	Homo_sapiens
ENSPREG00000017911	fubp1	99	92.910	ENSAPOG00000014845	fubp1	98	88.006	Acanthochromis_polyacanthus
ENSPREG00000017911	fubp1	63	84.457	ENSAMEG00000007372	FUBP1	99	69.027	Ailuropoda_melanoleuca
ENSPREG00000017911	fubp1	99	92.683	ENSACIG00000020024	fubp1	99	86.772	Amphilophus_citrinellus
ENSPREG00000017911	fubp1	99	90.650	ENSAPEG00000012232	fubp1	99	89.291	Amphiprion_percula
ENSPREG00000017911	fubp1	100	95.719	ENSATEG00000018619	fubp1	100	95.719	Anabas_testudineus
ENSPREG00000017911	fubp1	63	84.751	ENSAPLG00000005965	FUBP1	100	72.787	Anas_platyrhynchos
ENSPREG00000017911	fubp1	63	84.457	ENSACAG00000006310	FUBP1	96	68.940	Anolis_carolinensis
ENSPREG00000017911	fubp1	100	94.801	ENSACLG00000006708	fubp1	100	94.495	Astatotilapia_calliptera
ENSPREG00000017911	fubp1	99	85.687	ENSAMXG00000005525	fubp1	99	85.122	Astyanax_mexicanus
ENSPREG00000017911	fubp1	70	78.808	ENSCJAG00000007062	FUBP1	99	71.692	Callithrix_jacchus
ENSPREG00000017911	fubp1	70	78.384	ENSCAFG00000020361	FUBP1	99	71.450	Canis_familiaris
ENSPREG00000017911	fubp1	64	83.862	ENSTSYG00000000148	FUBP1	99	71.870	Carlito_syrichta
ENSPREG00000017911	fubp1	62	84.681	ENSCAPG00000011052	-	65	84.681	Cavia_aperea
ENSPREG00000017911	fubp1	70	78.384	ENSCPOG00000002757	FUBP1	98	71.277	Cavia_porcellus
ENSPREG00000017911	fubp1	91	64.000	ENSCCAG00000036537	FUBP1	100	64.571	Cebus_capucinus
ENSPREG00000017911	fubp1	70	78.166	ENSCATG00000042126	FUBP1	99	71.298	Cercocebus_atys
ENSPREG00000017911	fubp1	70	78.384	ENSCLAG00000005621	FUBP1	100	72.152	Chinchilla_lanigera
ENSPREG00000017911	fubp1	70	78.166	ENSCSAG00000001402	FUBP1	99	71.298	Chlorocebus_sabaeus
ENSPREG00000017911	fubp1	70	78.166	ENSCHOG00000008177	FUBP1	98	71.603	Choloepus_hoffmanni
ENSPREG00000017911	fubp1	70	80.134	ENSCGRG00001007103	Fubp1	99	71.822	Cricetulus_griseus_chok1gshd
ENSPREG00000017911	fubp1	63	84.457	ENSCGRG00000003372	Fubp1	99	71.683	Cricetulus_griseus_crigri
ENSPREG00000017911	fubp1	99	93.780	ENSCSEG00000021412	fubp1	98	93.142	Cynoglossus_semilaevis
ENSPREG00000017911	fubp1	99	98.160	ENSCVAG00000014487	fubp1	99	98.160	Cyprinodon_variegatus
ENSPREG00000017911	fubp1	100	80.981	ENSDARG00000029248	fubp1	100	82.615	Danio_rerio
ENSPREG00000017911	fubp1	82	53.571	ENSDNOG00000034565	-	83	49.438	Dasypus_novemcinctus
ENSPREG00000017911	fubp1	70	78.384	ENSDORG00000016534	Fubp1	98	71.450	Dipodomys_ordii
ENSPREG00000017911	fubp1	70	85.470	ENSETEG00000000948	-	53	78.947	Echinops_telfairi
ENSPREG00000017911	fubp1	96	46.555	ENSEBUG00000016143	fubp1	63	67.797	Eptatretus_burgeri
ENSPREG00000017911	fubp1	72	82.432	ENSEEUG00000001287	FUBP1	87	65.517	Erinaceus_europaeus
ENSPREG00000017911	fubp1	100	84.662	ENSELUG00000007990	fubp1	100	85.263	Esox_lucius
ENSPREG00000017911	fubp1	70	79.379	ENSFALG00000005768	FUBP1	98	72.265	Ficedula_albicollis
ENSPREG00000017911	fubp1	70	78.166	ENSFDAG00000014210	FUBP1	100	70.270	Fukomys_damarensis
ENSPREG00000017911	fubp1	100	98.930	ENSFHEG00000005230	fubp1	100	98.930	Fundulus_heteroclitus
ENSPREG00000017911	fubp1	99	86.916	ENSGMOG00000003370	fubp1	99	84.202	Gadus_morhua
ENSPREG00000017911	fubp1	70	79.867	ENSGALG00000008939	FUBP1	99	73.035	Gallus_gallus
ENSPREG00000017911	fubp1	100	97.444	ENSGAFG00000020972	fubp1	100	97.444	Gambusia_affinis
ENSPREG00000017911	fubp1	99	94.019	ENSGACG00000016563	fubp1	99	90.267	Gasterosteus_aculeatus
ENSPREG00000017911	fubp1	100	95.413	ENSHBUG00000009835	fubp1	100	94.801	Haplochromis_burtoni
ENSPREG00000017911	fubp1	99	67.603	ENSHGLG00000002808	-	100	62.130	Heterocephalus_glaber_female
ENSPREG00000017911	fubp1	70	78.384	ENSHGLG00000008415	-	100	72.152	Heterocephalus_glaber_female
ENSPREG00000017911	fubp1	99	68.165	ENSHGLG00100001414	-	100	62.722	Heterocephalus_glaber_male
ENSPREG00000017911	fubp1	70	78.384	ENSHGLG00100003417	-	99	70.624	Heterocephalus_glaber_male
ENSPREG00000017911	fubp1	100	90.149	ENSHCOG00000000910	fubp1	100	91.343	Hippocampus_comes
ENSPREG00000017911	fubp1	100	83.485	ENSIPUG00000009896	fubp1	100	84.545	Ictalurus_punctatus
ENSPREG00000017911	fubp1	70	78.971	ENSSTOG00000014312	FUBP1	100	71.736	Ictidomys_tridecemlineatus
ENSPREG00000017911	fubp1	70	79.018	ENSJJAG00000020069	Fubp1	99	71.516	Jaculus_jaculus
ENSPREG00000017911	fubp1	100	96.499	ENSKMAG00000018897	fubp1	100	96.499	Kryptolebias_marmoratus
ENSPREG00000017911	fubp1	99	92.399	ENSLBEG00000012700	fubp1	97	92.548	Labrus_bergylta
ENSPREG00000017911	fubp1	97	80.422	ENSLOCG00000003745	fubp1	99	79.442	Lepisosteus_oculatus
ENSPREG00000017911	fubp1	63	84.457	ENSLAFG00000003273	FUBP1	98	73.993	Loxodonta_africana
ENSPREG00000017911	fubp1	70	78.587	ENSMFAG00000031825	FUBP1	99	71.538	Macaca_fascicularis
ENSPREG00000017911	fubp1	70	78.747	ENSMMUG00000002899	FUBP1	99	71.298	Macaca_mulatta
ENSPREG00000017911	fubp1	70	78.166	ENSMNEG00000045212	FUBP1	99	71.298	Macaca_nemestrina
ENSPREG00000017911	fubp1	99	93.514	ENSMAMG00000007489	fubp1	99	92.911	Mastacembelus_armatus
ENSPREG00000017911	fubp1	100	95.260	ENSMZEG00005024298	fubp1	100	94.648	Maylandia_zebra
ENSPREG00000017911	fubp1	63	84.795	ENSMGAG00000009424	FUBP1	99	72.995	Meleagris_gallopavo
ENSPREG00000017911	fubp1	70	78.603	ENSMAUG00000016428	Fubp1	97	75.139	Mesocricetus_auratus
ENSPREG00000017911	fubp1	70	79.075	ENSMOCG00000014751	Fubp1	99	71.739	Microtus_ochrogaster
ENSPREG00000017911	fubp1	99	93.058	ENSMMOG00000019463	fubp1	99	92.495	Mola_mola
ENSPREG00000017911	fubp1	67	72.870	ENSMODG00000020804	FUBP1	100	67.185	Monodelphis_domestica
ENSPREG00000017911	fubp1	100	95.566	ENSMALG00000015173	fubp1	100	94.954	Monopterus_albus
ENSPREG00000017911	fubp1	70	79.510	MGP_CAROLIEiJ_G0025740	Fubp1	99	76.145	Mus_caroli
ENSPREG00000017911	fubp1	70	79.287	ENSMUSG00000028034	Fubp1	99	75.954	Mus_musculus
ENSPREG00000017911	fubp1	70	79.333	MGP_PahariEiJ_G0027191	Fubp1	99	76.000	Mus_pahari
ENSPREG00000017911	fubp1	70	79.510	MGP_SPRETEiJ_G0026693	Fubp1	99	76.145	Mus_spretus
ENSPREG00000017911	fubp1	63	84.211	ENSMLUG00000014802	FUBP1	99	68.869	Myotis_lucifugus
ENSPREG00000017911	fubp1	63	84.457	ENSNGAG00000014302	Fubp1	98	70.270	Nannospalax_galili
ENSPREG00000017911	fubp1	99	90.271	ENSNBRG00000015099	fubp1	99	90.431	Neolamprologus_brichardi
ENSPREG00000017911	fubp1	70	74.123	ENSNLEG00000009772	FUBP1	99	70.138	Nomascus_leucogenys
ENSPREG00000017911	fubp1	88	70.487	ENSOPRG00000001175	FUBP1	98	61.409	Ochotona_princeps
ENSPREG00000017911	fubp1	70	78.384	ENSODEG00000002600	-	100	70.270	Octodon_degus
ENSPREG00000017911	fubp1	99	54.275	ENSODEG00000003657	-	100	51.577	Octodon_degus
ENSPREG00000017911	fubp1	99	95.399	ENSONIG00000018381	fubp1	100	93.849	Oreochromis_niloticus
ENSPREG00000017911	fubp1	63	84.457	ENSOANG00000009777	FUBP1	99	71.082	Ornithorhynchus_anatinus
ENSPREG00000017911	fubp1	99	89.077	ENSORLG00000003540	fubp1	99	89.348	Oryzias_latipes
ENSPREG00000017911	fubp1	100	93.921	ENSORLG00020005908	fubp1	96	93.921	Oryzias_latipes_hni
ENSPREG00000017911	fubp1	100	94.082	ENSORLG00015008779	fubp1	99	93.455	Oryzias_latipes_hsok
ENSPREG00000017911	fubp1	100	93.760	ENSOMEG00000021943	fubp1	97	94.064	Oryzias_melastigma
ENSPREG00000017911	fubp1	63	83.965	ENSOGAG00000014233	FUBP1	99	68.768	Otolemur_garnettii
ENSPREG00000017911	fubp1	70	78.808	ENSOARG00000013259	FUBP1	100	73.254	Ovis_aries
ENSPREG00000017911	fubp1	70	78.384	ENSPPRG00000000413	FUBP1	99	71.450	Panthera_pardus
ENSPREG00000017911	fubp1	70	78.384	ENSPTIG00000019450	FUBP1	99	71.450	Panthera_tigris_altaica
ENSPREG00000017911	fubp1	63	84.164	ENSPSIG00000012965	FUBP1	99	71.812	Pelodiscus_sinensis
ENSPREG00000017911	fubp1	99	86.059	ENSPMGG00000009060	fubp1	99	82.629	Periophthalmus_magnuspinnatus
ENSPREG00000017911	fubp1	70	79.470	ENSPEMG00000021802	Fubp1	100	70.270	Peromyscus_maniculatus_bairdii
ENSPREG00000017911	fubp1	57	59.825	ENSPMAG00000001644	-	93	59.825	Petromyzon_marinus
ENSPREG00000017911	fubp1	100	99.847	ENSPFOG00000000238	fubp1	100	99.847	Poecilia_formosa
ENSPREG00000017911	fubp1	100	97.706	ENSPLAG00000021170	fubp1	100	97.706	Poecilia_latipinna
ENSPREG00000017911	fubp1	99	97.552	ENSPMEG00000004747	fubp1	99	99.833	Poecilia_mexicana
ENSPREG00000017911	fubp1	71	78.017	ENSPPYG00000001219	-	68	79.157	Pongo_abelii
ENSPREG00000017911	fubp1	70	78.337	ENSPCAG00000012617	FUBP1	98	71.407	Procavia_capensis
ENSPREG00000017911	fubp1	70	78.714	ENSPCOG00000024974	FUBP1	99	71.450	Propithecus_coquereli
ENSPREG00000017911	fubp1	70	72.271	ENSPVAG00000014637	FUBP1	98	67.481	Pteropus_vampyrus
ENSPREG00000017911	fubp1	100	95.260	ENSPNYG00000004552	fubp1	100	94.648	Pundamilia_nyererei
ENSPREG00000017911	fubp1	100	86.103	ENSPNAG00000016207	fubp1	100	85.952	Pygocentrus_nattereri
ENSPREG00000017911	fubp1	70	79.510	ENSRNOG00000043370	Fubp1	99	71.957	Rattus_norvegicus
ENSPREG00000017911	fubp1	70	78.166	ENSRBIG00000042950	FUBP1	99	71.298	Rhinopithecus_bieti
ENSPREG00000017911	fubp1	70	78.166	ENSRROG00000043534	FUBP1	99	71.298	Rhinopithecus_roxellana
ENSPREG00000017911	fubp1	70	78.384	ENSSBOG00000027299	FUBP1	99	74.725	Saimiri_boliviensis_boliviensis
ENSPREG00000017911	fubp1	63	83.871	ENSSHAG00000005367	FUBP1	99	74.444	Sarcophilus_harrisii
ENSPREG00000017911	fubp1	99	83.129	ENSSFOG00015010213	fubp1	99	82.975	Scleropages_formosus
ENSPREG00000017911	fubp1	100	89.732	ENSSMAG00000012029	fubp1	98	89.435	Scophthalmus_maximus
ENSPREG00000017911	fubp1	100	94.887	ENSSDUG00000007383	fubp1	98	94.887	Seriola_dumerili
ENSPREG00000017911	fubp1	100	94.887	ENSSLDG00000022863	fubp1	98	94.887	Seriola_lalandi_dorsalis
ENSPREG00000017911	fubp1	70	87.356	ENSSARG00000011730	FUBP1	56	88.372	Sorex_araneus
ENSPREG00000017911	fubp1	99	68.877	ENSSPUG00000008389	FUBP1	100	68.208	Sphenodon_punctatus
ENSPREG00000017911	fubp1	100	96.483	ENSSPAG00000010161	fubp1	100	96.483	Stegastes_partitus
ENSPREG00000017911	fubp1	63	83.285	ENSTGUG00000006841	FUBP1	100	72.240	Taeniopygia_guttata
ENSPREG00000017911	fubp1	100	87.316	ENSTRUG00000004615	fubp1	100	87.758	Takifugu_rubripes
ENSPREG00000017911	fubp1	59	94.656	ENSTNIG00000019815	-	87	94.558	Tetraodon_nigroviridis
ENSPREG00000017911	fubp1	78	84.091	ENSTBEG00000017333	FUBP1	62	88.690	Tupaia_belangeri
ENSPREG00000017911	fubp1	70	78.384	ENSTTRG00000000096	FUBP1	98	71.298	Tursiops_truncatus
ENSPREG00000017911	fubp1	70	78.384	ENSVPAG00000004709	FUBP1	99	71.298	Vicugna_pacos
ENSPREG00000017911	fubp1	99	91.932	ENSXCOG00000019354	fubp1	99	87.836	Xiphophorus_couchianus
ENSPREG00000017911	fubp1	100	98.145	ENSXMAG00000007168	fubp1	99	99.498	Xiphophorus_maculatus