EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000017993 (Gene tree)
Gene ID: 103467487
Gene Symbol: prpf6
Alias: -
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 13989 bases
Position: chrLG7:23724799-23738787
Accession: 103467487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000026633	PRP1_N	PF06424.12	1.9e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000026912	-	5699	XM_008413905	ENSPREP00000026633	1016 (aa)	XP_008412127	-

Gene Model

Click here to download ENSPREG00000017993's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000017993's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000017993	prpf6	92	92.667	ENSG00000101161	PRPF6	100	92.242	Homo_sapiens
ENSPREG00000017993	prpf6	95	97.420	ENSAPOG00000010395	prpf6	100	97.420	Acanthochromis_polyacanthus
ENSPREG00000017993	prpf6	92	92.251	ENSAMEG00000001916	PRPF6	99	91.826	Ailuropoda_melanoleuca
ENSPREG00000017993	prpf6	95	97.523	ENSACIG00000019862	prpf6	100	97.523	Amphilophus_citrinellus
ENSPREG00000017993	prpf6	95	97.523	ENSAOCG00000012988	prpf6	100	97.523	Amphiprion_ocellaris
ENSPREG00000017993	prpf6	92	91.505	ENSAPEG00000008301	prpf6	100	91.720	Amphiprion_percula
ENSPREG00000017993	prpf6	95	96.904	ENSATEG00000005581	prpf6	100	96.904	Anabas_testudineus
ENSPREG00000017993	prpf6	92	93.305	ENSACAG00000006464	PRPF6	95	92.880	Anolis_carolinensis
ENSPREG00000017993	prpf6	92	92.667	ENSANAG00000012661	PRPF6	100	93.286	Aotus_nancymaae
ENSPREG00000017993	prpf6	95	97.730	ENSACLG00000025875	prpf6	100	97.730	Astatotilapia_calliptera
ENSPREG00000017993	prpf6	92	94.597	ENSAMXG00000001929	prpf6	100	92.930	Astyanax_mexicanus
ENSPREG00000017993	prpf6	92	93.199	ENSBTAG00000011656	PRPF6	100	92.774	Bos_taurus
ENSPREG00000017993	prpf6	92	92.667	ENSCJAG00000010616	PRPF6	100	92.242	Callithrix_jacchus
ENSPREG00000017993	prpf6	92	93.305	ENSCAFG00000013165	PRPF6	100	92.880	Canis_familiaris
ENSPREG00000017993	prpf6	92	93.305	ENSCAFG00020002050	PRPF6	100	92.880	Canis_lupus_dingo
ENSPREG00000017993	prpf6	92	93.199	ENSCHIG00000018187	PRPF6	100	92.774	Capra_hircus
ENSPREG00000017993	prpf6	92	93.305	ENSTSYG00000007814	PRPF6	100	92.880	Carlito_syrichta
ENSPREG00000017993	prpf6	89	92.475	ENSCAPG00000015077	PRPF6	100	91.603	Cavia_aperea
ENSPREG00000017993	prpf6	92	93.730	ENSCPOG00000007518	PRPF6	100	93.305	Cavia_porcellus
ENSPREG00000017993	prpf6	92	89.586	ENSCCAG00000024564	PRPF6	100	89.160	Cebus_capucinus
ENSPREG00000017993	prpf6	92	92.774	ENSCATG00000037473	PRPF6	100	92.349	Cercocebus_atys
ENSPREG00000017993	prpf6	92	89.904	ENSCLAG00000003854	PRPF6	100	89.479	Chinchilla_lanigera
ENSPREG00000017993	prpf6	92	88.173	ENSCSAG00000016742	PRPF6	100	87.751	Chlorocebus_sabaeus
ENSPREG00000017993	prpf6	78	78.374	ENSCHOG00000003315	-	98	78.182	Choloepus_hoffmanni
ENSPREG00000017993	prpf6	94	91.883	ENSCPBG00000013964	PRPF6	96	93.085	Chrysemys_picta_bellii
ENSPREG00000017993	prpf6	91	72.516	ENSCING00000008817	-	99	72.093	Ciona_intestinalis
ENSPREG00000017993	prpf6	92	92.561	ENSCANG00000038230	PRPF6	100	92.136	Colobus_angolensis_palliatus
ENSPREG00000017993	prpf6	92	93.730	ENSCGRG00001022666	Prpf6	100	93.305	Cricetulus_griseus_chok1gshd
ENSPREG00000017993	prpf6	92	92.151	ENSCSEG00000018561	prpf6	100	92.151	Cynoglossus_semilaevis
ENSPREG00000017993	prpf6	95	97.730	ENSCVAG00000010550	prpf6	100	97.730	Cyprinodon_variegatus
ENSPREG00000017993	prpf6	95	92.930	ENSDARG00000091367	prpf6	100	94.492	Danio_rerio
ENSPREG00000017993	prpf6	92	92.667	ENSDNOG00000040544	PRPF6	100	92.349	Dasypus_novemcinctus
ENSPREG00000017993	prpf6	83	92.757	ENSDORG00000005406	Prpf6	100	92.757	Dipodomys_ordii
ENSPREG00000017993	prpf6	92	71.613	FBgn0036828	CG6841	99	71.720	Drosophila_melanogaster
ENSPREG00000017993	prpf6	79	91.959	ENSETEG00000004447	PRPF6	85	91.959	Echinops_telfairi
ENSPREG00000017993	prpf6	92	86.349	ENSEBUG00000008835	prpf6	100	85.926	Eptatretus_burgeri
ENSPREG00000017993	prpf6	92	93.411	ENSEASG00005023115	PRPF6	100	92.986	Equus_asinus_asinus
ENSPREG00000017993	prpf6	92	89.160	ENSECAG00000013983	PRPF6	100	88.735	Equus_caballus
ENSPREG00000017993	prpf6	82	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSPREG00000017993	prpf6	92	94.586	ENSELUG00000001945	prpf6	94	94.586	Esox_lucius
ENSPREG00000017993	prpf6	92	93.305	ENSFCAG00000001183	PRPF6	100	92.880	Felis_catus
ENSPREG00000017993	prpf6	92	93.228	ENSFALG00000010326	-	98	92.910	Ficedula_albicollis
ENSPREG00000017993	prpf6	92	87.021	ENSFALG00000006046	-	97	87.300	Ficedula_albicollis
ENSPREG00000017993	prpf6	92	92.349	ENSFDAG00000006451	PRPF6	100	92.971	Fukomys_damarensis
ENSPREG00000017993	prpf6	95	98.246	ENSFHEG00000000560	prpf6	100	98.246	Fundulus_heteroclitus
ENSPREG00000017993	prpf6	92	94.168	ENSGMOG00000015622	prpf6	99	93.637	Gadus_morhua
ENSPREG00000017993	prpf6	92	93.305	ENSGALG00000006001	PRPF6	100	92.986	Gallus_gallus
ENSPREG00000017993	prpf6	95	94.737	ENSGAFG00000021109	prpf6	100	94.737	Gambusia_affinis
ENSPREG00000017993	prpf6	92	95.975	ENSGACG00000002576	prpf6	100	95.975	Gasterosteus_aculeatus
ENSPREG00000017993	prpf6	94	92.083	ENSGAGG00000008653	PRPF6	96	93.191	Gopherus_agassizii
ENSPREG00000017993	prpf6	92	92.667	ENSGGOG00000016876	PRPF6	100	92.242	Gorilla_gorilla
ENSPREG00000017993	prpf6	95	97.730	ENSHBUG00000004496	prpf6	100	97.730	Haplochromis_burtoni
ENSPREG00000017993	prpf6	92	93.624	ENSHGLG00000009222	PRPF6	100	93.199	Heterocephalus_glaber_female
ENSPREG00000017993	prpf6	89	93.566	ENSHGLG00100016600	PRPF6	100	93.130	Heterocephalus_glaber_male
ENSPREG00000017993	prpf6	95	95.253	ENSHCOG00000011513	prpf6	100	95.253	Hippocampus_comes
ENSPREG00000017993	prpf6	95	92.505	ENSIPUG00000004912	prpf6	100	92.505	Ictalurus_punctatus
ENSPREG00000017993	prpf6	92	91.189	ENSSTOG00000002922	PRPF6	100	90.340	Ictidomys_tridecemlineatus
ENSPREG00000017993	prpf6	92	93.730	ENSJJAG00000000836	Prpf6	100	93.305	Jaculus_jaculus
ENSPREG00000017993	prpf6	95	97.214	ENSKMAG00000017800	prpf6	100	97.214	Kryptolebias_marmoratus
ENSPREG00000017993	prpf6	95	96.285	ENSLBEG00000012582	prpf6	100	96.285	Labrus_bergylta
ENSPREG00000017993	prpf6	94	93.028	ENSLOCG00000004827	prpf6	96	92.766	Lepisosteus_oculatus
ENSPREG00000017993	prpf6	92	92.774	ENSLAFG00000005272	PRPF6	100	92.349	Loxodonta_africana
ENSPREG00000017993	prpf6	92	92.561	ENSMFAG00000037542	PRPF6	100	92.136	Macaca_fascicularis
ENSPREG00000017993	prpf6	92	86.412	ENSMMUG00000015558	PRPF6	98	93.934	Macaca_mulatta
ENSPREG00000017993	prpf6	92	80.191	ENSMNEG00000045555	PRPF6	100	79.767	Macaca_nemestrina
ENSPREG00000017993	prpf6	95	97.110	ENSMAMG00000010718	prpf6	100	97.110	Mastacembelus_armatus
ENSPREG00000017993	prpf6	86	97.943	ENSMZEG00005026539	prpf6	100	97.943	Maylandia_zebra
ENSPREG00000017993	prpf6	92	97.974	ENSMZEG00005015261	-	100	97.974	Maylandia_zebra
ENSPREG00000017993	prpf6	89	93.457	ENSMGAG00000006634	PRPF6	100	93.130	Meleagris_gallopavo
ENSPREG00000017993	prpf6	92	93.730	ENSMAUG00000013969	Prpf6	100	93.305	Mesocricetus_auratus
ENSPREG00000017993	prpf6	80	92.457	ENSMICG00000017793	PRPF6	98	92.478	Microcebus_murinus
ENSPREG00000017993	prpf6	92	93.624	ENSMOCG00000001701	Prpf6	100	93.199	Microtus_ochrogaster
ENSPREG00000017993	prpf6	92	97.419	ENSMMOG00000020419	prpf6	100	97.419	Mola_mola
ENSPREG00000017993	prpf6	89	94.451	ENSMODG00000017051	PRPF6	99	93.958	Monodelphis_domestica
ENSPREG00000017993	prpf6	91	97.609	ENSMALG00000000089	prpf6	100	97.609	Monopterus_albus
ENSPREG00000017993	prpf6	92	87.460	MGP_CAROLIEiJ_G0024814	Prpf6	100	96.296	Mus_caroli
ENSPREG00000017993	prpf6	92	93.730	ENSMUSG00000002455	Prpf6	100	96.296	Mus_musculus
ENSPREG00000017993	prpf6	92	93.730	MGP_PahariEiJ_G0026262	Prpf6	100	96.296	Mus_pahari
ENSPREG00000017993	prpf6	92	93.730	MGP_SPRETEiJ_G0025741	Prpf6	100	96.296	Mus_spretus
ENSPREG00000017993	prpf6	82	93.317	ENSMPUG00000008673	PRPF6	98	93.317	Mustela_putorius_furo
ENSPREG00000017993	prpf6	92	93.836	ENSNGAG00000003365	Prpf6	100	93.411	Nannospalax_galili
ENSPREG00000017993	prpf6	95	97.833	ENSNBRG00000015025	prpf6	100	97.833	Neolamprologus_brichardi
ENSPREG00000017993	prpf6	92	92.561	ENSNLEG00000010208	PRPF6	100	92.136	Nomascus_leucogenys
ENSPREG00000017993	prpf6	92	84.137	ENSMEUG00000009824	-	90	84.387	Notamacropus_eugenii
ENSPREG00000017993	prpf6	92	87.779	ENSODEG00000004841	PRPF6	100	87.354	Octodon_degus
ENSPREG00000017993	prpf6	95	97.523	ENSONIG00000017406	prpf6	100	97.523	Oreochromis_niloticus
ENSPREG00000017993	prpf6	92	93.518	ENSOANG00000004920	PRPF6	100	93.092	Ornithorhynchus_anatinus
ENSPREG00000017993	prpf6	91	91.416	ENSOCUG00000014151	PRPF6	100	90.987	Oryctolagus_cuniculus
ENSPREG00000017993	prpf6	95	96.904	ENSORLG00000009592	prpf6	100	96.904	Oryzias_latipes
ENSPREG00000017993	prpf6	95	97.007	ENSORLG00020001458	prpf6	100	97.007	Oryzias_latipes_hni
ENSPREG00000017993	prpf6	95	97.007	ENSORLG00015018762	prpf6	100	97.007	Oryzias_latipes_hsok
ENSPREG00000017993	prpf6	95	97.317	ENSOMEG00000012174	prpf6	100	97.317	Oryzias_melastigma
ENSPREG00000017993	prpf6	92	86.412	ENSOGAG00000007573	PRPF6	100	85.987	Otolemur_garnettii
ENSPREG00000017993	prpf6	92	92.774	ENSOARG00000008776	PRPF6	99	92.349	Ovis_aries
ENSPREG00000017993	prpf6	92	92.667	ENSPPAG00000008686	PRPF6	100	92.242	Pan_paniscus
ENSPREG00000017993	prpf6	92	93.305	ENSPPRG00000008497	PRPF6	100	92.880	Panthera_pardus
ENSPREG00000017993	prpf6	89	93.239	ENSPTIG00000011184	PRPF6	97	92.803	Panthera_tigris_altaica
ENSPREG00000017993	prpf6	92	92.667	ENSPTRG00000013765	PRPF6	100	92.242	Pan_troglodytes
ENSPREG00000017993	prpf6	92	92.349	ENSPANG00000024135	PRPF6	100	91.923	Papio_anubis
ENSPREG00000017993	prpf6	99	89.105	ENSPKIG00000005627	prpf6	99	94.574	Paramormyrops_kingsleyae
ENSPREG00000017993	prpf6	86	93.197	ENSPSIG00000007717	PRPF6	100	92.744	Pelodiscus_sinensis
ENSPREG00000017993	prpf6	95	94.318	ENSPMGG00000008925	prpf6	99	93.595	Periophthalmus_magnuspinnatus
ENSPREG00000017993	prpf6	92	93.730	ENSPEMG00000016036	Prpf6	100	93.305	Peromyscus_maniculatus_bairdii
ENSPREG00000017993	prpf6	93	87.356	ENSPMAG00000006144	prpf6	100	87.987	Petromyzon_marinus
ENSPREG00000017993	prpf6	92	93.624	ENSPCIG00000017909	PRPF6	100	93.199	Phascolarctos_cinereus
ENSPREG00000017993	prpf6	96	98.269	ENSPFOG00000006431	prpf6	100	98.269	Poecilia_formosa
ENSPREG00000017993	prpf6	95	99.071	ENSPLAG00000005974	prpf6	100	99.071	Poecilia_latipinna
ENSPREG00000017993	prpf6	95	99.484	ENSPMEG00000009977	prpf6	100	99.484	Poecilia_mexicana
ENSPREG00000017993	prpf6	92	92.136	ENSPPYG00000011256	PRPF6	100	91.711	Pongo_abelii
ENSPREG00000017993	prpf6	87	95.425	ENSPCAG00000006536	PRPF6	88	95.425	Procavia_capensis
ENSPREG00000017993	prpf6	92	92.880	ENSPCOG00000016881	PRPF6	100	92.455	Propithecus_coquereli
ENSPREG00000017993	prpf6	92	87.354	ENSPVAG00000014316	PRPF6	100	86.929	Pteropus_vampyrus
ENSPREG00000017993	prpf6	95	83.676	ENSPNYG00000001939	prpf6	100	83.676	Pundamilia_nyererei
ENSPREG00000017993	prpf6	92	95.127	ENSPNAG00000015606	prpf6	100	93.238	Pygocentrus_nattereri
ENSPREG00000017993	prpf6	92	93.624	ENSRNOG00000051498	Prpf6	100	93.199	Rattus_norvegicus
ENSPREG00000017993	prpf6	92	92.561	ENSRBIG00000043613	PRPF6	100	92.136	Rhinopithecus_bieti
ENSPREG00000017993	prpf6	92	89.524	ENSRROG00000040969	PRPF6	98	92.561	Rhinopithecus_roxellana
ENSPREG00000017993	prpf6	83	90.088	ENSSBOG00000020632	PRPF6	93	87.889	Saimiri_boliviensis_boliviensis
ENSPREG00000017993	prpf6	92	93.624	ENSSHAG00000016810	PRPF6	100	93.199	Sarcophilus_harrisii
ENSPREG00000017993	prpf6	91	94.946	ENSSFOG00015020859	prpf6	100	94.516	Scleropages_formosus
ENSPREG00000017993	prpf6	95	95.769	ENSSMAG00000008112	prpf6	100	95.769	Scophthalmus_maximus
ENSPREG00000017993	prpf6	95	97.007	ENSSDUG00000016142	prpf6	100	97.007	Seriola_dumerili
ENSPREG00000017993	prpf6	95	97.007	ENSSLDG00000025283	prpf6	99	97.007	Seriola_lalandi_dorsalis
ENSPREG00000017993	prpf6	86	92.168	ENSSPUG00000018260	PRPF6	100	91.714	Sphenodon_punctatus
ENSPREG00000017993	prpf6	95	97.317	ENSSPAG00000015850	prpf6	100	97.317	Stegastes_partitus
ENSPREG00000017993	prpf6	92	92.880	ENSSSCG00000029119	PRPF6	98	92.725	Sus_scrofa
ENSPREG00000017993	prpf6	92	93.326	ENSTGUG00000007221	PRPF6	100	93.008	Taeniopygia_guttata
ENSPREG00000017993	prpf6	95	95.975	ENSTRUG00000002920	prpf6	100	95.975	Takifugu_rubripes
ENSPREG00000017993	prpf6	92	90.011	ENSTNIG00000017873	prpf6	100	90.011	Tetraodon_nigroviridis
ENSPREG00000017993	prpf6	81	94.444	ENSTBEG00000005348	PRPF6	85	92.222	Tupaia_belangeri
ENSPREG00000017993	prpf6	92	92.986	ENSTTRG00000013068	PRPF6	100	92.561	Tursiops_truncatus
ENSPREG00000017993	prpf6	93	88.658	ENSUMAG00000021631	PRPF6	98	91.385	Ursus_maritimus
ENSPREG00000017993	prpf6	92	93.305	ENSVVUG00000014948	PRPF6	100	92.880	Vulpes_vulpes
ENSPREG00000017993	prpf6	93	91.728	ENSXETG00000012054	prpf6	97	92.340	Xenopus_tropicalis
ENSPREG00000017993	prpf6	95	99.174	ENSXCOG00000008082	prpf6	100	99.174	Xiphophorus_couchianus
ENSPREG00000017993	prpf6	95	99.071	ENSXMAG00000015581	prpf6	100	99.071	Xiphophorus_maculatus