EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000018185 (Gene tree)
Gene ID: 103470187
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 11594 bases
Position: chrLG9:18940692-18952285
Accession: 103470187
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000026967	ResIII	PF04851.15	3.3e-06	1	1
ENSPREP00000026923	ResIII	PF04851.15	3.6e-06	1	1
ENSPREP00000026907	ResIII	PF04851.15	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000027248	-	3608	-	ENSPREP00000026967	982 (aa)	-	-
ENSPRET00000027203	-	3156	XM_008418412	ENSPREP00000026923	1051 (aa)	XP_008416634	UPI0004A25D99
ENSPRET00000027187	-	3273	XM_008418411	ENSPREP00000026907	1090 (aa)	XP_008416633	UPI0004A24E64

Gene Model

Click here to download ENSPREG00000018185's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000018185's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000018185	smarcad1a	52	30.926	ENSPREG00000019955	rad54l	68	30.926
ENSPREG00000018185	smarcad1a	52	36.535	ENSPREG00000020337	hells	68	36.535
ENSPREG00000018185	smarcad1a	51	36.310	ENSPREG00000017885	chd1l	50	36.310
ENSPREG00000018185	smarcad1a	51	36.822	ENSPREG00000022653	chd6	75	36.184
ENSPREG00000018185	smarcad1a	50	31.154	ENSPREG00000018443	rad54b	56	31.154

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000018185	smarcad1a	94	62.587	ENSG00000163104	SMARCAD1	99	67.508	Homo_sapiens
ENSPREG00000018185	smarcad1a	100	75.305	ENSAPOG00000011446	smarcad1a	100	75.305	Acanthochromis_polyacanthus
ENSPREG00000018185	smarcad1a	94	62.587	ENSAMEG00000005844	SMARCAD1	95	67.083	Ailuropoda_melanoleuca
ENSPREG00000018185	smarcad1a	71	84.084	ENSACIG00000018326	smarcad1a	93	84.060	Amphilophus_citrinellus
ENSPREG00000018185	smarcad1a	100	74.930	ENSAOCG00000019762	smarcad1a	100	75.351	Amphiprion_ocellaris
ENSPREG00000018185	smarcad1a	100	75.164	ENSAPEG00000003889	smarcad1a	100	75.258	Amphiprion_percula
ENSPREG00000018185	smarcad1a	97	72.793	ENSATEG00000015608	smarcad1a	99	74.162	Anabas_testudineus
ENSPREG00000018185	smarcad1a	76	67.290	ENSAPLG00000004630	SMARCAD1	88	67.290	Anas_platyrhynchos
ENSPREG00000018185	smarcad1a	93	65.938	ENSACAG00000013554	SMARCAD1	100	47.278	Anolis_carolinensis
ENSPREG00000018185	smarcad1a	94	62.275	ENSANAG00000020488	SMARCAD1	100	63.390	Aotus_nancymaae
ENSPREG00000018185	smarcad1a	100	72.222	ENSACLG00000017063	smarcad1a	100	73.095	Astatotilapia_calliptera
ENSPREG00000018185	smarcad1a	76	70.700	ENSAMXG00000019130	smarcad1b	95	70.700	Astyanax_mexicanus
ENSPREG00000018185	smarcad1a	71	69.429	ENSAMXG00000015470	smarcad1a	98	69.429	Astyanax_mexicanus
ENSPREG00000018185	smarcad1a	94	62.275	ENSBTAG00000017061	SMARCAD1	95	66.719	Bos_taurus
ENSPREG00000018185	smarcad1a	64	40.973	WBGene00010845	M03C11.8	69	39.828	Caenorhabditis_elegans
ENSPREG00000018185	smarcad1a	94	62.587	ENSCJAG00000006778	SMARCAD1	100	63.714	Callithrix_jacchus
ENSPREG00000018185	smarcad1a	94	62.448	ENSCAFG00000010026	SMARCAD1	99	63.873	Canis_familiaris
ENSPREG00000018185	smarcad1a	87	62.448	ENSCAFG00020003994	SMARCAD1	97	63.781	Canis_lupus_dingo
ENSPREG00000018185	smarcad1a	94	62.448	ENSCHIG00000012905	SMARCAD1	95	67.083	Capra_hircus
ENSPREG00000018185	smarcad1a	92	62.587	ENSTSYG00000002706	SMARCAD1	99	63.533	Carlito_syrichta
ENSPREG00000018185	smarcad1a	90	54.899	ENSCAPG00000016744	SMARCAD1	95	56.047	Cavia_aperea
ENSPREG00000018185	smarcad1a	92	61.699	ENSCPOG00000011398	SMARCAD1	93	66.927	Cavia_porcellus
ENSPREG00000018185	smarcad1a	94	62.726	ENSCCAG00000022264	SMARCAD1	99	67.677	Cebus_capucinus
ENSPREG00000018185	smarcad1a	94	62.587	ENSCATG00000035663	SMARCAD1	100	64.087	Cercocebus_atys
ENSPREG00000018185	smarcad1a	89	62.587	ENSCSAG00000004186	SMARCAD1	100	63.714	Chlorocebus_sabaeus
ENSPREG00000018185	smarcad1a	90	66.511	ENSCPBG00000013203	SMARCAD1	82	66.511	Chrysemys_picta_bellii
ENSPREG00000018185	smarcad1a	66	49.697	ENSCING00000001688	-	99	49.697	Ciona_intestinalis
ENSPREG00000018185	smarcad1a	94	62.448	ENSCANG00000003556	SMARCAD1	99	67.508	Colobus_angolensis_palliatus
ENSPREG00000018185	smarcad1a	92	60.272	ENSCGRG00001015056	Smarcad1	91	66.771	Cricetulus_griseus_chok1gshd
ENSPREG00000018185	smarcad1a	92	60.272	ENSCGRG00000014087	Smarcad1	91	66.771	Cricetulus_griseus_crigri
ENSPREG00000018185	smarcad1a	100	68.790	ENSCSEG00000017903	smarcad1a	100	68.975	Cynoglossus_semilaevis
ENSPREG00000018185	smarcad1a	100	68.494	ENSCSEG00000014419	-	100	68.533	Cynoglossus_semilaevis
ENSPREG00000018185	smarcad1a	88	69.103	ENSDARG00000014041	smarcad1a	100	71.512	Danio_rerio
ENSPREG00000018185	smarcad1a	66	72.811	ENSDARG00000073721	smarcad1b	71	70.760	Danio_rerio
ENSPREG00000018185	smarcad1a	94	62.587	ENSDNOG00000000806	-	95	67.083	Dasypus_novemcinctus
ENSPREG00000018185	smarcad1a	67	62.238	ENSDORG00000012331	Smarcad1	63	66.563	Dipodomys_ordii
ENSPREG00000018185	smarcad1a	65	44.462	FBgn0032157	Etl1	79	43.824	Drosophila_melanogaster
ENSPREG00000018185	smarcad1a	62	47.673	ENSEBUG00000003969	smarcad1a	98	47.013	Eptatretus_burgeri
ENSPREG00000018185	smarcad1a	94	62.587	ENSEASG00005012382	SMARCAD1	95	67.083	Equus_asinus_asinus
ENSPREG00000018185	smarcad1a	94	62.587	ENSECAG00000011562	SMARCAD1	95	67.083	Equus_caballus
ENSPREG00000018185	smarcad1a	100	65.356	ENSELUG00000018535	smarcad1a	100	64.981	Esox_lucius
ENSPREG00000018185	smarcad1a	80	67.660	ENSELUG00000019154	smarcad1b	81	69.152	Esox_lucius
ENSPREG00000018185	smarcad1a	94	62.865	ENSFCAG00000003958	SMARCAD1	99	67.677	Felis_catus
ENSPREG00000018185	smarcad1a	100	62.881	ENSFALG00000006089	SMARCAD1	100	64.613	Ficedula_albicollis
ENSPREG00000018185	smarcad1a	87	62.117	ENSFDAG00000017027	SMARCAD1	73	67.083	Fukomys_damarensis
ENSPREG00000018185	smarcad1a	100	79.745	ENSFHEG00000012778	smarcad1a	100	80.292	Fundulus_heteroclitus
ENSPREG00000018185	smarcad1a	88	77.100	ENSGMOG00000018995	smarcad1a	97	79.743	Gadus_morhua
ENSPREG00000018185	smarcad1a	91	60.027	ENSGALG00000037339	SMARCAD1	95	61.829	Gallus_gallus
ENSPREG00000018185	smarcad1a	100	90.009	ENSGAFG00000013498	smarcad1a	100	90.009	Gambusia_affinis
ENSPREG00000018185	smarcad1a	91	79.726	ENSGACG00000007327	smarcad1a	100	82.219	Gasterosteus_aculeatus
ENSPREG00000018185	smarcad1a	76	66.511	ENSGAGG00000008582	SMARCAD1	80	61.905	Gopherus_agassizii
ENSPREG00000018185	smarcad1a	94	62.587	ENSGGOG00000023001	SMARCAD1	100	63.714	Gorilla_gorilla
ENSPREG00000018185	smarcad1a	100	71.109	ENSHBUG00000011042	smarcad1a	100	72.625	Haplochromis_burtoni
ENSPREG00000018185	smarcad1a	100	62.117	ENSHGLG00000005070	SMARCAD1	95	67.083	Heterocephalus_glaber_female
ENSPREG00000018185	smarcad1a	100	62.117	ENSHGLG00100006812	SMARCAD1	95	67.083	Heterocephalus_glaber_male
ENSPREG00000018185	smarcad1a	98	65.914	ENSHCOG00000007848	smarcad1a	85	68.264	Hippocampus_comes
ENSPREG00000018185	smarcad1a	74	73.312	ENSIPUG00000022817	smarcad1b	88	71.088	Ictalurus_punctatus
ENSPREG00000018185	smarcad1a	98	56.695	ENSIPUG00000000242	smarcad1a	95	61.082	Ictalurus_punctatus
ENSPREG00000018185	smarcad1a	92	62.517	ENSSTOG00000001227	SMARCAD1	93	66.771	Ictidomys_tridecemlineatus
ENSPREG00000018185	smarcad1a	100	61.019	ENSJJAG00000022342	Smarcad1	95	66.615	Jaculus_jaculus
ENSPREG00000018185	smarcad1a	99	76.426	ENSKMAG00000021351	smarcad1a	99	76.141	Kryptolebias_marmoratus
ENSPREG00000018185	smarcad1a	100	70.544	ENSLBEG00000008088	smarcad1a	99	71.119	Labrus_bergylta
ENSPREG00000018185	smarcad1a	85	75.420	ENSLOCG00000012909	smarcad1a	96	73.862	Lepisosteus_oculatus
ENSPREG00000018185	smarcad1a	94	61.752	ENSLAFG00000000040	SMARCAD1	100	62.571	Loxodonta_africana
ENSPREG00000018185	smarcad1a	94	62.587	ENSMFAG00000042606	SMARCAD1	100	63.714	Macaca_fascicularis
ENSPREG00000018185	smarcad1a	89	62.587	ENSMMUG00000022242	SMARCAD1	97	63.714	Macaca_mulatta
ENSPREG00000018185	smarcad1a	94	62.587	ENSMNEG00000038117	SMARCAD1	99	67.508	Macaca_nemestrina
ENSPREG00000018185	smarcad1a	94	62.587	ENSMLEG00000038333	SMARCAD1	99	67.508	Mandrillus_leucophaeus
ENSPREG00000018185	smarcad1a	100	73.640	ENSMAMG00000000933	smarcad1a	100	74.482	Mastacembelus_armatus
ENSPREG00000018185	smarcad1a	100	71.604	ENSMZEG00005005203	smarcad1a	100	72.185	Maylandia_zebra
ENSPREG00000018185	smarcad1a	76	64.465	ENSMGAG00000005577	SMARCAD1	86	64.465	Meleagris_gallopavo
ENSPREG00000018185	smarcad1a	92	60.544	ENSMAUG00000008417	Smarcad1	100	62.394	Mesocricetus_auratus
ENSPREG00000018185	smarcad1a	94	62.136	ENSMICG00000009746	SMARCAD1	95	66.563	Microcebus_murinus
ENSPREG00000018185	smarcad1a	84	66.927	ENSMOCG00000017142	Smarcad1	94	66.927	Microtus_ochrogaster
ENSPREG00000018185	smarcad1a	80	83.994	ENSMMOG00000000275	smarcad1a	99	83.308	Mola_mola
ENSPREG00000018185	smarcad1a	96	66.771	ENSMODG00000019268	SMARCAD1	78	66.771	Monodelphis_domestica
ENSPREG00000018185	smarcad1a	87	61.636	MGP_CAROLIEiJ_G0028458	-	68	62.143	Mus_caroli
ENSPREG00000018185	smarcad1a	83	66.615	ENSMUSG00000029920	Smarcad1	76	66.615	Mus_musculus
ENSPREG00000018185	smarcad1a	83	66.615	MGP_PahariEiJ_G0022198	Smarcad1	91	66.615	Mus_pahari
ENSPREG00000018185	smarcad1a	83	66.615	MGP_SPRETEiJ_G0029462	Smarcad1	91	66.615	Mus_spretus
ENSPREG00000018185	smarcad1a	94	62.587	ENSMPUG00000002111	SMARCAD1	95	67.083	Mustela_putorius_furo
ENSPREG00000018185	smarcad1a	100	61.528	ENSMLUG00000000425	SMARCAD1	79	66.719	Myotis_lucifugus
ENSPREG00000018185	smarcad1a	100	61.196	ENSNGAG00000000810	Smarcad1	99	62.108	Nannospalax_galili
ENSPREG00000018185	smarcad1a	70	82.945	ENSNBRG00000012749	smarcad1a	97	75.398	Neolamprologus_brichardi
ENSPREG00000018185	smarcad1a	94	62.587	ENSNLEG00000014225	SMARCAD1	99	67.508	Nomascus_leucogenys
ENSPREG00000018185	smarcad1a	94	61.295	ENSODEG00000004334	SMARCAD1	99	63.650	Octodon_degus
ENSPREG00000018185	smarcad1a	84	85.179	ENSONIG00000015059	smarcad1a	100	80.730	Oreochromis_niloticus
ENSPREG00000018185	smarcad1a	77	67.030	ENSOANG00000013764	SMARCAD1	97	67.030	Ornithorhynchus_anatinus
ENSPREG00000018185	smarcad1a	94	62.170	ENSOCUG00000017283	SMARCAD1	95	66.927	Oryctolagus_cuniculus
ENSPREG00000018185	smarcad1a	100	69.840	ENSORLG00000004869	smarcad1a	100	69.746	Oryzias_latipes
ENSPREG00000018185	smarcad1a	100	70.028	ENSORLG00020020569	smarcad1a	100	69.840	Oryzias_latipes_hni
ENSPREG00000018185	smarcad1a	100	69.557	ENSORLG00015009045	smarcad1a	100	69.463	Oryzias_latipes_hsok
ENSPREG00000018185	smarcad1a	99	69.500	ENSOMEG00000023032	smarcad1a	100	69.594	Oryzias_melastigma
ENSPREG00000018185	smarcad1a	94	61.859	ENSOGAG00000011444	SMARCAD1	95	66.252	Otolemur_garnettii
ENSPREG00000018185	smarcad1a	94	62.448	ENSOARG00000017851	SMARCAD1	95	67.083	Ovis_aries
ENSPREG00000018185	smarcad1a	94	62.587	ENSPPAG00000035715	SMARCAD1	100	63.714	Pan_paniscus
ENSPREG00000018185	smarcad1a	94	62.865	ENSPPRG00000024756	SMARCAD1	99	67.677	Panthera_pardus
ENSPREG00000018185	smarcad1a	94	62.691	ENSPTIG00000017868	SMARCAD1	95	67.030	Panthera_tigris_altaica
ENSPREG00000018185	smarcad1a	94	62.587	ENSPTRG00000023126	SMARCAD1	99	67.508	Pan_troglodytes
ENSPREG00000018185	smarcad1a	94	61.219	ENSPANG00000019757	SMARCAD1	99	63.349	Papio_anubis
ENSPREG00000018185	smarcad1a	98	61.373	ENSPSIG00000010255	SMARCAD1	74	67.601	Pelodiscus_sinensis
ENSPREG00000018185	smarcad1a	65	78.315	ENSPMGG00000010735	smarcad1a	98	75.036	Periophthalmus_magnuspinnatus
ENSPREG00000018185	smarcad1a	100	53.022	ENSPEMG00000001854	Smarcad1	100	54.208	Peromyscus_maniculatus_bairdii
ENSPREG00000018185	smarcad1a	90	54.707	ENSPMAG00000003516	smarcad1a	97	55.446	Petromyzon_marinus
ENSPREG00000018185	smarcad1a	81	62.448	ENSPCIG00000008137	SMARCAD1	94	64.766	Phascolarctos_cinereus
ENSPREG00000018185	smarcad1a	100	96.520	ENSPFOG00000019116	smarcad1a	100	96.520	Poecilia_formosa
ENSPREG00000018185	smarcad1a	100	96.612	ENSPLAG00000000108	smarcad1a	100	96.612	Poecilia_latipinna
ENSPREG00000018185	smarcad1a	100	96.612	ENSPMEG00000009155	smarcad1a	100	96.612	Poecilia_mexicana
ENSPREG00000018185	smarcad1a	94	62.136	ENSPPYG00000014935	SMARCAD1	100	63.248	Pongo_abelii
ENSPREG00000018185	smarcad1a	72	53.686	ENSPCOG00000020478	SMARCAD1	71	57.098	Propithecus_coquereli
ENSPREG00000018185	smarcad1a	94	61.367	ENSPVAG00000001760	SMARCAD1	95	65.884	Pteropus_vampyrus
ENSPREG00000018185	smarcad1a	70	82.081	ENSPNYG00000010087	smarcad1a	97	74.693	Pundamilia_nyererei
ENSPREG00000018185	smarcad1a	96	66.106	ENSPNAG00000001663	smarcad1a	96	72.012	Pygocentrus_nattereri
ENSPREG00000018185	smarcad1a	81	70.554	ENSPNAG00000010099	smarcad1b	91	70.349	Pygocentrus_nattereri
ENSPREG00000018185	smarcad1a	83	66.927	ENSRNOG00000006391	Smarcad1	92	66.927	Rattus_norvegicus
ENSPREG00000018185	smarcad1a	94	62.587	ENSRBIG00000041989	SMARCAD1	100	63.714	Rhinopithecus_bieti
ENSPREG00000018185	smarcad1a	94	62.587	ENSRROG00000035309	SMARCAD1	100	63.714	Rhinopithecus_roxellana
ENSPREG00000018185	smarcad1a	94	62.726	ENSSBOG00000032114	SMARCAD1	99	67.677	Saimiri_boliviensis_boliviensis
ENSPREG00000018185	smarcad1a	91	62.311	ENSSHAG00000001279	SMARCAD1	75	67.083	Sarcophilus_harrisii
ENSPREG00000018185	smarcad1a	69	72.093	ENSSFOG00015020909	smarcad1a	91	72.093	Scleropages_formosus
ENSPREG00000018185	smarcad1a	88	74.240	ENSSFOG00015016814	smarcad1b	95	74.240	Scleropages_formosus
ENSPREG00000018185	smarcad1a	100	72.643	ENSSMAG00000001326	smarcad1a	100	73.401	Scophthalmus_maximus
ENSPREG00000018185	smarcad1a	82	77.312	ENSSDUG00000022338	smarcad1a	98	76.792	Seriola_dumerili
ENSPREG00000018185	smarcad1a	100	74.015	ENSSLDG00000024986	smarcad1a	100	74.133	Seriola_lalandi_dorsalis
ENSPREG00000018185	smarcad1a	60	67.563	ENSSPUG00000004633	SMARCAD1	99	67.563	Sphenodon_punctatus
ENSPREG00000018185	smarcad1a	100	75.023	ENSSPAG00000001970	smarcad1a	100	76.244	Stegastes_partitus
ENSPREG00000018185	smarcad1a	94	62.587	ENSSSCG00000009193	SMARCAD1	99	63.925	Sus_scrofa
ENSPREG00000018185	smarcad1a	70	67.757	ENSTGUG00000003127	SMARCAD1	100	64.317	Taeniopygia_guttata
ENSPREG00000018185	smarcad1a	91	80.872	ENSTNIG00000017585	smarcad1a	99	81.831	Tetraodon_nigroviridis
ENSPREG00000018185	smarcad1a	74	69.643	ENSTBEG00000002789	SMARCAD1	59	69.643	Tupaia_belangeri
ENSPREG00000018185	smarcad1a	92	62.222	ENSTTRG00000000226	SMARCAD1	81	66.667	Tursiops_truncatus
ENSPREG00000018185	smarcad1a	94	62.587	ENSUAMG00000022262	SMARCAD1	95	67.083	Ursus_americanus
ENSPREG00000018185	smarcad1a	94	62.587	ENSUMAG00000004549	SMARCAD1	95	67.083	Ursus_maritimus
ENSPREG00000018185	smarcad1a	94	61.951	ENSVVUG00000007271	SMARCAD1	99	63.744	Vulpes_vulpes
ENSPREG00000018185	smarcad1a	89	55.972	ENSXETG00000019214	smarcad1	100	58.069	Xenopus_tropicalis
ENSPREG00000018185	smarcad1a	80	95.936	ENSXCOG00000005232	smarcad1a	88	97.173	Xiphophorus_couchianus
ENSPREG00000018185	smarcad1a	100	94.500	ENSXMAG00000015350	smarcad1a	100	94.500	Xiphophorus_maculatus