EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPREG00000018221 (Gene tree)
Gene ID
103472662
Gene Symbol
-
Alias
-
Full Name
RNA-binding motif%2C single-stranded-interacting protein 3
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Minus strand
Length
329120 bases
Position
chrLG11:20128987-20458106
Accession
103472662
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000027010RRM_1PF00076.228.2e-3212
ENSPREP00000027010RRM_1PF00076.228.2e-3222
ENSPREP00000026984RRM_1PF00076.225.4e-3112
ENSPREP00000026984RRM_1PF00076.225.4e-3122
ENSPREP00000026963RRM_1PF00076.225.6e-3112
ENSPREP00000026963RRM_1PF00076.225.6e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000027266-1474-ENSPREP00000026984487 (aa)--
ENSPRET00000027291-786-ENSPREP00000027010261 (aa)--
ENSPRET00000027243-1596XM_008422423ENSPREP00000026963531 (aa)XP_008420645-
Gene Model
Click here to download ENSPREG00000018221's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000018221's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPREG00000018221-6638.961ENSPREG00000022185-5339.474
ENSPREG00000018221-7668.687ENSPREG00000020161rbms1a8560.486
ENSPREG00000018221-6433.750ENSPREG00000018923celf3a5633.750
ENSPREG00000018221-6235.000ENSPREG00000005911si:dkey-205h23.25735.000
ENSPREG00000018221-7338.119ENSPREG00000017160ELAVL26437.629
ENSPREG00000018221-9065.354ENSPREG00000020560rbms2b8568.235
ENSPREG00000018221-9783.594ENSPREG00000011880rbms39284.636
ENSPREG00000018221-6032.632ENSPREG00000010911pabpc1b6232.632
ENSPREG00000018221-6236.250ENSPREG00000021231celf46736.250
ENSPREG00000018221-6340.260ENSPREG00000018002-5240.789
ENSPREG00000018221-6634.973ENSPREG00000011054elavl1a5134.973
ENSPREG00000018221-7837.097ENSPREG00000005877-8437.097
ENSPREG00000018221-7335.519ENSPREG00000006971elavl37135.106
ENSPREG00000018221-7487.629ENSPREG00000015038rbms2a7683.004
ENSPREG00000018221-8032.632ENSPREG00000019595pabpc1a6832.632
ENSPREG00000018221-6540.789ENSPREG00000007795-5440.789
ENSPREG00000018221-6737.158ENSPREG00000018937elavl46236.872
ENSPREG00000018221-6035.417ENSPREG00000015886pabpc1l9135.789
ENSPREG00000018221-7780.597ENSPREG00000008146RBMS18966.842
ENSPREG00000018221-6233.750ENSPREG00000017378celf3b6133.750
ENSPREG00000018221-8436.250ENSPREG00000008235celf5a5036.250
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000018221-9886.973ENSG00000144642RBMS39986.973Homo_sapiens
ENSPREG00000018221-9780.077ENSAPOG00000007266rbms38086.787Acanthochromis_polyacanthus
ENSPREG00000018221-9797.222ENSAPOG00000003432-9797.277Acanthochromis_polyacanthus
ENSPREG00000018221-5484.211ENSAMEG00000005947RBMS39984.211Ailuropoda_melanoleuca
ENSPREG00000018221-8476.233ENSACIG00000021113RBMS39574.590Amphilophus_citrinellus
ENSPREG00000018221-8196.682ENSACIG00000006987-8798.750Amphilophus_citrinellus
ENSPREG00000018221-9784.351ENSAOCG00000021274rbms38784.140Amphiprion_ocellaris
ENSPREG00000018221-94100.000ENSAOCG00000024104-10089.885Amphiprion_ocellaris
ENSPREG00000018221-8483.333ENSAPEG00000016299rbms38786.787Amphiprion_percula
ENSPREG00000018221-94100.000ENSAPEG00000009481-9090.691Amphiprion_percula
ENSPREG00000018221-9797.222ENSATEG00000008433-9797.030Anabas_testudineus
ENSPREG00000018221-9785.000ENSATEG00000024295rbms38784.677Anabas_testudineus
ENSPREG00000018221-9887.692ENSAPLG00000012270RBMS38986.945Anas_platyrhynchos
ENSPREG00000018221-9887.692ENSACAG00000028664RBMS38888.770Anolis_carolinensis
ENSPREG00000018221-9886.973ENSANAG00000021899RBMS38886.563Aotus_nancymaae
ENSPREG00000018221-9784.556ENSACLG00000018506rbms39583.871Astatotilapia_calliptera
ENSPREG00000018221-94100.000ENSACLG00000008976-10089.225Astatotilapia_calliptera
ENSPREG00000018221-9791.270ENSAMXG00000020388rbms38989.840Astyanax_mexicanus
ENSPREG00000018221-9785.714ENSAMXG00000043770-9885.714Astyanax_mexicanus
ENSPREG00000018221-9886.973ENSBTAG00000044062RBMS39685.897Bos_taurus
ENSPREG00000018221-9886.973ENSCJAG00000004312RBMS38886.305Callithrix_jacchus
ENSPREG00000018221-9886.973ENSCAFG00000005464RBMS38885.897Canis_familiaris
ENSPREG00000018221-9886.973ENSCAFG00020024980RBMS38985.897Canis_lupus_dingo
ENSPREG00000018221-9886.973ENSCHIG00000009144RBMS38889.037Capra_hircus
ENSPREG00000018221-5694.521ENSTSYG00000002615RBMS39985.801Carlito_syrichta
ENSPREG00000018221-7495.855ENSCAPG00000017783RBMS39582.888Cavia_aperea
ENSPREG00000018221-9888.281ENSCPOG00000006457RBMS38989.067Cavia_porcellus
ENSPREG00000018221-9886.973ENSCCAG00000008671RBMS38886.305Cebus_capucinus
ENSPREG00000018221-9886.973ENSCATG00000013222RBMS38985.897Cercocebus_atys
ENSPREG00000018221-9886.973ENSCLAG00000005866RBMS38889.037Chinchilla_lanigera
ENSPREG00000018221-5187.823ENSCSAG00000009655RBMS39987.823Chlorocebus_sabaeus
ENSPREG00000018221-7889.326ENSCHOG00000000758RBMS38085.593Choloepus_hoffmanni
ENSPREG00000018221-9887.692ENSCPBG00000022678RBMS38791.317Chrysemys_picta_bellii
ENSPREG00000018221-9886.973ENSCANG00000032137RBMS38886.047Colobus_angolensis_palliatus
ENSPREG00000018221-9888.281ENSCGRG00001007243Rbms38986.667Cricetulus_griseus_chok1gshd
ENSPREG00000018221-9888.281ENSCGRG00000004599Rbms38986.667Cricetulus_griseus_crigri
ENSPREG00000018221-9784.674ENSCSEG00000010011RBMS39084.282Cynoglossus_semilaevis
ENSPREG00000018221-9797.222ENSCSEG00000014677-94100.000Cynoglossus_semilaevis
ENSPREG00000018221-9786.328ENSCVAG00000022354rbms38784.824Cyprinodon_variegatus
ENSPREG00000018221-9796.825ENSCVAG00000022814-10099.738Cyprinodon_variegatus
ENSPREG00000018221-9792.063ENSDARG00000044574rbms39594.891Danio_rerio
ENSPREG00000018221-9887.356ENSDNOG00000016645RBMS38588.503Dasypus_novemcinctus
ENSPREG00000018221-9886.973ENSDORG00000007220Rbms38888.503Dipodomys_ordii
ENSPREG00000018221-7788.202ENSETEG00000009485-8070.571Echinops_telfairi
ENSPREG00000018221-5974.026ENSEBUG00000005830rbms38655.263Eptatretus_burgeri
ENSPREG00000018221-9886.973ENSEASG00005006152RBMS38889.037Equus_asinus_asinus
ENSPREG00000018221-9886.973ENSECAG00000017871RBMS38889.037Equus_caballus
ENSPREG00000018221-9876.245ENSEEUG00000014337RBMS38879.143Erinaceus_europaeus
ENSPREG00000018221-9783.846ENSELUG00000002862rbms39482.561Esox_lucius
ENSPREG00000018221-9795.238ENSELUG00000006905-9897.942Esox_lucius
ENSPREG00000018221-9886.973ENSFCAG00000002130RBMS38889.037Felis_catus
ENSPREG00000018221-9888.077ENSFALG00000009165RBMS38889.572Ficedula_albicollis
ENSPREG00000018221-9886.973ENSFDAG00000008278RBMS38888.503Fukomys_damarensis
ENSPREG00000018221-9073.444ENSFHEG00000004787RBMS39476.022Fundulus_heteroclitus
ENSPREG00000018221-8194.340ENSGMOG00000002600-9689.196Gadus_morhua
ENSPREG00000018221-9888.077ENSGALG00000011439RBMS38889.572Gallus_gallus
ENSPREG00000018221-9786.381ENSGAFG00000000168rbms39584.553Gambusia_affinis
ENSPREG00000018221-9797.110ENSGAFG00000003329-10097.110Gambusia_affinis
ENSPREG00000018221-5188.235ENSGAGG00000004039RBMS39988.235Gopherus_agassizii
ENSPREG00000018221-9886.973ENSGGOG00000007228RBMS38886.305Gorilla_gorilla
ENSPREG00000018221-9797.222ENSHBUG00000019785-10089.036Haplochromis_burtoni
ENSPREG00000018221-9784.556ENSHBUG00000021196rbms39184.556Haplochromis_burtoni
ENSPREG00000018221-9886.973ENSHGLG00000002170RBMS38889.037Heterocephalus_glaber_female
ENSPREG00000018221-9886.973ENSHGLG00100014278RBMS38889.037Heterocephalus_glaber_male
ENSPREG00000018221-9795.238ENSHCOG00000007894-9897.704Hippocampus_comes
ENSPREG00000018221-9791.667ENSIPUG00000017680rbms38989.840Ictalurus_punctatus
ENSPREG00000018221-9887.356ENSSTOG00000006324RBMS38889.572Ictidomys_tridecemlineatus
ENSPREG00000018221-9883.908ENSJJAG00000014708Rbms38886.933Jaculus_jaculus
ENSPREG00000018221-9783.650ENSKMAG00000020500rbms38683.514Kryptolebias_marmoratus
ENSPREG00000018221-9796.825ENSKMAG00000012586-9796.535Kryptolebias_marmoratus
ENSPREG00000018221-9797.959ENSLBEG00000027388-10097.959Labrus_bergylta
ENSPREG00000018221-9888.803ENSLACG00000010581RBMS38990.400Latimeria_chalumnae
ENSPREG00000018221-5492.069ENSLOCG00000002328rbms39992.069Lepisosteus_oculatus
ENSPREG00000018221-9886.973ENSLAFG00000000354RBMS38985.641Loxodonta_africana
ENSPREG00000018221-9886.973ENSMFAG00000033300RBMS38889.037Macaca_fascicularis
ENSPREG00000018221-9886.973ENSMMUG00000004404RBMS38889.037Macaca_mulatta
ENSPREG00000018221-9886.973ENSMNEG00000035839RBMS39685.385Macaca_nemestrina
ENSPREG00000018221-9886.973ENSMLEG00000029464RBMS38985.897Mandrillus_leucophaeus
ENSPREG00000018221-9784.674ENSMAMG00000024043rbms38785.523Mastacembelus_armatus
ENSPREG00000018221-9796.825ENSMAMG00000002176-9998.724Mastacembelus_armatus
ENSPREG00000018221-9784.556ENSMZEG00005006308rbms38783.871Maylandia_zebra
ENSPREG00000018221-9797.222ENSMZEG00005026469-10089.225Maylandia_zebra
ENSPREG00000018221-9888.281ENSMAUG00000016436Rbms38986.667Mesocricetus_auratus
ENSPREG00000018221-9886.973ENSMICG00000049249RBMS38886.305Microcebus_murinus
ENSPREG00000018221-9888.281ENSMOCG00000006997Rbms38986.400Microtus_ochrogaster
ENSPREG00000018221-9797.222ENSMMOG00000015071-9795.050Mola_mola
ENSPREG00000018221-8483.628ENSMMOG00000008471RBMS38987.576Mola_mola
ENSPREG00000018221-9882.264ENSMODG00000015125RBMS38685.641Monodelphis_domestica
ENSPREG00000018221-9796.825ENSMALG00000009155-9099.401Monopterus_albus
ENSPREG00000018221-9784.674ENSMALG00000019536RBMS38784.677Monopterus_albus
ENSPREG00000018221-9886.719MGP_CAROLIEiJ_G0032783Rbms310090.338Mus_caroli
ENSPREG00000018221-9887.891ENSMUSG00000039607Rbms310091.787Mus_musculus
ENSPREG00000018221-9887.891MGP_PahariEiJ_G0015650Rbms310091.787Mus_pahari
ENSPREG00000018221-9887.891MGP_SPRETEiJ_G0033930Rbms310091.787Mus_spretus
ENSPREG00000018221-9886.973ENSMPUG00000011956RBMS38985.897Mustela_putorius_furo
ENSPREG00000018221-9886.973ENSMLUG00000000659RBMS38889.305Myotis_lucifugus
ENSPREG00000018221-9888.281ENSNGAG00000014039Rbms38988.533Nannospalax_galili
ENSPREG00000018221-9797.222ENSNBRG00000018065-9098.404Neolamprologus_brichardi
ENSPREG00000018221-9886.973ENSNLEG00000004129RBMS38886.305Nomascus_leucogenys
ENSPREG00000018221-9875.954ENSMEUG00000004772RBMS39876.102Notamacropus_eugenii
ENSPREG00000018221-9886.973ENSOPRG00000006808RBMS37585.751Ochotona_princeps
ENSPREG00000018221-9887.356ENSODEG00000003651RBMS38889.305Octodon_degus
ENSPREG00000018221-9785.214ENSONIG00000007172rbms39083.871Oreochromis_niloticus
ENSPREG00000018221-9888.123ENSOANG00000010529RBMS38886.010Ornithorhynchus_anatinus
ENSPREG00000018221-9886.207ENSOCUG00000004840RBMS38885.128Oryctolagus_cuniculus
ENSPREG00000018221-9784.556ENSORLG00000005370RBMS38782.656Oryzias_latipes
ENSPREG00000018221-9797.222ENSORLG00000002306-9795.545Oryzias_latipes
ENSPREG00000018221-9784.556ENSORLG00020022674RBMS38688.152Oryzias_latipes_hni
ENSPREG00000018221-9797.222ENSORLG00020008496-9995.181Oryzias_latipes_hni
ENSPREG00000018221-9797.222ENSORLG00015015719-9795.792Oryzias_latipes_hsok
ENSPREG00000018221-9784.942ENSORLG00015005509rbms38688.152Oryzias_latipes_hsok
ENSPREG00000018221-9785.714ENSOMEG00000014805RBMS39582.796Oryzias_melastigma
ENSPREG00000018221-9785.135ENSOMEG00000007677-10097.650Oryzias_melastigma
ENSPREG00000018221-9886.973ENSOARG00000014684RBMS38884.872Ovis_aries
ENSPREG00000018221-9886.973ENSPPAG00000036519RBMS38886.305Pan_paniscus
ENSPREG00000018221-9886.590ENSPPRG00000002761RBMS38886.047Panthera_pardus
ENSPREG00000018221-9886.590ENSPTIG00000011568RBMS38889.037Panthera_tigris_altaica
ENSPREG00000018221-9886.973ENSPTRG00000014709RBMS38889.305Pan_troglodytes
ENSPREG00000018221-9886.973ENSPANG00000010234RBMS38985.897Papio_anubis
ENSPREG00000018221-9293.776ENSPKIG00000007989-9493.776Paramormyrops_kingsleyae
ENSPREG00000018221-8093.269ENSPKIG00000016025-7393.720Paramormyrops_kingsleyae
ENSPREG00000018221-9887.308ENSPSIG00000005269RBMS38888.770Pelodiscus_sinensis
ENSPREG00000018221-8484.375ENSPMGG00000021544rbms38685.886Periophthalmus_magnuspinnatus
ENSPREG00000018221-8698.661ENSPMGG00000021683-10098.691Periophthalmus_magnuspinnatus
ENSPREG00000018221-9391.770ENSPEMG00000001117Rbms38983.422Peromyscus_maniculatus_bairdii
ENSPREG00000018221-9886.260ENSPCIG00000006106RBMS38890.141Phascolarctos_cinereus
ENSPREG00000018221-9786.381ENSPFOG00000017887rbms38784.824Poecilia_formosa
ENSPREG00000018221-6087.261ENSPLAG00000016866-8281.620Poecilia_latipinna
ENSPREG00000018221-9798.266ENSPMEG00000002993-10098.266Poecilia_mexicana
ENSPREG00000018221-6087.261ENSPMEG00000012831-7290.184Poecilia_mexicana
ENSPREG00000018221-9865.134ENSPPYG00000014050RBMS37271.026Pongo_abelii
ENSPREG00000018221-9872.414ENSPCAG00000006307RBMS38864.359Procavia_capensis
ENSPREG00000018221-9886.973ENSPCOG00000017136RBMS38985.897Propithecus_coquereli
ENSPREG00000018221-8189.305ENSPVAG00000014037RBMS38285.399Pteropus_vampyrus
ENSPREG00000018221-9784.556ENSPNYG00000010546rbms38783.602Pundamilia_nyererei
ENSPREG00000018221-9797.222ENSPNYG00000012624-9796.535Pundamilia_nyererei
ENSPREG00000018221-9791.667ENSPNAG00000001800rbms38989.840Pygocentrus_nattereri
ENSPREG00000018221-7091.304ENSPNAG00000026763-7491.617Pygocentrus_nattereri
ENSPREG00000018221-9888.281ENSRNOG00000025881Rbms38986.400Rattus_norvegicus
ENSPREG00000018221-9886.973ENSRBIG00000035863RBMS38885.788Rhinopithecus_bieti
ENSPREG00000018221-7495.876ENSRROG00000027512RBMS39485.788Rhinopithecus_roxellana
ENSPREG00000018221-9886.973ENSSBOG00000020232RBMS38886.305Saimiri_boliviensis_boliviensis
ENSPREG00000018221-7989.855ENSSHAG00000002411RBMS39582.574Sarcophilus_harrisii
ENSPREG00000018221-9794.048ENSSFOG00015008578rbms39894.681Scleropages_formosus
ENSPREG00000018221-9781.298ENSSMAG00000004997rbms39983.060Scophthalmus_maximus
ENSPREG00000018221-9896.094ENSSMAG00000020065-9593.094Scophthalmus_maximus
ENSPREG00000018221-9784.291ENSSDUG00000013656RBMS38984.677Seriola_dumerili
ENSPREG00000018221-9797.222ENSSDUG00000019287-9797.277Seriola_dumerili
ENSPREG00000018221-9783.712ENSSLDG00000020276RBMS38684.946Seriola_lalandi_dorsalis
ENSPREG00000018221-9797.222ENSSLDG00000013224-9797.277Seriola_lalandi_dorsalis
ENSPREG00000018221-7892.118ENSSARG00000000695RBMS39473.714Sorex_araneus
ENSPREG00000018221-5487.031ENSSPUG00000017197RBMS39785.906Sphenodon_punctatus
ENSPREG00000018221-9797.222ENSSPAG00000003983-10090.133Stegastes_partitus
ENSPREG00000018221-9784.351ENSSPAG00000020693rbms39286.647Stegastes_partitus
ENSPREG00000018221-9886.973ENSSSCG00000036381RBMS38888.770Sus_scrofa
ENSPREG00000018221-6188.679ENSTGUG00000003572RBMS39985.758Taeniopygia_guttata
ENSPREG00000018221-9783.142ENSTRUG00000021719RBMS38682.656Takifugu_rubripes
ENSPREG00000018221-9778.824ENSTRUG00000007482-8993.629Takifugu_rubripes
ENSPREG00000018221-7990.338ENSTBEG00000005362RBMS39486.857Tupaia_belangeri
ENSPREG00000018221-9886.590ENSTTRG00000006202RBMS38984.872Tursiops_truncatus
ENSPREG00000018221-9886.973ENSUMAG00000000263RBMS38885.897Ursus_maritimus
ENSPREG00000018221-6092.994ENSVPAG00000003842RBMS39475.385Vicugna_pacos
ENSPREG00000018221-7595.385ENSVVUG00000004660RBMS39492.202Vulpes_vulpes
ENSPREG00000018221-5582.237ENSXETG00000032055RBMS39882.237Xenopus_tropicalis
ENSPREG00000018221-7284.021ENSXCOG00000019600-10084.021Xiphophorus_couchianus
ENSPREG00000018221-9783.333ENSXMAG00000021783rbms38784.553Xiphophorus_maculatus
ENSPREG00000018221-9797.495ENSXMAG00000014382-10097.495Xiphophorus_maculatus

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