EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000018280 (Gene tree)
Gene ID: 103472104
Gene Symbol: yars
Alias: TyrRS|cb204|wu:fk52b08
Full Name: tyrosyl-tRNA synthetase
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 4652 bases
Position: chrLG11:6742408-6747059
Accession: 103472104
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000027064	tRNA_bind	PF01588.20	4.4e-30	1	1
ENSPREP00000027064	tRNA-synt_1b	PF00579.25	6e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000027350	-	1581	XM_008421488	ENSPREP00000027064	526 (aa)	XP_008419710	-

Gene Model

Click here to download ENSPREG00000018280's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000018280's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000018280	yars	100	78.788	ENSG00000134684	YARS	100	78.598	Homo_sapiens
ENSPREG00000018280	yars	100	90.056	ENSAPOG00000020788	yars	100	89.306	Acanthochromis_polyacanthus
ENSPREG00000018280	yars	100	78.598	ENSAMEG00000007476	YARS	100	78.409	Ailuropoda_melanoleuca
ENSPREG00000018280	yars	100	90.684	ENSACIG00000017504	yars	100	90.114	Amphilophus_citrinellus
ENSPREG00000018280	yars	100	90.824	ENSAOCG00000009987	yars	100	90.075	Amphiprion_ocellaris
ENSPREG00000018280	yars	100	90.824	ENSAPEG00000001273	yars	100	90.075	Amphiprion_percula
ENSPREG00000018280	yars	100	88.577	ENSATEG00000005301	yars	100	88.951	Anabas_testudineus
ENSPREG00000018280	yars	98	72.340	ENSAPLG00000005739	YARS	98	72.340	Anas_platyrhynchos
ENSPREG00000018280	yars	99	77.230	ENSACAG00000003568	YARS	99	77.040	Anolis_carolinensis
ENSPREG00000018280	yars	100	79.167	ENSANAG00000034533	YARS	100	78.977	Aotus_nancymaae
ENSPREG00000018280	yars	100	90.304	ENSACLG00000004618	yars	100	90.304	Astatotilapia_calliptera
ENSPREG00000018280	yars	100	85.094	ENSAMXG00000010993	yars	100	85.094	Astyanax_mexicanus
ENSPREG00000018280	yars	100	78.598	ENSBTAG00000018065	YARS	100	78.409	Bos_taurus
ENSPREG00000018280	yars	100	78.977	ENSCJAG00000001037	YARS	100	78.788	Callithrix_jacchus
ENSPREG00000018280	yars	100	78.409	ENSCAFG00000010481	YARS	94	78.220	Canis_familiaris
ENSPREG00000018280	yars	100	78.261	ENSCAFG00020025379	YARS	100	78.072	Canis_lupus_dingo
ENSPREG00000018280	yars	100	78.977	ENSCHIG00000014340	YARS	100	78.788	Capra_hircus
ENSPREG00000018280	yars	100	78.788	ENSTSYG00000005019	YARS	100	78.598	Carlito_syrichta
ENSPREG00000018280	yars	90	56.688	ENSCAPG00000008627	YARS	100	56.688	Cavia_aperea
ENSPREG00000018280	yars	100	78.220	ENSCPOG00000009614	YARS	94	78.030	Cavia_porcellus
ENSPREG00000018280	yars	100	79.167	ENSCCAG00000036757	YARS	98	78.977	Cebus_capucinus
ENSPREG00000018280	yars	100	78.977	ENSCATG00000044394	YARS	100	78.788	Cercocebus_atys
ENSPREG00000018280	yars	100	78.030	ENSCLAG00000008977	YARS	93	77.841	Chinchilla_lanigera
ENSPREG00000018280	yars	100	78.788	ENSCSAG00000001062	YARS	100	78.598	Chlorocebus_sabaeus
ENSPREG00000018280	yars	96	68.762	ENSCHOG00000003939	YARS	100	68.566	Choloepus_hoffmanni
ENSPREG00000018280	yars	100	77.083	ENSCPBG00000010998	YARS	100	77.083	Chrysemys_picta_bellii
ENSPREG00000018280	yars	99	69.811	ENSCING00000005113	-	99	70.189	Ciona_intestinalis
ENSPREG00000018280	yars	99	65.458	ENSCSAVG00000003706	-	99	65.649	Ciona_savignyi
ENSPREG00000018280	yars	100	78.409	ENSCANG00000038285	YARS	100	78.220	Colobus_angolensis_palliatus
ENSPREG00000018280	yars	100	79.735	ENSCGRG00001010863	Yars	100	75.189	Cricetulus_griseus_chok1gshd
ENSPREG00000018280	yars	100	79.735	ENSCGRG00000007526	Yars	94	79.545	Cricetulus_griseus_crigri
ENSPREG00000018280	yars	100	88.847	ENSCSEG00000009643	yars	100	88.847	Cynoglossus_semilaevis
ENSPREG00000018280	yars	100	92.817	ENSCVAG00000016583	yars	100	92.628	Cyprinodon_variegatus
ENSPREG00000018280	yars	100	84.499	ENSDARG00000035913	yars	100	92.982	Danio_rerio
ENSPREG00000018280	yars	100	77.273	ENSDNOG00000000536	YARS	100	77.083	Dasypus_novemcinctus
ENSPREG00000018280	yars	100	78.598	ENSDORG00000011871	Yars	100	78.409	Dipodomys_ordii
ENSPREG00000018280	yars	99	65.909	FBgn0027080	TyrRS	99	66.031	Drosophila_melanogaster
ENSPREG00000018280	yars	87	85.714	ENSETEG00000000215	YARS	87	85.714	Echinops_telfairi
ENSPREG00000018280	yars	99	66.477	ENSEBUG00000004750	yars	100	66.163	Eptatretus_burgeri
ENSPREG00000018280	yars	99	78.394	ENSEASG00005011762	YARS	93	77.652	Equus_asinus_asinus
ENSPREG00000018280	yars	99	78.776	ENSECAG00000010015	YARS	68	78.030	Equus_caballus
ENSPREG00000018280	yars	88	61.053	ENSEEUG00000005992	-	72	71.572	Erinaceus_europaeus
ENSPREG00000018280	yars	100	86.174	ENSELUG00000017171	yars	100	85.985	Esox_lucius
ENSPREG00000018280	yars	91	82.812	ENSFCAG00000000704	YARS	100	89.035	Felis_catus
ENSPREG00000018280	yars	99	77.308	ENSFALG00000000592	YARS	93	77.395	Ficedula_albicollis
ENSPREG00000018280	yars	99	78.585	ENSFDAG00000006620	YARS	93	78.394	Fukomys_damarensis
ENSPREG00000018280	yars	100	92.481	ENSFHEG00000022444	yars	100	93.421	Fundulus_heteroclitus
ENSPREG00000018280	yars	96	82.643	ENSGMOG00000006555	yars	100	82.643	Gadus_morhua
ENSPREG00000018280	yars	99	78.119	ENSGALG00000003563	YARS	97	78.119	Gallus_gallus
ENSPREG00000018280	yars	100	88.136	ENSGACG00000008516	yars	100	87.947	Gasterosteus_aculeatus
ENSPREG00000018280	yars	100	77.652	ENSGAGG00000024290	YARS	100	77.652	Gopherus_agassizii
ENSPREG00000018280	yars	100	78.977	ENSGGOG00000014013	YARS	100	78.788	Gorilla_gorilla
ENSPREG00000018280	yars	100	88.785	ENSHBUG00000018909	yars	100	88.224	Haplochromis_burtoni
ENSPREG00000018280	yars	99	78.011	ENSHGLG00000013843	YARS	93	77.820	Heterocephalus_glaber_female
ENSPREG00000018280	yars	99	77.055	ENSHGLG00100002785	-	99	76.864	Heterocephalus_glaber_male
ENSPREG00000018280	yars	69	73.842	ENSHGLG00100020546	-	99	73.842	Heterocephalus_glaber_male
ENSPREG00000018280	yars	100	84.007	ENSHCOG00000006672	yars	100	83.456	Hippocampus_comes
ENSPREG00000018280	yars	99	80.989	ENSIPUG00000021749	yars	99	80.989	Ictalurus_punctatus
ENSPREG00000018280	yars	100	79.545	ENSSTOG00000012031	YARS	94	79.356	Ictidomys_tridecemlineatus
ENSPREG00000018280	yars	100	77.652	ENSJJAG00000013281	Yars	93	77.462	Jaculus_jaculus
ENSPREG00000018280	yars	100	90.226	ENSKMAG00000021752	yars	100	90.226	Kryptolebias_marmoratus
ENSPREG00000018280	yars	100	89.159	ENSLBEG00000024080	yars	100	88.411	Labrus_bergylta
ENSPREG00000018280	yars	100	76.515	ENSLACG00000015577	YARS	100	76.515	Latimeria_chalumnae
ENSPREG00000018280	yars	99	81.784	ENSLOCG00000002165	yars	99	81.784	Lepisosteus_oculatus
ENSPREG00000018280	yars	100	78.220	ENSLAFG00000003786	YARS	96	78.030	Loxodonta_africana
ENSPREG00000018280	yars	100	73.864	ENSMFAG00000040933	YARS	100	73.674	Macaca_fascicularis
ENSPREG00000018280	yars	100	78.977	ENSMMUG00000019746	YARS	100	78.788	Macaca_mulatta
ENSPREG00000018280	yars	100	72.097	ENSMNEG00000031865	YARS	100	72.590	Macaca_nemestrina
ENSPREG00000018280	yars	100	78.977	ENSMLEG00000041315	YARS	100	78.788	Mandrillus_leucophaeus
ENSPREG00000018280	yars	100	90.226	ENSMAMG00000006092	yars	100	90.226	Mastacembelus_armatus
ENSPREG00000018280	yars	100	88.931	ENSMZEG00005011426	yars	100	88.368	Maylandia_zebra
ENSPREG00000018280	yars	99	75.717	ENSMGAG00000005063	YARS	100	75.475	Meleagris_gallopavo
ENSPREG00000018280	yars	97	79.337	ENSMAUG00000021126	Yars	99	79.142	Mesocricetus_auratus
ENSPREG00000018280	yars	100	79.545	ENSMICG00000011204	YARS	100	79.356	Microcebus_murinus
ENSPREG00000018280	yars	100	78.977	ENSMOCG00000011342	Yars	94	78.788	Microtus_ochrogaster
ENSPREG00000018280	yars	100	85.171	ENSMMOG00000021133	yars	100	85.171	Mola_mola
ENSPREG00000018280	yars	100	76.894	ENSMODG00000017404	YARS	100	76.705	Monodelphis_domestica
ENSPREG00000018280	yars	63	91.317	ENSMALG00000003648	yars	92	91.317	Monopterus_albus
ENSPREG00000018280	yars	100	78.977	MGP_CAROLIEiJ_G0026513	Yars	94	78.788	Mus_caroli
ENSPREG00000018280	yars	100	79.167	ENSMUSG00000028811	Yars	94	78.977	Mus_musculus
ENSPREG00000018280	yars	100	78.220	MGP_PahariEiJ_G0028844	Yars	94	78.030	Mus_pahari
ENSPREG00000018280	yars	100	78.788	MGP_SPRETEiJ_G0027493	Yars	94	78.598	Mus_spretus
ENSPREG00000018280	yars	100	79.167	ENSMLUG00000000759	YARS	100	78.977	Myotis_lucifugus
ENSPREG00000018280	yars	97	79.648	ENSNGAG00000001419	Yars	100	79.568	Nannospalax_galili
ENSPREG00000018280	yars	100	90.875	ENSNBRG00000020413	yars	100	90.875	Neolamprologus_brichardi
ENSPREG00000018280	yars	100	78.598	ENSNLEG00000002922	YARS	100	78.409	Nomascus_leucogenys
ENSPREG00000018280	yars	75	81.176	ENSMEUG00000011824	-	75	81.176	Notamacropus_eugenii
ENSPREG00000018280	yars	100	73.674	ENSOPRG00000003669	YARS	100	73.485	Ochotona_princeps
ENSPREG00000018280	yars	100	78.220	ENSODEG00000005363	YARS	94	78.030	Octodon_degus
ENSPREG00000018280	yars	100	89.720	ENSONIG00000015400	yars	100	88.972	Oreochromis_niloticus
ENSPREG00000018280	yars	93	73.185	ENSOANG00000011779	YARS	100	73.185	Ornithorhynchus_anatinus
ENSPREG00000018280	yars	100	79.167	ENSOCUG00000010007	YARS	100	78.977	Oryctolagus_cuniculus
ENSPREG00000018280	yars	98	90.286	ENSORLG00000013982	yars	96	89.333	Oryzias_latipes
ENSPREG00000018280	yars	100	89.831	ENSORLG00020020750	yars	100	90.207	Oryzias_latipes_hni
ENSPREG00000018280	yars	100	90.056	ENSORLG00015008963	yars	100	90.432	Oryzias_latipes_hsok
ENSPREG00000018280	yars	100	91.353	ENSOMEG00000013016	yars	95	96.154	Oryzias_melastigma
ENSPREG00000018280	yars	100	78.409	ENSOGAG00000007359	YARS	100	78.220	Otolemur_garnettii
ENSPREG00000018280	yars	100	78.409	ENSOARG00000020897	YARS	93	78.220	Ovis_aries
ENSPREG00000018280	yars	100	78.977	ENSPPAG00000035791	YARS	98	79.256	Pan_paniscus
ENSPREG00000018280	yars	100	78.598	ENSPPRG00000023768	YARS	100	78.409	Panthera_pardus
ENSPREG00000018280	yars	100	78.598	ENSPTIG00000003438	YARS	100	78.409	Panthera_tigris_altaica
ENSPREG00000018280	yars	100	78.977	ENSPTRG00000000491	YARS	100	78.788	Pan_troglodytes
ENSPREG00000018280	yars	100	78.977	ENSPANG00000009804	YARS	100	78.788	Papio_anubis
ENSPREG00000018280	yars	100	82.576	ENSPKIG00000024596	yars	100	82.576	Paramormyrops_kingsleyae
ENSPREG00000018280	yars	100	67.045	ENSPSIG00000006945	YARS	100	67.045	Pelodiscus_sinensis
ENSPREG00000018280	yars	100	90.494	ENSPMGG00000022917	yars	100	90.114	Periophthalmus_magnuspinnatus
ENSPREG00000018280	yars	100	79.167	ENSPEMG00000010746	Yars	94	78.977	Peromyscus_maniculatus_bairdii
ENSPREG00000018280	yars	99	77.799	ENSPCIG00000022457	YARS	99	77.799	Phascolarctos_cinereus
ENSPREG00000018280	yars	100	97.556	ENSPFOG00000014808	yars	100	97.556	Poecilia_formosa
ENSPREG00000018280	yars	100	97.932	ENSPLAG00000020075	yars	100	97.932	Poecilia_latipinna
ENSPREG00000018280	yars	100	97.744	ENSPMEG00000002803	yars	100	97.744	Poecilia_mexicana
ENSPREG00000018280	yars	100	77.024	ENSPPYG00000001585	YARS	100	76.836	Pongo_abelii
ENSPREG00000018280	yars	76	76.060	ENSPCAG00000011170	YARS	76	75.810	Procavia_capensis
ENSPREG00000018280	yars	100	79.167	ENSPCOG00000021026	YARS	100	79.167	Propithecus_coquereli
ENSPREG00000018280	yars	100	79.167	ENSPVAG00000010984	YARS	100	78.977	Pteropus_vampyrus
ENSPREG00000018280	yars	100	90.494	ENSPNYG00000000860	yars	100	90.494	Pundamilia_nyererei
ENSPREG00000018280	yars	100	84.121	ENSPNAG00000009622	yars	100	84.121	Pygocentrus_nattereri
ENSPREG00000018280	yars	100	79.356	ENSRNOG00000007213	Yars	94	79.167	Rattus_norvegicus
ENSPREG00000018280	yars	55	66.319	ENSRBIG00000044271	-	85	66.901	Rhinopithecus_bieti
ENSPREG00000018280	yars	100	78.788	ENSRROG00000039913	YARS	100	78.598	Rhinopithecus_roxellana
ENSPREG00000018280	yars	100	78.598	ENSSBOG00000030205	YARS	100	78.516	Saimiri_boliviensis_boliviensis
ENSPREG00000018280	yars	100	77.273	ENSSHAG00000011851	YARS	100	77.083	Sarcophilus_harrisii
ENSPREG00000018280	yars	100	82.576	ENSSFOG00015007179	yars	100	82.386	Scleropages_formosus
ENSPREG00000018280	yars	100	86.882	ENSSMAG00000020736	yars	100	86.692	Scophthalmus_maximus
ENSPREG00000018280	yars	100	90.755	ENSSDUG00000001782	yars	100	90.755	Seriola_dumerili
ENSPREG00000018280	yars	100	91.098	ENSSLDG00000008268	yars	100	90.909	Seriola_lalandi_dorsalis
ENSPREG00000018280	yars	84	73.162	ENSSARG00000012227	-	83	73.162	Sorex_araneus
ENSPREG00000018280	yars	100	78.220	ENSSPUG00000000333	YARS	100	78.030	Sphenodon_punctatus
ENSPREG00000018280	yars	100	89.139	ENSSPAG00000020632	yars	100	86.174	Stegastes_partitus
ENSPREG00000018280	yars	100	79.356	ENSSSCG00000030369	YARS	100	79.167	Sus_scrofa
ENSPREG00000018280	yars	99	77.159	ENSTGUG00000001342	YARS	99	77.351	Taeniopygia_guttata
ENSPREG00000018280	yars	99	87.476	ENSTRUG00000014099	yars	99	87.097	Takifugu_rubripes
ENSPREG00000018280	yars	99	86.667	ENSTNIG00000009237	yars	99	86.286	Tetraodon_nigroviridis
ENSPREG00000018280	yars	96	71.316	ENSTBEG00000014374	YARS	100	71.316	Tupaia_belangeri
ENSPREG00000018280	yars	100	78.977	ENSTTRG00000014987	YARS	100	78.788	Tursiops_truncatus
ENSPREG00000018280	yars	100	75.758	ENSUAMG00000000392	YARS	100	73.954	Ursus_americanus
ENSPREG00000018280	yars	100	70.865	ENSUMAG00000008312	YARS	93	70.865	Ursus_maritimus
ENSPREG00000018280	yars	100	68.998	ENSVPAG00000010958	YARS	100	68.998	Vicugna_pacos
ENSPREG00000018280	yars	100	78.409	ENSVVUG00000015468	YARS	99	78.669	Vulpes_vulpes
ENSPREG00000018280	yars	100	74.242	ENSXETG00000027865	yars	100	74.242	Xenopus_tropicalis
ENSPREG00000018280	yars	94	95.626	ENSXMAG00000016348	yars	82	95.626	Xiphophorus_maculatus