EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000018467 (Gene tree)
Gene ID: 103459793
Gene Symbol: rtcb
Alias: -
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 3436 bases
Position: chrKK215283.1:969973-973408
Accession: 103459793
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000027329	RtcB	PF01139.17	3.8e-147	1	1
ENSPREP00000027353	RtcB	PF01139.17	1.6e-123	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000027619	-	1518	XM_008401654	ENSPREP00000027329	505 (aa)	XP_008399876	UPI0004A466D0
ENSPRET00000027644	-	1440	-	ENSPREP00000027353	479 (aa)	-	-

Gene Model

Click here to download ENSPREG00000018467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000018467's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000018467	rtcb	100	94.851	ENSG00000100220	RTCB	100	94.851	Homo_sapiens
ENSPREG00000018467	rtcb	100	97.426	ENSAPOG00000006040	rtcb	100	97.426	Acanthochromis_polyacanthus
ENSPREG00000018467	rtcb	100	94.851	ENSAMEG00000016152	RTCB	100	94.851	Ailuropoda_melanoleuca
ENSPREG00000018467	rtcb	100	92.673	ENSACIG00000009083	rtcb	100	92.673	Amphilophus_citrinellus
ENSPREG00000018467	rtcb	100	97.426	ENSAOCG00000005662	rtcb	100	98.696	Amphiprion_ocellaris
ENSPREG00000018467	rtcb	96	93.018	ENSAPEG00000024653	rtcb	100	93.018	Amphiprion_percula
ENSPREG00000018467	rtcb	100	97.426	ENSAPEG00000024701	rtcb	100	97.426	Amphiprion_percula
ENSPREG00000018467	rtcb	100	97.030	ENSATEG00000000618	rtcb	100	97.030	Anabas_testudineus
ENSPREG00000018467	rtcb	100	91.522	ENSACAG00000014817	RTCB	100	91.522	Anolis_carolinensis
ENSPREG00000018467	rtcb	72	97.222	ENSANAG00000023724	-	84	97.222	Aotus_nancymaae
ENSPREG00000018467	rtcb	100	80.792	ENSANAG00000018191	-	91	80.792	Aotus_nancymaae
ENSPREG00000018467	rtcb	100	96.040	ENSACLG00000008367	rtcb	100	96.739	Astatotilapia_calliptera
ENSPREG00000018467	rtcb	100	95.248	ENSAMXG00000042320	rtcb	100	95.248	Astyanax_mexicanus
ENSPREG00000018467	rtcb	100	95.050	ENSBTAG00000011070	RTCB	100	95.050	Bos_taurus
ENSPREG00000018467	rtcb	100	75.050	WBGene00008877	rtcb-1	100	75.050	Caenorhabditis_elegans
ENSPREG00000018467	rtcb	100	94.851	ENSCJAG00000006128	RTCB	100	94.851	Callithrix_jacchus
ENSPREG00000018467	rtcb	100	94.851	ENSCAFG00000001785	RTCB	100	94.851	Canis_familiaris
ENSPREG00000018467	rtcb	100	90.693	ENSCAFG00000010789	-	100	90.693	Canis_familiaris
ENSPREG00000018467	rtcb	100	94.851	ENSCAFG00020004890	-	100	94.851	Canis_lupus_dingo
ENSPREG00000018467	rtcb	87	90.682	ENSCAFG00020018953	-	99	90.682	Canis_lupus_dingo
ENSPREG00000018467	rtcb	100	95.050	ENSCHIG00000027009	-	100	95.050	Capra_hircus
ENSPREG00000018467	rtcb	100	94.653	ENSTSYG00000012320	RTCB	100	94.653	Carlito_syrichta
ENSPREG00000018467	rtcb	94	94.969	ENSCAPG00000011647	RTCB	96	94.969	Cavia_aperea
ENSPREG00000018467	rtcb	100	94.851	ENSCCAG00000000618	RTCB	100	94.851	Cebus_capucinus
ENSPREG00000018467	rtcb	100	94.653	ENSCATG00000033424	RTCB	100	94.653	Cercocebus_atys
ENSPREG00000018467	rtcb	100	94.851	ENSCLAG00000007997	RTCB	100	94.851	Chinchilla_lanigera
ENSPREG00000018467	rtcb	100	94.653	ENSCSAG00000008351	RTCB	100	94.653	Chlorocebus_sabaeus
ENSPREG00000018467	rtcb	100	81.188	ENSCHOG00000009123	RTCB	100	81.188	Choloepus_hoffmanni
ENSPREG00000018467	rtcb	100	93.663	ENSCPBG00000023184	RTCB	100	93.663	Chrysemys_picta_bellii
ENSPREG00000018467	rtcb	100	83.168	ENSCING00000003830	-	100	83.168	Ciona_intestinalis
ENSPREG00000018467	rtcb	100	83.366	ENSCSAVG00000008124	-	99	83.366	Ciona_savignyi
ENSPREG00000018467	rtcb	100	90.891	ENSCANG00000001891	RTCB	100	90.891	Colobus_angolensis_palliatus
ENSPREG00000018467	rtcb	100	94.455	ENSCGRG00001011173	Rtcb	100	94.455	Cricetulus_griseus_chok1gshd
ENSPREG00000018467	rtcb	93	95.541	ENSCGRG00000009587	-	96	95.541	Cricetulus_griseus_crigri
ENSPREG00000018467	rtcb	100	96.238	ENSCSEG00000003986	rtcb	100	96.238	Cynoglossus_semilaevis
ENSPREG00000018467	rtcb	82	97.356	ENSCVAG00000000569	rtcb	95	97.356	Cyprinodon_variegatus
ENSPREG00000018467	rtcb	100	95.842	ENSDARG00000101047	rtcb	100	95.842	Danio_rerio
ENSPREG00000018467	rtcb	80	90.909	ENSDNOG00000012425	RTCB	99	90.909	Dasypus_novemcinctus
ENSPREG00000018467	rtcb	100	94.455	ENSDORG00000010855	Rtcb	100	94.455	Dipodomys_ordii
ENSPREG00000018467	rtcb	99	85.288	FBgn0032781	RtcB	99	85.288	Drosophila_melanogaster
ENSPREG00000018467	rtcb	100	88.911	ENSETEG00000001988	RTCB	100	88.911	Echinops_telfairi
ENSPREG00000018467	rtcb	100	86.139	ENSEBUG00000014235	rtcb	100	86.139	Eptatretus_burgeri
ENSPREG00000018467	rtcb	100	94.653	ENSEASG00005019059	RTCB	100	94.653	Equus_asinus_asinus
ENSPREG00000018467	rtcb	100	94.653	ENSECAG00000023998	RTCB	100	94.653	Equus_caballus
ENSPREG00000018467	rtcb	89	86.130	ENSEEUG00000006251	RTCB	100	86.130	Erinaceus_europaeus
ENSPREG00000018467	rtcb	100	82.798	ENSELUG00000009275	rtcb	100	82.798	Esox_lucius
ENSPREG00000018467	rtcb	100	94.851	ENSFCAG00000026480	RTCB	100	94.851	Felis_catus
ENSPREG00000018467	rtcb	100	94.455	ENSFALG00000013334	RTCB	100	94.455	Ficedula_albicollis
ENSPREG00000018467	rtcb	100	94.653	ENSFDAG00000018150	RTCB	100	94.653	Fukomys_damarensis
ENSPREG00000018467	rtcb	100	98.218	ENSFHEG00000009595	rtcb	100	98.218	Fundulus_heteroclitus
ENSPREG00000018467	rtcb	100	92.475	ENSGMOG00000018882	rtcb	100	92.475	Gadus_morhua
ENSPREG00000018467	rtcb	100	94.257	ENSGALG00000012611	RTCB	100	94.257	Gallus_gallus
ENSPREG00000018467	rtcb	100	99.010	ENSGAFG00000004198	rtcb	100	99.010	Gambusia_affinis
ENSPREG00000018467	rtcb	100	95.248	ENSGACG00000000586	rtcb	100	95.248	Gasterosteus_aculeatus
ENSPREG00000018467	rtcb	93	93.191	ENSGAGG00000019133	RTCB	98	93.191	Gopherus_agassizii
ENSPREG00000018467	rtcb	100	94.851	ENSGGOG00000011402	RTCB	100	94.851	Gorilla_gorilla
ENSPREG00000018467	rtcb	100	96.040	ENSHBUG00000020571	rtcb	100	96.040	Haplochromis_burtoni
ENSPREG00000018467	rtcb	100	94.653	ENSHGLG00000004492	RTCB	100	94.653	Heterocephalus_glaber_female
ENSPREG00000018467	rtcb	93	67.797	ENSHGLG00000001066	-	99	67.797	Heterocephalus_glaber_female
ENSPREG00000018467	rtcb	100	94.653	ENSHGLG00100008965	RTCB	100	94.653	Heterocephalus_glaber_male
ENSPREG00000018467	rtcb	100	93.491	ENSHCOG00000006450	rtcb	100	93.491	Hippocampus_comes
ENSPREG00000018467	rtcb	100	95.050	ENSIPUG00000015443	rtcb	100	95.050	Ictalurus_punctatus
ENSPREG00000018467	rtcb	100	95.050	ENSSTOG00000003878	RTCB	100	95.050	Ictidomys_tridecemlineatus
ENSPREG00000018467	rtcb	100	94.455	ENSJJAG00000010667	Rtcb	100	94.455	Jaculus_jaculus
ENSPREG00000018467	rtcb	100	97.030	ENSKMAG00000013178	rtcb	100	97.030	Kryptolebias_marmoratus
ENSPREG00000018467	rtcb	100	95.248	ENSLBEG00000000214	rtcb	100	95.248	Labrus_bergylta
ENSPREG00000018467	rtcb	100	96.436	ENSLBEG00000010566	RTCB	100	96.436	Labrus_bergylta
ENSPREG00000018467	rtcb	100	94.455	ENSLACG00000013033	RTCB	100	94.455	Latimeria_chalumnae
ENSPREG00000018467	rtcb	100	95.248	ENSLOCG00000016515	rtcb	99	95.248	Lepisosteus_oculatus
ENSPREG00000018467	rtcb	100	94.257	ENSLAFG00000002082	RTCB	100	94.257	Loxodonta_africana
ENSPREG00000018467	rtcb	100	94.653	ENSMFAG00000034419	RTCB	100	94.653	Macaca_fascicularis
ENSPREG00000018467	rtcb	100	94.653	ENSMMUG00000006720	RTCB	100	94.653	Macaca_mulatta
ENSPREG00000018467	rtcb	100	94.653	ENSMNEG00000040669	RTCB	100	94.653	Macaca_nemestrina
ENSPREG00000018467	rtcb	100	94.653	ENSMLEG00000040505	RTCB	100	94.653	Mandrillus_leucophaeus
ENSPREG00000018467	rtcb	100	96.832	ENSMAMG00000020676	rtcb	100	96.832	Mastacembelus_armatus
ENSPREG00000018467	rtcb	100	96.040	ENSMZEG00005018942	rtcb	100	96.040	Maylandia_zebra
ENSPREG00000018467	rtcb	100	93.886	ENSMGAG00000012805	RTCB	100	93.886	Meleagris_gallopavo
ENSPREG00000018467	rtcb	60	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSPREG00000018467	rtcb	100	94.851	ENSMICG00000013303	-	100	94.851	Microcebus_murinus
ENSPREG00000018467	rtcb	100	75.446	ENSMICG00000036677	-	100	75.446	Microcebus_murinus
ENSPREG00000018467	rtcb	100	94.455	ENSMOCG00000002440	Rtcb	100	94.455	Microtus_ochrogaster
ENSPREG00000018467	rtcb	100	96.634	ENSMMOG00000005987	rtcb	100	96.634	Mola_mola
ENSPREG00000018467	rtcb	100	94.257	ENSMODG00000001414	RTCB	100	94.257	Monodelphis_domestica
ENSPREG00000018467	rtcb	100	96.832	ENSMALG00000007603	rtcb	100	96.832	Monopterus_albus
ENSPREG00000018467	rtcb	100	94.653	MGP_CAROLIEiJ_G0015689	Rtcb	100	94.653	Mus_caroli
ENSPREG00000018467	rtcb	100	94.653	ENSMUSG00000001783	Rtcb	100	94.653	Mus_musculus
ENSPREG00000018467	rtcb	100	94.653	MGP_PahariEiJ_G0031396	Rtcb	100	94.653	Mus_pahari
ENSPREG00000018467	rtcb	100	94.653	MGP_SPRETEiJ_G0016507	Rtcb	100	94.653	Mus_spretus
ENSPREG00000018467	rtcb	100	94.851	ENSMPUG00000012285	RTCB	100	94.851	Mustela_putorius_furo
ENSPREG00000018467	rtcb	100	92.110	ENSMLUG00000007803	RTCB	100	92.110	Myotis_lucifugus
ENSPREG00000018467	rtcb	72	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSPREG00000018467	rtcb	100	96.238	ENSNBRG00000017202	rtcb	100	96.238	Neolamprologus_brichardi
ENSPREG00000018467	rtcb	100	94.851	ENSNLEG00000004960	RTCB	100	94.851	Nomascus_leucogenys
ENSPREG00000018467	rtcb	88	100.000	ENSMEUG00000007809	-	88	100.000	Notamacropus_eugenii
ENSPREG00000018467	rtcb	75	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSPREG00000018467	rtcb	82	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSPREG00000018467	rtcb	100	62.970	ENSODEG00000005042	-	100	62.970	Octodon_degus
ENSPREG00000018467	rtcb	100	96.832	ENSONIG00000007474	rtcb	100	96.832	Oreochromis_niloticus
ENSPREG00000018467	rtcb	100	94.059	ENSOANG00000005524	RTCB	100	94.059	Ornithorhynchus_anatinus
ENSPREG00000018467	rtcb	93	94.468	ENSOCUG00000008270	RTCB	96	94.468	Oryctolagus_cuniculus
ENSPREG00000018467	rtcb	100	96.634	ENSORLG00000020093	rtcb	100	96.634	Oryzias_latipes
ENSPREG00000018467	rtcb	100	96.634	ENSORLG00020003706	rtcb	100	96.634	Oryzias_latipes_hni
ENSPREG00000018467	rtcb	100	96.832	ENSORLG00015002968	rtcb	100	96.832	Oryzias_latipes_hsok
ENSPREG00000018467	rtcb	100	96.238	ENSOMEG00000021278	rtcb	100	96.238	Oryzias_melastigma
ENSPREG00000018467	rtcb	100	94.257	ENSOGAG00000001425	RTCB	100	94.257	Otolemur_garnettii
ENSPREG00000018467	rtcb	100	95.050	ENSOARG00000018008	RTCB	100	95.050	Ovis_aries
ENSPREG00000018467	rtcb	100	94.851	ENSPPAG00000028667	RTCB	100	94.851	Pan_paniscus
ENSPREG00000018467	rtcb	100	94.851	ENSPPRG00000004038	RTCB	100	94.851	Panthera_pardus
ENSPREG00000018467	rtcb	94	91.158	ENSPTIG00000020499	RTCB	97	92.211	Panthera_tigris_altaica
ENSPREG00000018467	rtcb	100	94.851	ENSPTRG00000014287	RTCB	100	94.851	Pan_troglodytes
ENSPREG00000018467	rtcb	100	94.653	ENSPANG00000016035	RTCB	100	94.653	Papio_anubis
ENSPREG00000018467	rtcb	100	94.455	ENSPKIG00000001881	rtcb	100	94.455	Paramormyrops_kingsleyae
ENSPREG00000018467	rtcb	91	95.000	ENSPSIG00000011690	RTCB	100	95.000	Pelodiscus_sinensis
ENSPREG00000018467	rtcb	100	96.040	ENSPMGG00000016672	rtcb	100	96.040	Periophthalmus_magnuspinnatus
ENSPREG00000018467	rtcb	100	94.653	ENSPEMG00000019548	Rtcb	100	94.653	Peromyscus_maniculatus_bairdii
ENSPREG00000018467	rtcb	100	91.683	ENSPMAG00000005657	rtcb	100	91.683	Petromyzon_marinus
ENSPREG00000018467	rtcb	100	94.257	ENSPCIG00000009467	RTCB	100	94.257	Phascolarctos_cinereus
ENSPREG00000018467	rtcb	100	99.406	ENSPFOG00000003058	rtcb	100	99.406	Poecilia_formosa
ENSPREG00000018467	rtcb	100	99.406	ENSPLAG00000017663	rtcb	100	99.406	Poecilia_latipinna
ENSPREG00000018467	rtcb	100	99.406	ENSPMEG00000006227	rtcb	100	99.406	Poecilia_mexicana
ENSPREG00000018467	rtcb	100	94.851	ENSPPYG00000011752	RTCB	100	94.851	Pongo_abelii
ENSPREG00000018467	rtcb	93	77.966	ENSPCAG00000013641	RTCB	100	77.966	Procavia_capensis
ENSPREG00000018467	rtcb	100	94.851	ENSPCOG00000017243	RTCB	100	94.851	Propithecus_coquereli
ENSPREG00000018467	rtcb	93	93.830	ENSPVAG00000002380	RTCB	100	93.830	Pteropus_vampyrus
ENSPREG00000018467	rtcb	100	96.040	ENSPNYG00000022760	rtcb	100	96.040	Pundamilia_nyererei
ENSPREG00000018467	rtcb	100	95.842	ENSPNAG00000009209	rtcb	100	95.842	Pygocentrus_nattereri
ENSPREG00000018467	rtcb	100	94.653	ENSRNOG00000004813	Rtcb	100	94.653	Rattus_norvegicus
ENSPREG00000018467	rtcb	100	86.561	ENSRBIG00000042090	RTCB	100	86.561	Rhinopithecus_bieti
ENSPREG00000018467	rtcb	100	90.099	ENSSBOG00000020085	-	100	90.099	Saimiri_boliviensis_boliviensis
ENSPREG00000018467	rtcb	94	95.781	ENSSHAG00000016277	RTCB	100	95.781	Sarcophilus_harrisii
ENSPREG00000018467	rtcb	100	93.861	ENSSFOG00015011572	RTCB	100	93.861	Scleropages_formosus
ENSPREG00000018467	rtcb	100	95.446	ENSSFOG00015000763	rtcb	100	95.446	Scleropages_formosus
ENSPREG00000018467	rtcb	100	92.871	ENSSMAG00000005096	rtcb	100	92.871	Scophthalmus_maximus
ENSPREG00000018467	rtcb	100	95.644	ENSSDUG00000012605	rtcb	100	95.644	Seriola_dumerili
ENSPREG00000018467	rtcb	100	95.644	ENSSLDG00000019458	rtcb	100	95.644	Seriola_lalandi_dorsalis
ENSPREG00000018467	rtcb	68	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSPREG00000018467	rtcb	100	93.663	ENSSPUG00000012814	RTCB	100	93.663	Sphenodon_punctatus
ENSPREG00000018467	rtcb	100	97.426	ENSSPAG00000004623	rtcb	100	97.426	Stegastes_partitus
ENSPREG00000018467	rtcb	100	94.851	ENSSSCG00000000158	RTCB	100	94.851	Sus_scrofa
ENSPREG00000018467	rtcb	100	94.455	ENSTGUG00000010947	RTCB	99	94.455	Taeniopygia_guttata
ENSPREG00000018467	rtcb	91	97.391	ENSTRUG00000009880	rtcb	100	97.391	Takifugu_rubripes
ENSPREG00000018467	rtcb	100	94.653	ENSTNIG00000002484	rtcb	100	94.653	Tetraodon_nigroviridis
ENSPREG00000018467	rtcb	100	81.386	ENSTBEG00000004418	RTCB	100	81.386	Tupaia_belangeri
ENSPREG00000018467	rtcb	93	94.043	ENSTTRG00000006417	RTCB	100	94.043	Tursiops_truncatus
ENSPREG00000018467	rtcb	100	94.851	ENSUAMG00000022792	RTCB	100	94.851	Ursus_americanus
ENSPREG00000018467	rtcb	100	94.851	ENSUMAG00000017225	RTCB	100	94.851	Ursus_maritimus
ENSPREG00000018467	rtcb	100	94.653	ENSVPAG00000005375	RTCB	100	94.653	Vicugna_pacos
ENSPREG00000018467	rtcb	100	94.851	ENSVVUG00000023408	RTCB	100	95.577	Vulpes_vulpes
ENSPREG00000018467	rtcb	100	93.267	ENSXETG00000011523	rtcb	100	93.267	Xenopus_tropicalis
ENSPREG00000018467	rtcb	100	99.208	ENSXMAG00000002855	rtcb	100	99.208	Xiphophorus_maculatus