EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPREG00000018470 (Gene tree)
Gene ID
103467469
Gene Symbol
-
Alias
sna2|snail-2|snail1b|snail2
Full Name
protein snail homolog Sna-like
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Plus strand
Length
1342 bases
Position
chrLG7:24516173-24517514
Accession
103467469
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000027320zf-C2H2PF00096.261.6e-2014
ENSPREP00000027320zf-C2H2PF00096.261.6e-2024
ENSPREP00000027320zf-C2H2PF00096.261.6e-2034
ENSPREP00000027320zf-C2H2PF00096.261.6e-2044
ENSPREP00000027320zf-metPF12874.70.0001311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000027611-819XM_008413874ENSPREP00000027320272 (aa)XP_008412096UPI0004A3CDF2
Gene Model
Click here to download ENSPREG00000018470's gene model file
Pathways
Pathway IDPathway NameSource
pret04520Adherens junctionKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000018470's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPREG00000018470-9833.779ENSPREG00000012166-9433.220
ENSPREG00000018470-9834.737ENSPREG00000018985scrt1b9433.571
ENSPREG00000018470-6858.696ENSPREG00000008528SNAI28550.400
ENSPREG00000018470-9957.196ENSPREG00000022303snai1a9656.767
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000018470-10082.721ENSAPOG00000016426-9782.890Acanthochromis_polyacanthus
ENSPREG00000018470-10058.182ENSAPOG00000002867snai1a9657.895Acanthochromis_polyacanthus
ENSPREG00000018470-9951.613ENSAPOG00000003886snai27651.282Acanthochromis_polyacanthus
ENSPREG00000018470-9951.254ENSACIG00000018641snai29751.282Amphilophus_citrinellus
ENSPREG00000018470-10055.273ENSACIG00000011318snai1a9654.511Amphilophus_citrinellus
ENSPREG00000018470-10074.453ENSACIG00000009443-9774.717Amphilophus_citrinellus
ENSPREG00000018470-10058.123ENSAOCG00000018003snai1a9657.621Amphiprion_ocellaris
ENSPREG00000018470-10085.294ENSAOCG00000019753-9786.312Amphiprion_ocellaris
ENSPREG00000018470-9951.613ENSAOCG00000017968snai29751.648Amphiprion_ocellaris
ENSPREG00000018470-10058.123ENSAPEG00000024286snai1a9657.621Amphiprion_percula
ENSPREG00000018470-10074.632ENSAPEG00000007647-9675.285Amphiprion_percula
ENSPREG00000018470-9951.613ENSAPEG00000002983snai29751.648Amphiprion_percula
ENSPREG00000018470-10083.088ENSATEG00000004944-9784.030Anabas_testudineus
ENSPREG00000018470-9951.613ENSATEG00000006892snai29751.282Anabas_testudineus
ENSPREG00000018470-9956.985ENSATEG00000015639snai1a9656.767Anabas_testudineus
ENSPREG00000018470-9949.296ENSAPLG00000003920-9750.000Anas_platyrhynchos
ENSPREG00000018470-7655.238ENSAPLG00000014633-8153.883Anas_platyrhynchos
ENSPREG00000018470-9950.000ENSACAG00000012332-9748.201Anolis_carolinensis
ENSPREG00000018470-8854.217ENSACAG00000015607SNAI18752.653Anolis_carolinensis
ENSPREG00000018470-10056.727ENSACLG00000020860snai1a9656.015Astatotilapia_calliptera
ENSPREG00000018470-9950.896ENSACLG00000018551snai29750.916Astatotilapia_calliptera
ENSPREG00000018470-10077.206ENSACLG00000026461-9777.186Astatotilapia_calliptera
ENSPREG00000018470-9961.455ENSAMXG00000039849snai1b9761.567Astyanax_mexicanus
ENSPREG00000018470-9950.538ENSAMXG00000038235snai29750.558Astyanax_mexicanus
ENSPREG00000018470-9847.653ENSBTAG00000014554SNAI19649.817Bos_taurus
ENSPREG00000018470-5449.324WBGene00019299snai-16650.000Caenorhabditis_elegans
ENSPREG00000018470-9847.653ENSCHIG00000014308SNAI19649.817Capra_hircus
ENSPREG00000018470-9948.592ENSCPOG00000033449-9749.458Cavia_porcellus
ENSPREG00000018470-9747.482ENSCHOG00000007046-9747.970Choloepus_hoffmanni
ENSPREG00000018470-9848.571ENSCGRG00001007749Snai19648.014Cricetulus_griseus_chok1gshd
ENSPREG00000018470-9848.571ENSCGRG00000009080Snai19648.014Cricetulus_griseus_crigri
ENSPREG00000018470-9957.244ENSCSEG00000009739snai1a9658.736Cynoglossus_semilaevis
ENSPREG00000018470-9950.000ENSCSEG00000010311snai29751.282Cynoglossus_semilaevis
ENSPREG00000018470-8967.623ENSCSEG00000021022-8867.511Cynoglossus_semilaevis
ENSPREG00000018470-9948.057ENSCVAG00000016483snai29748.746Cyprinodon_variegatus
ENSPREG00000018470-9958.088ENSCVAG00000008717snai1a9657.895Cyprinodon_variegatus
ENSPREG00000018470-10088.603ENSCVAG00000009930-9788.593Cyprinodon_variegatus
ENSPREG00000018470-10055.678ENSDARG00000056995snai1a9856.439Danio_rerio
ENSPREG00000018470-9949.645ENSDARG00000040046snai29649.455Danio_rerio
ENSPREG00000018470-9964.727ENSDARG00000046019snai1b9665.169Danio_rerio
ENSPREG00000018470-9847.584ENSDNOG00000024891-9647.547Dasypus_novemcinctus
ENSPREG00000018470-9948.944ENSDNOG00000035997-9749.458Dasypus_novemcinctus
ENSPREG00000018470-9943.206ENSETEG00000005777-9743.885Echinops_telfairi
ENSPREG00000018470-9948.611ENSEASG00005009186-9749.821Equus_asinus_asinus
ENSPREG00000018470-9948.611ENSECAG00000010120SNAI29749.821Equus_caballus
ENSPREG00000018470-10073.529ENSELUG00000002056SNAI19774.144Esox_lucius
ENSPREG00000018470-9250.391ENSELUG00000004844snai1a9150.391Esox_lucius
ENSPREG00000018470-9948.951ENSFCAG00000015779-9749.819Felis_catus
ENSPREG00000018470-9949.296ENSFALG00000005762-9750.000Ficedula_albicollis
ENSPREG00000018470-9988.727ENSFHEG00000022095-9789.139Fundulus_heteroclitus
ENSPREG00000018470-9951.264ENSFHEG00000012561snai29752.015Fundulus_heteroclitus
ENSPREG00000018470-9957.353ENSFHEG00000018724snai1a9656.767Fundulus_heteroclitus
ENSPREG00000018470-9759.176ENSGMOG00000017815snai1a9558.801Gadus_morhua
ENSPREG00000018470-9949.645ENSGMOG00000002669snai29749.638Gadus_morhua
ENSPREG00000018470-9666.412ENSGMOG00000000127-9866.031Gadus_morhua
ENSPREG00000018470-9948.582ENSGALG00000030902-9749.275Gallus_gallus
ENSPREG00000018470-9849.097ENSGALG00000008018SNAI19649.451Gallus_gallus
ENSPREG00000018470-10097.794ENSGAFG00000021126-10097.794Gambusia_affinis
ENSPREG00000018470-9956.777ENSGAFG00000020143snai1a9656.554Gambusia_affinis
ENSPREG00000018470-9951.625ENSGAFG00000021427snai29752.381Gambusia_affinis
ENSPREG00000018470-9949.466ENSGACG00000017935snai29748.913Gasterosteus_aculeatus
ENSPREG00000018470-9756.981ENSGACG00000010147snai1a9556.877Gasterosteus_aculeatus
ENSPREG00000018470-9973.801ENSGACG00000001618-9673.946Gasterosteus_aculeatus
ENSPREG00000018470-8852.000ENSGAGG00000022705SNAI18750.833Gopherus_agassizii
ENSPREG00000018470-9950.896ENSHBUG00000007764snai29750.916Haplochromis_burtoni
ENSPREG00000018470-10077.206ENSHBUG00000005726-9777.186Haplochromis_burtoni
ENSPREG00000018470-10056.727ENSHBUG00000013491snai1a9656.015Haplochromis_burtoni
ENSPREG00000018470-9948.944ENSHGLG00000009439SNAI29749.819Heterocephalus_glaber_female
ENSPREG00000018470-9948.944ENSHGLG00100007484SNAI29749.819Heterocephalus_glaber_male
ENSPREG00000018470-9878.358ENSHCOG00000020556-9678.788Hippocampus_comes
ENSPREG00000018470-10055.957ENSHCOG00000003407snai1a9657.249Hippocampus_comes
ENSPREG00000018470-10061.957ENSIPUG00000015844snai1b9762.547Ictalurus_punctatus
ENSPREG00000018470-9948.958ENSJJAG00000017495-9750.179Jaculus_jaculus
ENSPREG00000018470-10082.784ENSKMAG00000018546-9783.712Kryptolebias_marmoratus
ENSPREG00000018470-10057.818ENSKMAG00000021206snai1a9657.895Kryptolebias_marmoratus
ENSPREG00000018470-9950.719ENSKMAG00000005164snai29751.282Kryptolebias_marmoratus
ENSPREG00000018470-10057.664ENSLBEG00000017605snai1a9657.621Labrus_bergylta
ENSPREG00000018470-10083.088ENSLBEG00000006963-9784.030Labrus_bergylta
ENSPREG00000018470-9950.903ENSLBEG00000000972snai29751.648Labrus_bergylta
ENSPREG00000018470-9952.158ENSLACG00000017707SNAI19651.471Latimeria_chalumnae
ENSPREG00000018470-9948.951ENSLACG00000005413snai29749.643Latimeria_chalumnae
ENSPREG00000018470-10058.029ENSLOCG00000004443snai1a9657.736Lepisosteus_oculatus
ENSPREG00000018470-9959.636ENSMAMG00000020994snai1a9659.108Mastacembelus_armatus
ENSPREG00000018470-9951.254ENSMAMG00000015632snai29751.282Mastacembelus_armatus
ENSPREG00000018470-10083.088ENSMAMG00000010384-9784.030Mastacembelus_armatus
ENSPREG00000018470-10056.727ENSMZEG00005010038snai1a9656.015Maylandia_zebra
ENSPREG00000018470-9950.896ENSMZEG00005025060snai29750.916Maylandia_zebra
ENSPREG00000018470-10077.206ENSMZEG00005026596-9777.186Maylandia_zebra
ENSPREG00000018470-9849.458ENSMGAG00000009447SNAI19649.817Meleagris_gallopavo
ENSPREG00000018470-9949.296ENSMGAG00000010813-9750.000Meleagris_gallopavo
ENSPREG00000018470-9847.857ENSMAUG00000021592Snai19648.014Mesocricetus_auratus
ENSPREG00000018470-9948.239ENSMICG00000000335-9749.097Microcebus_murinus
ENSPREG00000018470-9847.857ENSMOCG00000007847Snai19648.014Microtus_ochrogaster
ENSPREG00000018470-10077.574ENSMMOG00000020343-9780.228Mola_mola
ENSPREG00000018470-9957.509ENSMMOG00000019965snai1a9656.554Mola_mola
ENSPREG00000018470-9854.317ENSMODG00000016309SNAI19754.015Monodelphis_domestica
ENSPREG00000018470-10081.618ENSMALG00000001010-9782.510Monopterus_albus
ENSPREG00000018470-9950.538ENSMALG00000021318snai29750.549Monopterus_albus
ENSPREG00000018470-10059.273ENSMALG00000005785snai1a9659.398Monopterus_albus
ENSPREG00000018470-9847.143MGP_CAROLIEiJ_G0024709Snai19647.292Mus_caroli
ENSPREG00000018470-9847.143MGP_PahariEiJ_G0026151Snai19647.292Mus_pahari
ENSPREG00000018470-9847.143MGP_SPRETEiJ_G0025629Snai19647.292Mus_spretus
ENSPREG00000018470-9947.535ENSNGAG00000009442-9747.670Nannospalax_galili
ENSPREG00000018470-9848.214ENSNGAG00000017185Snai19649.275Nannospalax_galili
ENSPREG00000018470-9855.185ENSNBRG00000003394-9654.647Neolamprologus_brichardi
ENSPREG00000018470-10075.000ENSNBRG00000014403-9774.905Neolamprologus_brichardi
ENSPREG00000018470-9950.896ENSNBRG00000011785snai29750.916Neolamprologus_brichardi
ENSPREG00000018470-8956.967ENSNBRG00000023091snai1a8756.170Neolamprologus_brichardi
ENSPREG00000018470-9948.944ENSODEG00000003654-9749.819Octodon_degus
ENSPREG00000018470-9849.281ENSODEG00000007856SNAI19648.718Octodon_degus
ENSPREG00000018470-10056.727ENSONIG00000020305snai1a9656.015Oreochromis_niloticus
ENSPREG00000018470-9950.896ENSONIG00000009542snai29750.916Oreochromis_niloticus
ENSPREG00000018470-10076.471ENSONIG00000017451-9776.806Oreochromis_niloticus
ENSPREG00000018470-8553.498ENSOANG00000008681SNAI18652.119Ornithorhynchus_anatinus
ENSPREG00000018470-9948.601ENSOCUG00000012254-9749.104Oryctolagus_cuniculus
ENSPREG00000018470-6958.974ENSOCUG00000005422SNAI15181.197Oryctolagus_cuniculus
ENSPREG00000018470-9951.625ENSORLG00000017475snai29751.661Oryzias_latipes
ENSPREG00000018470-10076.838ENSORLG00000009246-9777.567Oryzias_latipes
ENSPREG00000018470-10055.839ENSORLG00000023047snai1a9655.639Oryzias_latipes
ENSPREG00000018470-10076.838ENSORLG00020001758-9777.567Oryzias_latipes_hni
ENSPREG00000018470-9952.015ENSORLG00020008787snai29751.661Oryzias_latipes_hni
ENSPREG00000018470-10055.636ENSORLG00020019789snai1a9655.263Oryzias_latipes_hni
ENSPREG00000018470-10076.838ENSORLG00015019424-9777.567Oryzias_latipes_hsok
ENSPREG00000018470-9951.625ENSORLG00015008609snai29751.661Oryzias_latipes_hsok
ENSPREG00000018470-10055.839ENSORLG00015015416snai1a9655.639Oryzias_latipes_hsok
ENSPREG00000018470-10079.779ENSOMEG00000012928-9781.369Oryzias_melastigma
ENSPREG00000018470-10055.474ENSOMEG00000023773snai1a9655.263Oryzias_melastigma
ENSPREG00000018470-9951.087ENSOMEG00000006591snai29651.111Oryzias_melastigma
ENSPREG00000018470-9948.252ENSOGAG00000010500-9749.458Otolemur_garnettii
ENSPREG00000018470-9963.273ENSPKIG00000006393snai1a9664.419Paramormyrops_kingsleyae
ENSPREG00000018470-6364.327ENSPKIG00000006067-7263.590Paramormyrops_kingsleyae
ENSPREG00000018470-9853.004ENSPSIG00000003607SNAI19751.971Pelodiscus_sinensis
ENSPREG00000018470-9957.037ENSPMGG00000023198snai1a9656.439Periophthalmus_magnuspinnatus
ENSPREG00000018470-9968.864ENSPMGG00000006947-9670.566Periophthalmus_magnuspinnatus
ENSPREG00000018470-9847.857ENSPEMG00000023213Snai19648.913Peromyscus_maniculatus_bairdii
ENSPREG00000018470-9854.152ENSPCIG00000023282SNAI19753.846Phascolarctos_cinereus
ENSPREG00000018470-10092.279ENSPFOG00000008667-9794.297Poecilia_formosa
ENSPREG00000018470-9951.625ENSPFOG00000014336snai29752.381Poecilia_formosa
ENSPREG00000018470-9957.353ENSPFOG00000015709snai1a9657.143Poecilia_formosa
ENSPREG00000018470-9951.625ENSPLAG00000009941snai29752.381Poecilia_latipinna
ENSPREG00000018470-8857.202ENSPLAG00000011169snai1a8957.447Poecilia_latipinna
ENSPREG00000018470-10094.118ENSPLAG00000010605-10094.118Poecilia_latipinna
ENSPREG00000018470-10092.279ENSPMEG00000007205-9793.536Poecilia_mexicana
ENSPREG00000018470-9951.625ENSPMEG00000024022snai29752.381Poecilia_mexicana
ENSPREG00000018470-9957.353ENSPMEG00000017260snai1a9657.143Poecilia_mexicana
ENSPREG00000018470-9947.518ENSPCAG00000001788-9747.464Procavia_capensis
ENSPREG00000018470-9950.896ENSPNYG00000015217snai29750.916Pundamilia_nyererei
ENSPREG00000018470-10056.727ENSPNYG00000018944snai1a9656.015Pundamilia_nyererei
ENSPREG00000018470-10075.735ENSPNYG00000001207-9775.665Pundamilia_nyererei
ENSPREG00000018470-9951.439ENSPNAG00000015896snai29751.301Pygocentrus_nattereri
ENSPREG00000018470-10062.094ENSPNAG00000024123snai1b9762.825Pygocentrus_nattereri
ENSPREG00000018470-9847.500ENSRNOG00000009594Snai19647.653Rattus_norvegicus
ENSPREG00000018470-9949.306ENSRNOG00000047699Snai29749.291Rattus_norvegicus
ENSPREG00000018470-9853.069ENSSHAG00000011015SNAI19753.285Sarcophilus_harrisii
ENSPREG00000018470-9842.238ENSSFOG00015021176-9646.863Scleropages_formosus
ENSPREG00000018470-10063.406ENSSFOG00015021578snai1a9664.794Scleropages_formosus
ENSPREG00000018470-9957.664ENSSMAG00000013652snai1a9657.249Scophthalmus_maximus
ENSPREG00000018470-10082.079ENSSMAG00000008834-9780.741Scophthalmus_maximus
ENSPREG00000018470-9950.542ENSSMAG00000019364snai29751.282Scophthalmus_maximus
ENSPREG00000018470-10058.394ENSSDUG00000019933snai1a9658.491Seriola_dumerili
ENSPREG00000018470-10081.655ENSSDUG00000017250-9781.413Seriola_dumerili
ENSPREG00000018470-9951.254ENSSDUG00000018060snai29751.282Seriola_dumerili
ENSPREG00000018470-9951.254ENSSLDG00000012852snai29751.282Seriola_lalandi_dorsalis
ENSPREG00000018470-10058.394ENSSLDG00000011412snai1a9658.491Seriola_lalandi_dorsalis
ENSPREG00000018470-10082.014ENSSLDG00000025359-9781.784Seriola_lalandi_dorsalis
ENSPREG00000018470-9852.297ENSSPUG00000018057SNAI19751.613Sphenodon_punctatus
ENSPREG00000018470-10084.191ENSSPAG00000001098-9785.171Stegastes_partitus
ENSPREG00000018470-9951.613ENSSPAG00000022061snai29751.648Stegastes_partitus
ENSPREG00000018470-10057.762ENSSPAG00000001874snai1a9657.621Stegastes_partitus
ENSPREG00000018470-9849.455ENSSSCG00000032613SNAI19650.730Sus_scrofa
ENSPREG00000018470-9848.162ENSTGUG00000008724SNAI19649.814Taeniopygia_guttata
ENSPREG00000018470-9949.296ENSTGUG00000010914-9750.000Taeniopygia_guttata
ENSPREG00000018470-9950.903ENSTRUG00000025588snai29751.648Takifugu_rubripes
ENSPREG00000018470-9957.565ENSTRUG00000022990sna19658.736Takifugu_rubripes
ENSPREG00000018470-10076.838ENSTRUG00000000419sna29778.707Takifugu_rubripes
ENSPREG00000018470-9957.934ENSTNIG00000007311snai1a9758.303Tetraodon_nigroviridis
ENSPREG00000018470-10078.676ENSTNIG00000003865-9779.848Tetraodon_nigroviridis
ENSPREG00000018470-9951.613ENSTNIG00000008504snai29751.648Tetraodon_nigroviridis
ENSPREG00000018470-9849.091ENSTTRG00000002029SNAI19650.365Tursiops_truncatus
ENSPREG00000018470-9852.297ENSXETG00000027366snai19753.047Xenopus_tropicalis
ENSPREG00000018470-10086.029ENSXCOG00000008003-9685.932Xiphophorus_couchianus
ENSPREG00000018470-9957.509ENSXCOG00000017528snai1a9658.052Xiphophorus_couchianus
ENSPREG00000018470-9950.719ENSXCOG00000015084snai29751.460Xiphophorus_couchianus
ENSPREG00000018470-10095.588ENSXMAG00000015281-9795.817Xiphophorus_maculatus
ENSPREG00000018470-9957.875ENSXMAG00000027735snai1a9658.427Xiphophorus_maculatus
ENSPREG00000018470-9951.625ENSXMAG00000019030snai29752.381Xiphophorus_maculatus

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