EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000018541 (Gene tree)
Gene ID: 103477602
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 7658 bases
Position: chrLG16:3009302-3016959
Accession: 103477602
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000027417	zf-U11-48K	PF05253.12	8.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000027713	-	1533	XM_008430806	ENSPREP00000027417	342 (aa)	XP_008429028	UPI0004A29822

Gene Model

Click here to download ENSPREG00000018541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000018541's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000018541	snrnp48	80	48.936	ENSG00000168566	SNRNP48	72	52.033	Homo_sapiens
ENSPREG00000018541	snrnp48	96	75.305	ENSAPOG00000021430	snrnp48	81	77.091	Acanthochromis_polyacanthus
ENSPREG00000018541	snrnp48	93	44.214	ENSAMEG00000017349	SNRNP48	69	50.000	Ailuropoda_melanoleuca
ENSPREG00000018541	snrnp48	94	71.340	ENSACIG00000002032	snrnp48	95	70.859	Amphilophus_citrinellus
ENSPREG00000018541	snrnp48	95	74.847	ENSAOCG00000010562	snrnp48	95	75.153	Amphiprion_ocellaris
ENSPREG00000018541	snrnp48	95	74.540	ENSAPEG00000003231	snrnp48	95	74.847	Amphiprion_percula
ENSPREG00000018541	snrnp48	93	75.078	ENSATEG00000020210	snrnp48	74	81.124	Anabas_testudineus
ENSPREG00000018541	snrnp48	81	50.345	ENSACAG00000002811	SNRNP48	62	56.219	Anolis_carolinensis
ENSPREG00000018541	snrnp48	80	49.291	ENSANAG00000033538	SNRNP48	72	52.439	Aotus_nancymaae
ENSPREG00000018541	snrnp48	94	57.231	ENSAMXG00000015309	snrnp48	77	64.706	Astyanax_mexicanus
ENSPREG00000018541	snrnp48	92	44.179	ENSBTAG00000001123	SNRNP48	71	48.980	Bos_taurus
ENSPREG00000018541	snrnp48	80	49.291	ENSCJAG00000021330	SNRNP48	72	52.439	Callithrix_jacchus
ENSPREG00000018541	snrnp48	92	44.444	ENSCAFG00000009574	SNRNP48	59	49.794	Canis_familiaris
ENSPREG00000018541	snrnp48	92	44.444	ENSCAFG00020013203	SNRNP48	71	49.794	Canis_lupus_dingo
ENSPREG00000018541	snrnp48	92	44.478	ENSCHIG00000015216	SNRNP48	71	49.796	Capra_hircus
ENSPREG00000018541	snrnp48	80	48.582	ENSTSYG00000000698	SNRNP48	72	51.220	Carlito_syrichta
ENSPREG00000018541	snrnp48	87	44.410	ENSCAPG00000006768	SNRNP48	65	54.726	Cavia_aperea
ENSPREG00000018541	snrnp48	93	44.477	ENSCPOG00000007910	SNRNP48	72	51.626	Cavia_porcellus
ENSPREG00000018541	snrnp48	80	48.746	ENSCCAG00000035652	SNRNP48	71	51.852	Cebus_capucinus
ENSPREG00000018541	snrnp48	93	45.133	ENSCATG00000033947	SNRNP48	79	44.737	Cercocebus_atys
ENSPREG00000018541	snrnp48	80	48.936	ENSCLAG00000003765	SNRNP48	73	50.598	Chinchilla_lanigera
ENSPREG00000018541	snrnp48	80	49.291	ENSCSAG00000007409	SNRNP48	72	52.033	Chlorocebus_sabaeus
ENSPREG00000018541	snrnp48	82	48.675	ENSCPBG00000019146	SNRNP48	64	54.589	Chrysemys_picta_bellii
ENSPREG00000018541	snrnp48	80	49.291	ENSCANG00000030017	SNRNP48	72	52.439	Colobus_angolensis_palliatus
ENSPREG00000018541	snrnp48	80	42.403	ENSCGRG00001008805	-	80	43.359	Cricetulus_griseus_chok1gshd
ENSPREG00000018541	snrnp48	93	45.266	ENSCGRG00001001076	-	74	50.199	Cricetulus_griseus_chok1gshd
ENSPREG00000018541	snrnp48	93	45.266	ENSCGRG00000007781	Snrnp48	74	50.199	Cricetulus_griseus_crigri
ENSPREG00000018541	snrnp48	94	64.486	ENSCSEG00000000722	snrnp48	90	62.928	Cynoglossus_semilaevis
ENSPREG00000018541	snrnp48	92	81.789	ENSCVAG00000019829	snrnp48	71	84.727	Cyprinodon_variegatus
ENSPREG00000018541	snrnp48	92	55.000	ENSDARG00000039989	snrnp48	79	58.148	Danio_rerio
ENSPREG00000018541	snrnp48	80	47.500	ENSDNOG00000014978	SNRNP48	81	42.857	Dasypus_novemcinctus
ENSPREG00000018541	snrnp48	93	44.412	ENSDORG00000015140	Snrnp48	72	50.607	Dipodomys_ordii
ENSPREG00000018541	snrnp48	80	48.582	ENSEASG00005012021	SNRNP48	72	51.220	Equus_asinus_asinus
ENSPREG00000018541	snrnp48	80	48.582	ENSECAG00000026937	SNRNP48	72	51.220	Equus_caballus
ENSPREG00000018541	snrnp48	93	32.239	ENSEEUG00000015437	SNRNP48	72	34.413	Erinaceus_europaeus
ENSPREG00000018541	snrnp48	94	59.118	ENSELUG00000009766	snrnp48	71	64.706	Esox_lucius
ENSPREG00000018541	snrnp48	80	47.670	ENSFCAG00000018853	SNRNP48	71	50.206	Felis_catus
ENSPREG00000018541	snrnp48	68	54.583	ENSFALG00000007797	SNRNP48	64	58.911	Ficedula_albicollis
ENSPREG00000018541	snrnp48	93	45.133	ENSFDAG00000009231	SNRNP48	72	51.220	Fukomys_damarensis
ENSPREG00000018541	snrnp48	64	87.892	ENSFHEG00000014647	snrnp48	95	85.921	Fundulus_heteroclitus
ENSPREG00000018541	snrnp48	90	60.615	ENSGMOG00000018599	-	77	71.660	Gadus_morhua
ENSPREG00000018541	snrnp48	77	52.381	ENSGALG00000013005	SNRNP48	67	58.911	Gallus_gallus
ENSPREG00000018541	snrnp48	95	95.399	ENSGAFG00000021639	snrnp48	95	95.399	Gambusia_affinis
ENSPREG00000018541	snrnp48	73	77.200	ENSGACG00000017756	-	74	77.823	Gasterosteus_aculeatus
ENSPREG00000018541	snrnp48	83	48.355	ENSGAGG00000000865	SNRNP48	68	53.589	Gopherus_agassizii
ENSPREG00000018541	snrnp48	80	49.291	ENSGGOG00000013220	SNRNP48	72	52.439	Gorilla_gorilla
ENSPREG00000018541	snrnp48	94	75.078	ENSHBUG00000017066	snrnp48	94	74.540	Haplochromis_burtoni
ENSPREG00000018541	snrnp48	80	47.872	ENSHGLG00000015241	SNRNP48	72	50.407	Heterocephalus_glaber_female
ENSPREG00000018541	snrnp48	80	47.872	ENSHGLG00100010027	SNRNP48	72	50.407	Heterocephalus_glaber_male
ENSPREG00000018541	snrnp48	74	72.835	ENSHCOG00000014066	snrnp48	73	72.835	Hippocampus_comes
ENSPREG00000018541	snrnp48	80	48.936	ENSSTOG00000014635	SNRNP48	73	50.199	Ictidomys_tridecemlineatus
ENSPREG00000018541	snrnp48	79	48.561	ENSJJAG00000011495	Snrnp48	71	51.240	Jaculus_jaculus
ENSPREG00000018541	snrnp48	95	77.064	ENSKMAG00000016514	snrnp48	81	81.522	Kryptolebias_marmoratus
ENSPREG00000018541	snrnp48	81	74.101	ENSLBEG00000026249	snrnp48	95	73.089	Labrus_bergylta
ENSPREG00000018541	snrnp48	91	51.642	ENSLACG00000003958	SNRNP48	74	55.952	Latimeria_chalumnae
ENSPREG00000018541	snrnp48	85	59.450	ENSLOCG00000004187	snrnp48	75	62.302	Lepisosteus_oculatus
ENSPREG00000018541	snrnp48	71	51.587	ENSLAFG00000011152	SNRNP48	72	51.417	Loxodonta_africana
ENSPREG00000018541	snrnp48	80	49.291	ENSMFAG00000045216	SNRNP48	79	45.614	Macaca_fascicularis
ENSPREG00000018541	snrnp48	80	49.291	ENSMMUG00000014785	SNRNP48	72	52.439	Macaca_mulatta
ENSPREG00000018541	snrnp48	80	49.645	ENSMNEG00000042269	SNRNP48	72	52.846	Macaca_nemestrina
ENSPREG00000018541	snrnp48	80	49.291	ENSMLEG00000034004	SNRNP48	79	45.614	Mandrillus_leucophaeus
ENSPREG00000018541	snrnp48	95	67.890	ENSMAMG00000018673	snrnp48	66	77.165	Mastacembelus_armatus
ENSPREG00000018541	snrnp48	81	49.342	ENSMGAG00000006037	SNRNP48	67	58.416	Meleagris_gallopavo
ENSPREG00000018541	snrnp48	96	43.391	ENSMAUG00000011944	Snrnp48	76	49.219	Mesocricetus_auratus
ENSPREG00000018541	snrnp48	80	48.410	ENSMICG00000012497	SNRNP48	72	51.012	Microcebus_murinus
ENSPREG00000018541	snrnp48	93	45.428	ENSMOCG00000015555	Snrnp48	74	50.397	Microtus_ochrogaster
ENSPREG00000018541	snrnp48	56	80.208	ENSMMOG00000003072	-	61	80.208	Mola_mola
ENSPREG00000018541	snrnp48	83	47.987	ENSMODG00000009996	SNRNP48	69	49.035	Monodelphis_domestica
ENSPREG00000018541	snrnp48	96	71.646	ENSMALG00000005725	snrnp48	95	74.618	Monopterus_albus
ENSPREG00000018541	snrnp48	93	44.248	MGP_CAROLIEiJ_G0018441	Snrnp48	74	49.402	Mus_caroli
ENSPREG00000018541	snrnp48	93	44.248	ENSMUSG00000021431	Snrnp48	74	49.402	Mus_musculus
ENSPREG00000018541	snrnp48	93	44.543	MGP_PahariEiJ_G0019509	Snrnp48	74	49.801	Mus_pahari
ENSPREG00000018541	snrnp48	93	44.248	MGP_SPRETEiJ_G0019321	Snrnp48	74	49.402	Mus_spretus
ENSPREG00000018541	snrnp48	93	46.765	ENSNGAG00000004849	Snrnp48	72	53.441	Nannospalax_galili
ENSPREG00000018541	snrnp48	94	75.078	ENSNBRG00000012127	snrnp48	94	74.540	Neolamprologus_brichardi
ENSPREG00000018541	snrnp48	80	49.291	ENSNLEG00000011667	SNRNP48	72	52.439	Nomascus_leucogenys
ENSPREG00000018541	snrnp48	80	48.214	ENSOPRG00000015471	SNRNP48	75	50.820	Ochotona_princeps
ENSPREG00000018541	snrnp48	94	75.701	ENSONIG00000001520	snrnp48	94	75.153	Oreochromis_niloticus
ENSPREG00000018541	snrnp48	52	37.811	ENSOANG00000019888	-	99	38.278	Ornithorhynchus_anatinus
ENSPREG00000018541	snrnp48	79	48.188	ENSOCUG00000005168	SNRNP48	82	50.199	Oryctolagus_cuniculus
ENSPREG00000018541	snrnp48	87	75.839	ENSORLG00000015654	snrnp48	94	72.393	Oryzias_latipes
ENSPREG00000018541	snrnp48	87	74.161	ENSORLG00020015976	snrnp48	80	71.779	Oryzias_latipes_hni
ENSPREG00000018541	snrnp48	87	73.826	ENSORLG00015022379	snrnp48	80	71.472	Oryzias_latipes_hsok
ENSPREG00000018541	snrnp48	94	75.776	ENSOMEG00000022007	snrnp48	94	72.699	Oryzias_melastigma
ENSPREG00000018541	snrnp48	80	48.763	ENSOGAG00000005275	SNRNP48	74	51.012	Otolemur_garnettii
ENSPREG00000018541	snrnp48	82	47.119	ENSOARG00000017319	SNRNP48	69	54.455	Ovis_aries
ENSPREG00000018541	snrnp48	80	49.291	ENSPPAG00000032873	SNRNP48	72	52.439	Pan_paniscus
ENSPREG00000018541	snrnp48	80	47.872	ENSPPRG00000004283	SNRNP48	72	50.407	Panthera_pardus
ENSPREG00000018541	snrnp48	68	50.211	ENSPTIG00000013502	SNRNP48	69	53.731	Panthera_tigris_altaica
ENSPREG00000018541	snrnp48	80	49.291	ENSPTRG00000017703	SNRNP48	72	52.439	Pan_troglodytes
ENSPREG00000018541	snrnp48	80	49.291	ENSPANG00000000771	SNRNP48	79	45.614	Papio_anubis
ENSPREG00000018541	snrnp48	90	56.024	ENSPKIG00000013703	snrnp48	53	64.257	Paramormyrops_kingsleyae
ENSPREG00000018541	snrnp48	77	49.104	ENSPSIG00000002213	SNRNP48	63	55.392	Pelodiscus_sinensis
ENSPREG00000018541	snrnp48	80	64.057	ENSPMGG00000008120	snrnp48	91	67.442	Periophthalmus_magnuspinnatus
ENSPREG00000018541	snrnp48	93	45.858	ENSPEMG00000008872	Snrnp48	74	50.996	Peromyscus_maniculatus_bairdii
ENSPREG00000018541	snrnp48	100	96.784	ENSPFOG00000003578	snrnp48	100	96.784	Poecilia_formosa
ENSPREG00000018541	snrnp48	69	98.305	ENSPLAG00000002290	snrnp48	82	98.305	Poecilia_latipinna
ENSPREG00000018541	snrnp48	100	97.368	ENSPMEG00000018033	snrnp48	100	97.368	Poecilia_mexicana
ENSPREG00000018541	snrnp48	80	49.291	ENSPPYG00000016209	SNRNP48	72	52.439	Pongo_abelii
ENSPREG00000018541	snrnp48	70	38.554	ENSPCAG00000011991	SNRNP48	95	38.672	Procavia_capensis
ENSPREG00000018541	snrnp48	82	46.853	ENSPVAG00000002854	SNRNP48	73	49.200	Pteropus_vampyrus
ENSPREG00000018541	snrnp48	92	75.000	ENSPNYG00000015399	snrnp48	88	76.727	Pundamilia_nyererei
ENSPREG00000018541	snrnp48	93	45.266	ENSRNOG00000013756	Snrnp48	74	50.199	Rattus_norvegicus
ENSPREG00000018541	snrnp48	80	49.291	ENSRBIG00000043856	SNRNP48	77	52.439	Rhinopithecus_bieti
ENSPREG00000018541	snrnp48	80	49.291	ENSRROG00000043229	SNRNP48	72	52.439	Rhinopithecus_roxellana
ENSPREG00000018541	snrnp48	80	49.645	ENSSBOG00000019486	SNRNP48	72	52.846	Saimiri_boliviensis_boliviensis
ENSPREG00000018541	snrnp48	81	48.464	ENSSHAG00000014483	SNRNP48	72	49.606	Sarcophilus_harrisii
ENSPREG00000018541	snrnp48	73	61.569	ENSSFOG00015006610	snrnp48	60	61.811	Scleropages_formosus
ENSPREG00000018541	snrnp48	95	74.006	ENSSDUG00000014953	snrnp48	95	74.006	Seriola_dumerili
ENSPREG00000018541	snrnp48	95	73.252	ENSSLDG00000005989	snrnp48	95	73.252	Seriola_lalandi_dorsalis
ENSPREG00000018541	snrnp48	77	50.000	ENSSPUG00000006257	SNRNP48	62	53.182	Sphenodon_punctatus
ENSPREG00000018541	snrnp48	96	76.147	ENSSPAG00000006454	snrnp48	95	76.380	Stegastes_partitus
ENSPREG00000018541	snrnp48	78	48.814	ENSTGUG00000007575	SNRNP48	67	55.924	Taeniopygia_guttata
ENSPREG00000018541	snrnp48	95	62.805	ENSTRUG00000007031	snrnp48	75	72.549	Takifugu_rubripes
ENSPREG00000018541	snrnp48	98	66.071	ENSTNIG00000012977	-	83	69.455	Tetraodon_nigroviridis
ENSPREG00000018541	snrnp48	73	49.609	ENSTBEG00000015620	SNRNP48	74	49.402	Tupaia_belangeri
ENSPREG00000018541	snrnp48	92	43.713	ENSTTRG00000016715	SNRNP48	71	49.794	Tursiops_truncatus
ENSPREG00000018541	snrnp48	93	44.144	ENSUAMG00000003690	SNRNP48	71	50.000	Ursus_americanus
ENSPREG00000018541	snrnp48	68	50.840	ENSVPAG00000003557	SNRNP48	69	53.465	Vicugna_pacos
ENSPREG00000018541	snrnp48	92	44.444	ENSVVUG00000004996	SNRNP48	71	49.794	Vulpes_vulpes
ENSPREG00000018541	snrnp48	84	47.059	ENSXETG00000020447	snrnp48	70	50.628	Xenopus_tropicalis
ENSPREG00000018541	snrnp48	95	86.503	ENSXCOG00000004478	snrnp48	95	86.503	Xiphophorus_couchianus
ENSPREG00000018541	snrnp48	95	95.092	ENSXMAG00000013595	snrnp48	95	95.092	Xiphophorus_maculatus