EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000018608 (Gene tree)
Gene ID: -
Gene Symbol: zgc:153215
Alias: fe11g10|im:6907990|wu:fe11g10
Full Name: RNA-binding protein 12B-B-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 1938 bases
Position: chrLG16:16319435-16321372
Accession: 103478657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000027506	RRM_1	PF00076.22	1.9e-22	1	2
ENSPREP00000027506	RRM_1	PF00076.22	1.9e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000027806	-	1440	XM_008432634	ENSPREP00000027506	479 (aa)	XP_008430856	-

Gene Model

Click here to download ENSPREG00000018608's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000018608's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000018608	zgc:153215	99	30.620	ENSG00000183808	RBM12B	99	51.852	Homo_sapiens
ENSPREG00000018608	zgc:153215	97	44.681	ENSAPOG00000008836	zgc:153215	95	44.681	Acanthochromis_polyacanthus
ENSPREG00000018608	zgc:153215	99	30.156	ENSAMEG00000007134	RBM12B	57	30.156	Ailuropoda_melanoleuca
ENSPREG00000018608	zgc:153215	98	51.230	ENSACIG00000013317	zgc:153215	99	51.230	Amphilophus_citrinellus
ENSPREG00000018608	zgc:153215	70	30.702	ENSACIG00000014943	rbm12b	97	30.986	Amphilophus_citrinellus
ENSPREG00000018608	zgc:153215	99	47.173	ENSAOCG00000010819	zgc:153215	99	47.953	Amphiprion_ocellaris
ENSPREG00000018608	zgc:153215	99	34.008	ENSAPEG00000022079	rbm12b	99	31.609	Amphiprion_percula
ENSPREG00000018608	zgc:153215	99	30.920	ENSATEG00000004578	rbm12b	72	31.115	Anabas_testudineus
ENSPREG00000018608	zgc:153215	99	46.141	ENSATEG00000001886	zgc:153215	99	46.312	Anabas_testudineus
ENSPREG00000018608	zgc:153215	99	49.407	ENSACLG00000007675	zgc:153215	99	49.407	Astatotilapia_calliptera
ENSPREG00000018608	zgc:153215	86	50.538	ENSAMXG00000020853	zgc:153215	70	50.538	Astyanax_mexicanus
ENSPREG00000018608	zgc:153215	99	30.485	ENSCAPG00000003543	RBM12B	51	30.485	Cavia_aperea
ENSPREG00000018608	zgc:153215	99	30.485	ENSCPOG00000007815	RBM12B	51	30.485	Cavia_porcellus
ENSPREG00000018608	zgc:153215	99	30.460	ENSCATG00000030769	RBM12B	57	30.460	Cercocebus_atys
ENSPREG00000018608	zgc:153215	99	30.171	ENSCLAG00000017617	RBM12B	51	30.171	Chinchilla_lanigera
ENSPREG00000018608	zgc:153215	99	30.460	ENSCANG00000030379	RBM12B	56	30.460	Colobus_angolensis_palliatus
ENSPREG00000018608	zgc:153215	99	30.920	ENSCSEG00000004610	rbm12b	70	30.920	Cynoglossus_semilaevis
ENSPREG00000018608	zgc:153215	80	47.258	ENSCSEG00000001575	-	98	47.258	Cynoglossus_semilaevis
ENSPREG00000018608	zgc:153215	99	53.689	ENSCVAG00000009259	-	100	53.689	Cyprinodon_variegatus
ENSPREG00000018608	zgc:153215	99	34.659	ENSDARG00000055889	zgc:153215	99	35.417	Danio_rerio
ENSPREG00000018608	zgc:153215	99	31.349	ENSETEG00000013005	-	65	31.349	Echinops_telfairi
ENSPREG00000018608	zgc:153215	99	30.545	ENSECAG00000017870	RBM12B	50	30.545	Equus_caballus
ENSPREG00000018608	zgc:153215	99	37.786	ENSELUG00000009039	zgc:153215	97	37.786	Esox_lucius
ENSPREG00000018608	zgc:153215	99	30.192	ENSFDAG00000005576	RBM12B	50	30.192	Fukomys_damarensis
ENSPREG00000018608	zgc:153215	98	62.712	ENSFHEG00000014539	zgc:153215	96	52.361	Fundulus_heteroclitus
ENSPREG00000018608	zgc:153215	99	30.754	ENSGMOG00000013467	rbm12b	74	30.754	Gadus_morhua
ENSPREG00000018608	zgc:153215	98	88.125	ENSGAFG00000007845	zgc:153215	98	88.125	Gambusia_affinis
ENSPREG00000018608	zgc:153215	99	30.664	ENSGGOG00000011909	RBM12B	56	30.664	Gorilla_gorilla
ENSPREG00000018608	zgc:153215	99	45.502	ENSHBUG00000016150	zgc:153215	99	45.502	Haplochromis_burtoni
ENSPREG00000018608	zgc:153215	99	34.381	ENSIPUG00000019731	zgc:153215	98	34.381	Ictalurus_punctatus
ENSPREG00000018608	zgc:153215	99	30.178	ENSIPUG00000001167	RBM12B	71	30.178	Ictalurus_punctatus
ENSPREG00000018608	zgc:153215	99	30.739	ENSSTOG00000027445	RBM12B	58	30.739	Ictidomys_tridecemlineatus
ENSPREG00000018608	zgc:153215	100	44.981	ENSKMAG00000004958	zgc:153215	100	44.981	Kryptolebias_marmoratus
ENSPREG00000018608	zgc:153215	99	53.737	ENSLBEG00000002597	zgc:153215	99	54.141	Labrus_bergylta
ENSPREG00000018608	zgc:153215	99	32.157	ENSLOCG00000018344	rbm12b	74	32.157	Lepisosteus_oculatus
ENSPREG00000018608	zgc:153215	99	31.774	ENSLAFG00000029949	RBM12B	57	31.774	Loxodonta_africana
ENSPREG00000018608	zgc:153215	99	30.286	ENSMFAG00000045430	RBM12B	56	30.286	Macaca_fascicularis
ENSPREG00000018608	zgc:153215	99	30.608	ENSMMUG00000005558	RBM12B	55	30.344	Macaca_mulatta
ENSPREG00000018608	zgc:153215	99	30.286	ENSMNEG00000041292	RBM12B	56	30.286	Macaca_nemestrina
ENSPREG00000018608	zgc:153215	99	30.604	ENSMLEG00000037288	RBM12B	55	30.604	Mandrillus_leucophaeus
ENSPREG00000018608	zgc:153215	99	30.815	ENSMAMG00000011998	rbm12b	73	30.815	Mastacembelus_armatus
ENSPREG00000018608	zgc:153215	99	46.168	ENSMAMG00000012038	zgc:153215	99	46.168	Mastacembelus_armatus
ENSPREG00000018608	zgc:153215	99	45.581	ENSMZEG00005005435	zgc:153215	99	44.714	Maylandia_zebra
ENSPREG00000018608	zgc:153215	99	30.097	ENSMICG00000036969	RBM12B	57	30.097	Microcebus_murinus
ENSPREG00000018608	zgc:153215	83	45.556	ENSMMOG00000002404	rbm12b	67	45.556	Mola_mola
ENSPREG00000018608	zgc:153215	95	51.136	ENSMMOG00000003372	zgc:153215	99	51.136	Mola_mola
ENSPREG00000018608	zgc:153215	99	30.784	ENSMODG00000007436	RBM12B	66	31.015	Monodelphis_domestica
ENSPREG00000018608	zgc:153215	99	48.984	ENSMALG00000001222	zgc:153215	99	48.984	Monopterus_albus
ENSPREG00000018608	zgc:153215	100	30.303	MGP_SPRETEiJ_G0026766	-	58	30.303	Mus_spretus
ENSPREG00000018608	zgc:153215	100	30.303	MGP_SPRETEiJ_G0026765	-	53	30.303	Mus_spretus
ENSPREG00000018608	zgc:153215	99	30.368	ENSMLUG00000002359	RBM12B	51	30.368	Myotis_lucifugus
ENSPREG00000018608	zgc:153215	99	30.134	ENSNGAG00000002801	-	53	30.134	Nannospalax_galili
ENSPREG00000018608	zgc:153215	99	44.464	ENSNBRG00000013644	zgc:153215	99	44.464	Neolamprologus_brichardi
ENSPREG00000018608	zgc:153215	99	30.077	ENSNLEG00000032050	RBM12B	55	30.077	Nomascus_leucogenys
ENSPREG00000018608	zgc:153215	99	47.238	ENSONIG00000006054	zgc:153215	99	47.238	Oreochromis_niloticus
ENSPREG00000018608	zgc:153215	100	30.769	ENSOANG00000015735	-	70	31.154	Ornithorhynchus_anatinus
ENSPREG00000018608	zgc:153215	99	30.233	ENSOCUG00000010353	RBM12B	56	30.233	Oryctolagus_cuniculus
ENSPREG00000018608	zgc:153215	99	30.572	ENSORLG00000008228	rbm12b	71	30.572	Oryzias_latipes
ENSPREG00000018608	zgc:153215	99	30.769	ENSORLG00020013619	rbm12b	71	30.769	Oryzias_latipes_hni
ENSPREG00000018608	zgc:153215	99	30.769	ENSORLG00015019999	rbm12b	71	30.769	Oryzias_latipes_hsok
ENSPREG00000018608	zgc:153215	99	30.784	ENSOMEG00000022523	rbm12b	71	30.784	Oryzias_melastigma
ENSPREG00000018608	zgc:153215	99	44.603	ENSOMEG00000004220	zgc:153215	96	44.603	Oryzias_melastigma
ENSPREG00000018608	zgc:153215	99	30.814	ENSPTRG00000020420	RBM12B	55	30.814	Pan_troglodytes
ENSPREG00000018608	zgc:153215	99	30.344	ENSPANG00000035535	RBM12B	55	30.344	Papio_anubis
ENSPREG00000018608	zgc:153215	99	31.028	ENSPKIG00000018719	rbm12b	73	31.028	Paramormyrops_kingsleyae
ENSPREG00000018608	zgc:153215	99	36.770	ENSPKIG00000014851	zgc:153215	99	36.770	Paramormyrops_kingsleyae
ENSPREG00000018608	zgc:153215	99	30.255	ENSPSIG00000001348	RBM12B	72	30.255	Pelodiscus_sinensis
ENSPREG00000018608	zgc:153215	99	31.599	ENSPCIG00000008556	RBM12B	67	31.818	Phascolarctos_cinereus
ENSPREG00000018608	zgc:153215	99	94.792	ENSPFOG00000017451	zgc:153215	79	94.792	Poecilia_formosa
ENSPREG00000018608	zgc:153215	100	82.046	ENSPLAG00000000232	zgc:153215	100	82.672	Poecilia_latipinna
ENSPREG00000018608	zgc:153215	100	79.749	ENSPMEG00000016662	zgc:153215	100	81.002	Poecilia_mexicana
ENSPREG00000018608	zgc:153215	99	30.604	ENSPVAG00000011803	RBM12B	52	30.604	Pteropus_vampyrus
ENSPREG00000018608	zgc:153215	99	43.902	ENSPNYG00000018125	zgc:153215	97	43.902	Pundamilia_nyererei
ENSPREG00000018608	zgc:153215	99	30.636	ENSPNAG00000008126	rbm12b	72	30.829	Pygocentrus_nattereri
ENSPREG00000018608	zgc:153215	100	35.536	ENSPNAG00000025628	zgc:153215	99	35.536	Pygocentrus_nattereri
ENSPREG00000018608	zgc:153215	99	30.077	ENSRNOG00000016330	Rbm12b	58	30.077	Rattus_norvegicus
ENSPREG00000018608	zgc:153215	99	30.077	ENSRNOG00000055292	LOC679087	65	30.077	Rattus_norvegicus
ENSPREG00000018608	zgc:153215	99	30.409	ENSRBIG00000035046	RBM12B	64	30.409	Rhinopithecus_bieti
ENSPREG00000018608	zgc:153215	99	30.460	ENSRROG00000023660	RBM12B	58	30.460	Rhinopithecus_roxellana
ENSPREG00000018608	zgc:153215	99	30.975	ENSSHAG00000015335	RBM12B	67	31.203	Sarcophilus_harrisii
ENSPREG00000018608	zgc:153215	99	31.599	ENSSFOG00015001584	rbm12b	73	31.599	Scleropages_formosus
ENSPREG00000018608	zgc:153215	99	37.475	ENSSFOG00015009427	zgc:153215	99	37.475	Scleropages_formosus
ENSPREG00000018608	zgc:153215	100	47.937	ENSSMAG00000019013	zgc:153215	97	47.937	Scophthalmus_maximus
ENSPREG00000018608	zgc:153215	99	30.975	ENSSMAG00000019708	rbm12b	74	30.975	Scophthalmus_maximus
ENSPREG00000018608	zgc:153215	100	49.503	ENSSDUG00000012545	zgc:153215	99	49.901	Seriola_dumerili
ENSPREG00000018608	zgc:153215	100	45.890	ENSSLDG00000013581	zgc:153215	99	45.890	Seriola_lalandi_dorsalis
ENSPREG00000018608	zgc:153215	99	31.309	ENSSARG00000011845	-	67	31.309	Sorex_araneus
ENSPREG00000018608	zgc:153215	99	42.970	ENSSPAG00000023584	zgc:153215	98	43.762	Stegastes_partitus
ENSPREG00000018608	zgc:153215	99	30.137	ENSTRUG00000013738	rbm12b	74	30.196	Takifugu_rubripes
ENSPREG00000018608	zgc:153215	81	47.595	ENSTNIG00000018374	-	99	47.595	Tetraodon_nigroviridis
ENSPREG00000018608	zgc:153215	100	30.315	ENSXETG00000014696	rbm12b	68	30.315	Xenopus_tropicalis
ENSPREG00000018608	zgc:153215	99	89.749	ENSXCOG00000019654	zgc:153215	98	89.749	Xiphophorus_couchianus
ENSPREG00000018608	zgc:153215	99	66.042	ENSXMAG00000013169	-	97	66.042	Xiphophorus_maculatus