EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000018669 (Gene tree)
Gene ID: 103468491
Gene Symbol: si:ch211-256m1.8
Alias: -
Full Name: uncharacterized LOC103468491
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 5377 bases
Position: chrLG8:9067352-9072728
Accession: 103468491
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000027591	tRNA-synt_2	PF00152.20	1.6e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000027891	-	4734	XM_008415607	ENSPREP00000027591	1577 (aa)	XP_008413829	UPI0004A38DD3

Gene Model

Click here to download ENSPREG00000018669's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret00250	Alanine, aspartate and glutamate metabolism	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000018669's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000018669	si:ch211-256m1.8	100	76.879	ENSAPOG00000007012	si:ch211-256m1.8	100	76.879	Acanthochromis_polyacanthus
ENSPREG00000018669	si:ch211-256m1.8	100	76.943	ENSAOCG00000012258	si:ch211-256m1.8	100	76.943	Amphiprion_ocellaris
ENSPREG00000018669	si:ch211-256m1.8	100	76.943	ENSAPEG00000002724	si:ch211-256m1.8	100	76.943	Amphiprion_percula
ENSPREG00000018669	si:ch211-256m1.8	100	77.764	ENSATEG00000006278	si:ch211-256m1.8	100	77.764	Anabas_testudineus
ENSPREG00000018669	si:ch211-256m1.8	100	77.322	ENSACLG00000011503	si:ch211-256m1.8	100	77.322	Astatotilapia_calliptera
ENSPREG00000018669	si:ch211-256m1.8	100	67.837	ENSAMXG00000038245	si:ch211-256m1.8	100	67.837	Astyanax_mexicanus
ENSPREG00000018669	si:ch211-256m1.8	100	73.191	ENSCSEG00000006255	si:ch211-256m1.8	100	73.191	Cynoglossus_semilaevis
ENSPREG00000018669	si:ch211-256m1.8	100	87.650	ENSCVAG00000003376	si:ch211-256m1.8	100	87.650	Cyprinodon_variegatus
ENSPREG00000018669	si:ch211-256m1.8	100	65.972	ENSDARG00000055172	si:ch211-256m1.8	100	65.972	Danio_rerio
ENSPREG00000018669	si:ch211-256m1.8	100	68.316	ENSELUG00000010546	si:ch211-256m1.8	100	68.316	Esox_lucius
ENSPREG00000018669	si:ch211-256m1.8	100	86.004	ENSFHEG00000005847	si:ch211-256m1.8	100	86.004	Fundulus_heteroclitus
ENSPREG00000018669	si:ch211-256m1.8	100	94.230	ENSGAFG00000010269	si:ch211-256m1.8	100	94.230	Gambusia_affinis
ENSPREG00000018669	si:ch211-256m1.8	100	77.511	ENSHBUG00000014407	si:ch211-256m1.8	100	77.511	Haplochromis_burtoni
ENSPREG00000018669	si:ch211-256m1.8	100	71.628	ENSHCOG00000006884	si:ch211-256m1.8	100	72.189	Hippocampus_comes
ENSPREG00000018669	si:ch211-256m1.8	100	65.639	ENSIPUG00000022659	si:ch211-256m1.8	100	65.639	Ictalurus_punctatus
ENSPREG00000018669	si:ch211-256m1.8	100	80.557	ENSKMAG00000016377	si:ch211-256m1.8	100	80.557	Kryptolebias_marmoratus
ENSPREG00000018669	si:ch211-256m1.8	100	77.953	ENSLBEG00000010639	si:ch211-256m1.8	100	77.953	Labrus_bergylta
ENSPREG00000018669	si:ch211-256m1.8	100	59.139	ENSLOCG00000011127	si:ch211-256m1.8	100	59.139	Lepisosteus_oculatus
ENSPREG00000018669	si:ch211-256m1.8	99	76.474	ENSMAMG00000005651	si:ch211-256m1.8	99	76.474	Mastacembelus_armatus
ENSPREG00000018669	si:ch211-256m1.8	100	77.385	ENSMZEG00005006924	si:ch211-256m1.8	100	77.385	Maylandia_zebra
ENSPREG00000018669	si:ch211-256m1.8	100	73.174	ENSMMOG00000001736	si:ch211-256m1.8	100	73.174	Mola_mola
ENSPREG00000018669	si:ch211-256m1.8	100	77.322	ENSNBRG00000005143	si:ch211-256m1.8	100	77.322	Neolamprologus_brichardi
ENSPREG00000018669	si:ch211-256m1.8	100	75.823	ENSORLG00000022248	si:ch211-256m1.8	100	75.823	Oryzias_latipes
ENSPREG00000018669	si:ch211-256m1.8	100	75.570	ENSORLG00020000214	si:ch211-256m1.8	100	75.570	Oryzias_latipes_hni
ENSPREG00000018669	si:ch211-256m1.8	100	75.427	ENSORLG00015020297	si:ch211-256m1.8	100	75.427	Oryzias_latipes_hsok
ENSPREG00000018669	si:ch211-256m1.8	100	76.251	ENSOMEG00000004519	si:ch211-256m1.8	100	76.251	Oryzias_melastigma
ENSPREG00000018669	si:ch211-256m1.8	95	67.103	ENSPKIG00000007399	si:ch211-256m1.8	99	67.103	Paramormyrops_kingsleyae
ENSPREG00000018669	si:ch211-256m1.8	100	66.982	ENSPMGG00000007698	si:ch211-256m1.8	100	66.982	Periophthalmus_magnuspinnatus
ENSPREG00000018669	si:ch211-256m1.8	100	96.956	ENSPFOG00000005178	si:ch211-256m1.8	100	96.956	Poecilia_formosa
ENSPREG00000018669	si:ch211-256m1.8	100	96.829	ENSPLAG00000006872	si:ch211-256m1.8	100	96.829	Poecilia_latipinna
ENSPREG00000018669	si:ch211-256m1.8	100	96.766	ENSPMEG00000021815	si:ch211-256m1.8	100	96.766	Poecilia_mexicana
ENSPREG00000018669	si:ch211-256m1.8	100	77.385	ENSPNYG00000018038	si:ch211-256m1.8	100	77.385	Pundamilia_nyererei
ENSPREG00000018669	si:ch211-256m1.8	99	67.902	ENSPNAG00000003552	si:ch211-256m1.8	99	67.965	Pygocentrus_nattereri
ENSPREG00000018669	si:ch211-256m1.8	99	66.646	ENSPNAG00000018965	-	99	66.646	Pygocentrus_nattereri
ENSPREG00000018669	si:ch211-256m1.8	100	64.695	ENSSFOG00015008344	si:ch211-256m1.8	100	64.695	Scleropages_formosus
ENSPREG00000018669	si:ch211-256m1.8	100	77.637	ENSSMAG00000007562	si:ch211-256m1.8	100	77.637	Scophthalmus_maximus
ENSPREG00000018669	si:ch211-256m1.8	100	79.607	ENSSDUG00000018180	si:ch211-256m1.8	100	79.607	Seriola_dumerili
ENSPREG00000018669	si:ch211-256m1.8	100	79.671	ENSSLDG00000020310	si:ch211-256m1.8	100	79.671	Seriola_lalandi_dorsalis
ENSPREG00000018669	si:ch211-256m1.8	100	77.385	ENSSPAG00000013419	si:ch211-256m1.8	100	77.385	Stegastes_partitus
ENSPREG00000018669	si:ch211-256m1.8	100	68.139	ENSTRUG00000023803	si:ch211-256m1.8	100	68.139	Takifugu_rubripes
ENSPREG00000018669	si:ch211-256m1.8	100	94.610	ENSXCOG00000017726	si:ch211-256m1.8	100	94.610	Xiphophorus_couchianus
ENSPREG00000018669	si:ch211-256m1.8	100	94.673	ENSXMAG00000026576	si:ch211-256m1.8	100	94.673	Xiphophorus_maculatus