EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000018758 (Gene tree)
Gene ID: 103475136
Gene Symbol: sbds
Alias: zgc:56700
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 3028 bases
Position: chrLG13:31019507-31022534
Accession: 103475136
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000027723	SBDS	PF01172.18	6.3e-34	1	1
ENSPREP00000027723	SBDS_C	PF09377.10	3.6e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000028029	-	750	XM_008426552	ENSPREP00000027723	249 (aa)	XP_008424774	UPI0004A4560A

Gene Model

Click here to download ENSPREG00000018758's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000018758's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000018758	sbds	100	80.321	ENSG00000126524	SBDS	97	87.952	Homo_sapiens
ENSPREG00000018758	sbds	100	93.574	ENSAPOG00000014285	sbds	100	93.574	Acanthochromis_polyacanthus
ENSPREG00000018758	sbds	100	80.321	ENSAMEG00000018167	SBDS	99	80.321	Ailuropoda_melanoleuca
ENSPREG00000018758	sbds	100	93.651	ENSACIG00000007308	sbds	100	93.651	Amphilophus_citrinellus
ENSPREG00000018758	sbds	100	93.976	ENSAOCG00000016770	sbds	100	93.976	Amphiprion_ocellaris
ENSPREG00000018758	sbds	100	94.378	ENSAPEG00000015897	sbds	100	94.378	Amphiprion_percula
ENSPREG00000018758	sbds	100	92.771	ENSATEG00000006901	sbds	100	92.771	Anabas_testudineus
ENSPREG00000018758	sbds	93	73.593	ENSANAG00000024342	-	95	78.313	Aotus_nancymaae
ENSPREG00000018758	sbds	83	78.641	ENSANAG00000037501	-	99	78.641	Aotus_nancymaae
ENSPREG00000018758	sbds	100	93.976	ENSACLG00000018750	sbds	100	93.976	Astatotilapia_calliptera
ENSPREG00000018758	sbds	100	85.944	ENSAMXG00000005361	sbds	99	85.944	Astyanax_mexicanus
ENSPREG00000018758	sbds	100	80.723	ENSBTAG00000004051	SBDS	99	80.723	Bos_taurus
ENSPREG00000018758	sbds	98	58.943	WBGene00021063	sbds-1	97	58.537	Caenorhabditis_elegans
ENSPREG00000018758	sbds	100	80.321	ENSCJAG00000041007	SBDS	99	80.321	Callithrix_jacchus
ENSPREG00000018758	sbds	100	78.486	ENSCAFG00000010797	SBDS	99	78.486	Canis_familiaris
ENSPREG00000018758	sbds	100	80.321	ENSCAFG00020005357	SBDS	99	80.321	Canis_lupus_dingo
ENSPREG00000018758	sbds	100	80.723	ENSCHIG00000026854	SBDS	99	80.723	Capra_hircus
ENSPREG00000018758	sbds	100	80.321	ENSTSYG00000033822	SBDS	99	80.321	Carlito_syrichta
ENSPREG00000018758	sbds	65	77.914	ENSCAPG00000006634	SBDS	99	77.914	Cavia_aperea
ENSPREG00000018758	sbds	100	81.526	ENSCPOG00000036143	SBDS	99	81.526	Cavia_porcellus
ENSPREG00000018758	sbds	100	80.321	ENSCCAG00000020671	SBDS	93	87.952	Cebus_capucinus
ENSPREG00000018758	sbds	100	80.321	ENSCATG00000039026	SBDS	99	80.321	Cercocebus_atys
ENSPREG00000018758	sbds	99	58.065	ENSCLAG00000002113	-	99	58.065	Chinchilla_lanigera
ENSPREG00000018758	sbds	100	81.928	ENSCLAG00000005721	-	99	81.928	Chinchilla_lanigera
ENSPREG00000018758	sbds	100	80.321	ENSCSAG00000018275	SBDS	99	80.321	Chlorocebus_sabaeus
ENSPREG00000018758	sbds	100	75.904	ENSCHOG00000003795	SBDS	99	75.904	Choloepus_hoffmanni
ENSPREG00000018758	sbds	100	83.936	ENSCPBG00000014893	SBDS	99	83.936	Chrysemys_picta_bellii
ENSPREG00000018758	sbds	99	67.742	ENSCSAVG00000011811	-	99	67.742	Ciona_savignyi
ENSPREG00000018758	sbds	100	79.920	ENSCANG00000032368	SBDS	99	79.920	Colobus_angolensis_palliatus
ENSPREG00000018758	sbds	65	77.914	ENSCGRG00001019886	Sbds	99	77.914	Cricetulus_griseus_chok1gshd
ENSPREG00000018758	sbds	83	80.097	ENSCGRG00000009211	Sbds	99	80.097	Cricetulus_griseus_crigri
ENSPREG00000018758	sbds	100	91.165	ENSCSEG00000005798	sbds	100	91.165	Cynoglossus_semilaevis
ENSPREG00000018758	sbds	100	94.779	ENSCVAG00000001053	sbds	100	94.779	Cyprinodon_variegatus
ENSPREG00000018758	sbds	100	85.141	ENSDARG00000027803	sbds	99	85.141	Danio_rerio
ENSPREG00000018758	sbds	100	80.723	ENSDNOG00000041174	SBDS	99	80.723	Dasypus_novemcinctus
ENSPREG00000018758	sbds	100	82.731	ENSDORG00000026218	Sbds	99	82.731	Dipodomys_ordii
ENSPREG00000018758	sbds	91	63.158	FBgn0035714	CG8549	98	61.943	Drosophila_melanogaster
ENSPREG00000018758	sbds	93	59.483	ENSEBUG00000015780	sbds	99	59.483	Eptatretus_burgeri
ENSPREG00000018758	sbds	100	80.321	ENSEASG00005008821	SBDS	99	80.321	Equus_asinus_asinus
ENSPREG00000018758	sbds	100	80.321	ENSECAG00000008202	SBDS	99	80.321	Equus_caballus
ENSPREG00000018758	sbds	84	60.096	ENSEEUG00000004768	SBDS	95	61.421	Erinaceus_europaeus
ENSPREG00000018758	sbds	100	87.149	ENSELUG00000008382	sbds	99	87.149	Esox_lucius
ENSPREG00000018758	sbds	100	80.321	ENSFCAG00000022142	SBDS	99	80.321	Felis_catus
ENSPREG00000018758	sbds	100	85.944	ENSFALG00000013808	SBDS	99	85.944	Ficedula_albicollis
ENSPREG00000018758	sbds	100	81.526	ENSFDAG00000018947	-	99	81.526	Fukomys_damarensis
ENSPREG00000018758	sbds	100	91.165	ENSFHEG00000000708	sbds	100	91.165	Fundulus_heteroclitus
ENSPREG00000018758	sbds	100	87.149	ENSGMOG00000018356	sbds	99	87.149	Gadus_morhua
ENSPREG00000018758	sbds	100	82.731	ENSGALG00000027989	SBDS	99	82.731	Gallus_gallus
ENSPREG00000018758	sbds	92	96.087	ENSGAFG00000014204	sbds	100	96.087	Gambusia_affinis
ENSPREG00000018758	sbds	100	87.550	ENSGACG00000012697	sbds	100	87.550	Gasterosteus_aculeatus
ENSPREG00000018758	sbds	86	84.038	ENSGAGG00000022402	SBDS	99	84.038	Gopherus_agassizii
ENSPREG00000018758	sbds	96	62.083	ENSGGOG00000040023	-	92	62.083	Gorilla_gorilla
ENSPREG00000018758	sbds	100	93.976	ENSHBUG00000002660	sbds	100	93.976	Haplochromis_burtoni
ENSPREG00000018758	sbds	100	79.920	ENSHGLG00000009671	SBDS	99	79.920	Heterocephalus_glaber_female
ENSPREG00000018758	sbds	100	79.920	ENSHGLG00100011332	SBDS	99	79.920	Heterocephalus_glaber_male
ENSPREG00000018758	sbds	100	87.550	ENSHCOG00000018606	sbds	100	87.550	Hippocampus_comes
ENSPREG00000018758	sbds	100	85.542	ENSIPUG00000006536	sbds	99	85.542	Ictalurus_punctatus
ENSPREG00000018758	sbds	99	78.947	ENSJJAG00000012033	-	99	78.947	Jaculus_jaculus
ENSPREG00000018758	sbds	100	58.333	ENSJJAG00000003934	-	99	58.800	Jaculus_jaculus
ENSPREG00000018758	sbds	100	95.181	ENSKMAG00000018542	sbds	100	95.181	Kryptolebias_marmoratus
ENSPREG00000018758	sbds	100	90.763	ENSLBEG00000016687	sbds	100	90.763	Labrus_bergylta
ENSPREG00000018758	sbds	100	71.146	ENSLACG00000018916	SBDS	99	71.146	Latimeria_chalumnae
ENSPREG00000018758	sbds	100	85.944	ENSLOCG00000004073	sbds	99	85.944	Lepisosteus_oculatus
ENSPREG00000018758	sbds	100	80.723	ENSLAFG00000008763	SBDS	99	80.723	Loxodonta_africana
ENSPREG00000018758	sbds	100	80.321	ENSMFAG00000032620	SBDS	99	80.321	Macaca_fascicularis
ENSPREG00000018758	sbds	100	80.321	ENSMMUG00000045653	SBDS	99	80.321	Macaca_mulatta
ENSPREG00000018758	sbds	100	80.321	ENSMNEG00000031523	SBDS	99	80.321	Macaca_nemestrina
ENSPREG00000018758	sbds	100	64.822	ENSMLEG00000036826	SBDS	99	64.032	Mandrillus_leucophaeus
ENSPREG00000018758	sbds	100	93.173	ENSMAMG00000016062	sbds	100	93.173	Mastacembelus_armatus
ENSPREG00000018758	sbds	100	93.976	ENSMZEG00005024385	sbds	100	93.976	Maylandia_zebra
ENSPREG00000018758	sbds	100	82.731	ENSMGAG00000002119	SBDS	99	82.731	Meleagris_gallopavo
ENSPREG00000018758	sbds	100	67.470	ENSMAUG00000022214	-	100	67.470	Mesocricetus_auratus
ENSPREG00000018758	sbds	100	80.723	ENSMICG00000014366	SBDS	99	80.723	Microcebus_murinus
ENSPREG00000018758	sbds	100	81.124	ENSMOCG00000011739	Sbds	99	81.124	Microtus_ochrogaster
ENSPREG00000018758	sbds	100	81.600	ENSMMOG00000005061	sbds	100	82.000	Mola_mola
ENSPREG00000018758	sbds	100	81.928	ENSMODG00000006644	SBDS	99	81.928	Monodelphis_domestica
ENSPREG00000018758	sbds	100	88.755	ENSMALG00000010219	sbds	100	88.755	Monopterus_albus
ENSPREG00000018758	sbds	100	81.928	MGP_CAROLIEiJ_G0027800	Sbds	98	92.857	Mus_caroli
ENSPREG00000018758	sbds	100	82.329	ENSMUSG00000025337	Sbds	98	92.857	Mus_musculus
ENSPREG00000018758	sbds	100	81.928	MGP_PahariEiJ_G0024384	Sbds	98	92.857	Mus_pahari
ENSPREG00000018758	sbds	100	82.329	MGP_SPRETEiJ_G0028798	Sbds	98	92.857	Mus_spretus
ENSPREG00000018758	sbds	67	80.240	ENSMPUG00000016192	SBDS	96	80.240	Mustela_putorius_furo
ENSPREG00000018758	sbds	73	74.586	ENSMLUG00000013575	SBDS	99	74.586	Myotis_lucifugus
ENSPREG00000018758	sbds	100	81.928	ENSNGAG00000012093	Sbds	99	81.928	Nannospalax_galili
ENSPREG00000018758	sbds	100	93.976	ENSNBRG00000017027	sbds	100	93.976	Neolamprologus_brichardi
ENSPREG00000018758	sbds	100	80.321	ENSNLEG00000013288	SBDS	99	80.321	Nomascus_leucogenys
ENSPREG00000018758	sbds	100	81.526	ENSOPRG00000008721	SBDS	99	81.526	Ochotona_princeps
ENSPREG00000018758	sbds	100	63.454	ENSODEG00000001116	-	99	63.454	Octodon_degus
ENSPREG00000018758	sbds	100	61.446	ENSODEG00000000137	-	84	63.855	Octodon_degus
ENSPREG00000018758	sbds	100	73.896	ENSODEG00000019253	-	84	73.896	Octodon_degus
ENSPREG00000018758	sbds	100	93.976	ENSONIG00000005874	sbds	100	93.976	Oreochromis_niloticus
ENSPREG00000018758	sbds	83	78.155	ENSOANG00000007674	-	99	78.922	Ornithorhynchus_anatinus
ENSPREG00000018758	sbds	100	82.329	ENSOCUG00000003170	SBDS	99	82.329	Oryctolagus_cuniculus
ENSPREG00000018758	sbds	100	91.165	ENSORLG00000023489	sbds	100	91.165	Oryzias_latipes
ENSPREG00000018758	sbds	100	91.165	ENSORLG00020019282	sbds	100	91.165	Oryzias_latipes_hni
ENSPREG00000018758	sbds	100	91.165	ENSORLG00015008005	sbds	100	91.165	Oryzias_latipes_hsok
ENSPREG00000018758	sbds	100	92.369	ENSOMEG00000022747	sbds	100	92.369	Oryzias_melastigma
ENSPREG00000018758	sbds	100	69.478	ENSOGAG00000015036	-	99	69.478	Otolemur_garnettii
ENSPREG00000018758	sbds	100	81.124	ENSOGAG00000009011	-	99	81.124	Otolemur_garnettii
ENSPREG00000018758	sbds	100	80.723	ENSOARG00000010609	SBDS	99	80.723	Ovis_aries
ENSPREG00000018758	sbds	100	79.518	ENSPPAG00000043889	-	99	79.518	Pan_paniscus
ENSPREG00000018758	sbds	100	80.321	ENSPPRG00000002307	SBDS	99	80.321	Panthera_pardus
ENSPREG00000018758	sbds	100	80.321	ENSPTIG00000021308	SBDS	99	80.321	Panthera_tigris_altaica
ENSPREG00000018758	sbds	87	77.880	ENSPTRG00000048174	-	88	81.726	Pan_troglodytes
ENSPREG00000018758	sbds	100	66.667	ENSPTRG00000047744	-	99	66.667	Pan_troglodytes
ENSPREG00000018758	sbds	100	66.667	ENSPTRG00000050835	-	99	66.667	Pan_troglodytes
ENSPREG00000018758	sbds	100	80.321	ENSPTRG00000019254	SBDS	99	80.321	Pan_troglodytes
ENSPREG00000018758	sbds	100	80.321	ENSPANG00000004078	SBDS	99	80.321	Papio_anubis
ENSPREG00000018758	sbds	100	88.353	ENSPKIG00000006489	sbds	99	88.353	Paramormyrops_kingsleyae
ENSPREG00000018758	sbds	83	81.159	ENSPSIG00000014603	SBDS	99	81.159	Pelodiscus_sinensis
ENSPREG00000018758	sbds	100	93.976	ENSPMGG00000004246	sbds	100	93.976	Periophthalmus_magnuspinnatus
ENSPREG00000018758	sbds	100	81.928	ENSPEMG00000008728	Sbds	99	81.928	Peromyscus_maniculatus_bairdii
ENSPREG00000018758	sbds	100	82.329	ENSPCIG00000029718	SBDS	99	82.329	Phascolarctos_cinereus
ENSPREG00000018758	sbds	100	98.394	ENSPFOG00000015837	sbds	100	98.394	Poecilia_formosa
ENSPREG00000018758	sbds	100	98.795	ENSPLAG00000003641	sbds	100	98.795	Poecilia_latipinna
ENSPREG00000018758	sbds	100	98.394	ENSPMEG00000019483	sbds	100	98.394	Poecilia_mexicana
ENSPREG00000018758	sbds	100	80.321	ENSPPYG00000017513	SBDS	99	80.321	Pongo_abelii
ENSPREG00000018758	sbds	100	80.321	ENSPCOG00000021098	SBDS	99	80.321	Propithecus_coquereli
ENSPREG00000018758	sbds	100	80.723	ENSPVAG00000009369	SBDS	99	80.723	Pteropus_vampyrus
ENSPREG00000018758	sbds	100	93.574	ENSPNYG00000022403	sbds	100	93.574	Pundamilia_nyererei
ENSPREG00000018758	sbds	100	88.353	ENSPNAG00000001120	sbds	99	88.353	Pygocentrus_nattereri
ENSPREG00000018758	sbds	100	81.928	ENSRNOG00000000888	Sbds	99	81.928	Rattus_norvegicus
ENSPREG00000018758	sbds	100	80.321	ENSRBIG00000035557	SBDS	99	80.321	Rhinopithecus_bieti
ENSPREG00000018758	sbds	100	66.667	ENSRROG00000041986	-	99	66.667	Rhinopithecus_roxellana
ENSPREG00000018758	sbds	100	80.321	ENSRROG00000040842	-	99	80.321	Rhinopithecus_roxellana
ENSPREG00000018758	sbds	96	42.683	YLR022C	-	96	42.683	Saccharomyces_cerevisiae
ENSPREG00000018758	sbds	93	78.355	ENSSBOG00000022460	SBDS	99	78.355	Saimiri_boliviensis_boliviensis
ENSPREG00000018758	sbds	100	70.683	ENSSHAG00000010263	SBDS	99	70.683	Sarcophilus_harrisii
ENSPREG00000018758	sbds	100	88.755	ENSSFOG00015001108	sbds	99	88.755	Scleropages_formosus
ENSPREG00000018758	sbds	100	91.165	ENSSMAG00000020506	sbds	100	91.165	Scophthalmus_maximus
ENSPREG00000018758	sbds	100	92.369	ENSSDUG00000001528	sbds	100	92.369	Seriola_dumerili
ENSPREG00000018758	sbds	100	92.369	ENSSLDG00000003659	sbds	100	92.369	Seriola_lalandi_dorsalis
ENSPREG00000018758	sbds	61	86.275	ENSSARG00000013132	-	100	86.275	Sorex_araneus
ENSPREG00000018758	sbds	73	89.535	ENSSARG00000001899	-	73	89.535	Sorex_araneus
ENSPREG00000018758	sbds	100	81.124	ENSSPUG00000002699	SBDS	99	81.124	Sphenodon_punctatus
ENSPREG00000018758	sbds	100	94.378	ENSSPAG00000016419	sbds	100	86.400	Stegastes_partitus
ENSPREG00000018758	sbds	100	80.723	ENSSSCG00000007732	SBDS	99	80.723	Sus_scrofa
ENSPREG00000018758	sbds	66	84.146	ENSTGUG00000003426	SBDS	99	84.146	Taeniopygia_guttata
ENSPREG00000018758	sbds	100	92.771	ENSTRUG00000021443	sbds	100	92.771	Takifugu_rubripes
ENSPREG00000018758	sbds	100	91.566	ENSTNIG00000019000	sbds	100	91.566	Tetraodon_nigroviridis
ENSPREG00000018758	sbds	84	69.231	ENSTBEG00000001178	SBDS	94	70.558	Tupaia_belangeri
ENSPREG00000018758	sbds	100	63.454	ENSTTRG00000003921	SBDS	99	63.454	Tursiops_truncatus
ENSPREG00000018758	sbds	100	80.321	ENSUAMG00000001326	SBDS	99	80.321	Ursus_americanus
ENSPREG00000018758	sbds	100	80.321	ENSUMAG00000015353	SBDS	99	80.321	Ursus_maritimus
ENSPREG00000018758	sbds	100	80.321	ENSVVUG00000016478	SBDS	99	80.321	Vulpes_vulpes
ENSPREG00000018758	sbds	100	83.534	ENSXETG00000010093	sbds	99	83.534	Xenopus_tropicalis
ENSPREG00000018758	sbds	100	85.944	ENSXCOG00000010639	sbds	100	85.944	Xiphophorus_couchianus
ENSPREG00000018758	sbds	100	97.992	ENSXMAG00000006065	sbds	100	97.992	Xiphophorus_maculatus