EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000018793 (Gene tree)
Gene ID: 103466729
Gene Symbol: cnot1
Alias: -
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 24571 bases
Position: chrLG6:29007282-29031852
Accession: 103466729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000027855	Not1	PF04054.15	3.5e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000028161	-	6741	XM_008412521	ENSPREP00000027855	2246 (aa)	XP_008410743	-

Gene Model

Click here to download ENSPREG00000018793's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000018793's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000018793	cnot1	100	96.008	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSPREG00000018793	cnot1	100	98.204	ENSAPOG00000005042	cnot1	95	98.204	Acanthochromis_polyacanthus
ENSPREG00000018793	cnot1	100	96.008	ENSAMEG00000017298	CNOT1	95	96.008	Ailuropoda_melanoleuca
ENSPREG00000018793	cnot1	89	99.380	ENSACIG00000016003	cnot1	94	99.380	Amphilophus_citrinellus
ENSPREG00000018793	cnot1	100	98.204	ENSAPEG00000022342	cnot1	95	98.204	Amphiprion_percula
ENSPREG00000018793	cnot1	100	98.204	ENSATEG00000012892	cnot1	95	98.204	Anabas_testudineus
ENSPREG00000018793	cnot1	100	94.622	ENSAPLG00000007162	CNOT1	95	96.016	Anas_platyrhynchos
ENSPREG00000018793	cnot1	90	93.571	ENSACAG00000001602	CNOT1	93	93.571	Anolis_carolinensis
ENSPREG00000018793	cnot1	100	88.011	ENSANAG00000038198	CNOT1	95	87.955	Aotus_nancymaae
ENSPREG00000018793	cnot1	100	98.204	ENSACLG00000014234	cnot1	95	98.204	Astatotilapia_calliptera
ENSPREG00000018793	cnot1	100	98.004	ENSAMXG00000013170	cnot1	95	98.004	Astyanax_mexicanus
ENSPREG00000018793	cnot1	100	96.008	ENSBTAG00000020782	CNOT1	95	96.008	Bos_taurus
ENSPREG00000018793	cnot1	76	53.571	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSPREG00000018793	cnot1	100	96.008	ENSCJAG00000011318	CNOT1	95	96.008	Callithrix_jacchus
ENSPREG00000018793	cnot1	100	96.008	ENSCAFG00000008426	CNOT1	95	96.008	Canis_familiaris
ENSPREG00000018793	cnot1	100	93.763	ENSCAFG00020010156	CNOT1	100	89.778	Canis_lupus_dingo
ENSPREG00000018793	cnot1	100	96.008	ENSCHIG00000010452	CNOT1	95	96.008	Capra_hircus
ENSPREG00000018793	cnot1	100	96.008	ENSTSYG00000006888	CNOT1	95	96.008	Carlito_syrichta
ENSPREG00000018793	cnot1	100	96.008	ENSCPOG00000013026	CNOT1	95	96.008	Cavia_porcellus
ENSPREG00000018793	cnot1	100	96.008	ENSCCAG00000026333	CNOT1	95	96.008	Cebus_capucinus
ENSPREG00000018793	cnot1	100	96.008	ENSCATG00000032625	CNOT1	95	96.008	Cercocebus_atys
ENSPREG00000018793	cnot1	100	96.008	ENSCLAG00000006289	CNOT1	95	96.008	Chinchilla_lanigera
ENSPREG00000018793	cnot1	100	96.008	ENSCSAG00000004731	CNOT1	95	96.008	Chlorocebus_sabaeus
ENSPREG00000018793	cnot1	79	97.527	ENSCHOG00000009712	CNOT1	77	97.527	Choloepus_hoffmanni
ENSPREG00000018793	cnot1	98	97.172	ENSCPBG00000026222	CNOT1	93	97.172	Chrysemys_picta_bellii
ENSPREG00000018793	cnot1	100	79.482	ENSCING00000009149	-	95	79.482	Ciona_intestinalis
ENSPREG00000018793	cnot1	89	79.559	ENSCSAVG00000002414	-	94	79.559	Ciona_savignyi
ENSPREG00000018793	cnot1	100	96.970	ENSCANG00000040534	CNOT1	94	96.970	Colobus_angolensis_palliatus
ENSPREG00000018793	cnot1	100	96.008	ENSCGRG00001016365	Cnot1	95	96.008	Cricetulus_griseus_chok1gshd
ENSPREG00000018793	cnot1	100	96.008	ENSCGRG00000001714	Cnot1	95	96.008	Cricetulus_griseus_crigri
ENSPREG00000018793	cnot1	97	98.802	ENSCVAG00000018930	cnot1	95	98.802	Cyprinodon_variegatus
ENSPREG00000018793	cnot1	100	97.405	ENSDARG00000004174	cnot1	95	97.405	Danio_rerio
ENSPREG00000018793	cnot1	100	92.032	ENSDNOG00000013250	CNOT1	95	92.032	Dasypus_novemcinctus
ENSPREG00000018793	cnot1	99	69.151	FBgn0085436	Not1	75	69.151	Drosophila_melanogaster
ENSPREG00000018793	cnot1	83	93.014	ENSETEG00000012806	CNOT1	79	92.644	Echinops_telfairi
ENSPREG00000018793	cnot1	80	73.715	ENSEBUG00000011534	cnot1	91	73.715	Eptatretus_burgeri
ENSPREG00000018793	cnot1	100	96.970	ENSEASG00005005819	CNOT1	95	96.008	Equus_asinus_asinus
ENSPREG00000018793	cnot1	100	96.008	ENSECAG00000009889	CNOT1	95	96.008	Equus_caballus
ENSPREG00000018793	cnot1	89	95.609	ENSEEUG00000006015	CNOT1	84	95.609	Erinaceus_europaeus
ENSPREG00000018793	cnot1	100	94.253	ENSELUG00000014085	cnot1	95	94.253	Esox_lucius
ENSPREG00000018793	cnot1	100	96.970	ENSFCAG00000025155	CNOT1	94	96.970	Felis_catus
ENSPREG00000018793	cnot1	100	96.008	ENSFALG00000007285	CNOT1	95	96.008	Ficedula_albicollis
ENSPREG00000018793	cnot1	100	96.008	ENSFDAG00000013399	CNOT1	95	96.008	Fukomys_damarensis
ENSPREG00000018793	cnot1	100	98.403	ENSFHEG00000020574	cnot1	95	98.403	Fundulus_heteroclitus
ENSPREG00000018793	cnot1	90	96.043	ENSGMOG00000012864	cnot1	94	96.043	Gadus_morhua
ENSPREG00000018793	cnot1	100	96.008	ENSGALG00000002301	CNOT1	95	96.008	Gallus_gallus
ENSPREG00000018793	cnot1	100	98.603	ENSGAFG00000015005	cnot1	95	98.603	Gambusia_affinis
ENSPREG00000018793	cnot1	90	96.751	ENSGACG00000002606	cnot1	94	96.751	Gasterosteus_aculeatus
ENSPREG00000018793	cnot1	100	96.208	ENSGAGG00000022646	CNOT1	95	96.208	Gopherus_agassizii
ENSPREG00000018793	cnot1	100	96.008	ENSGGOG00000009547	CNOT1	95	96.008	Gorilla_gorilla
ENSPREG00000018793	cnot1	100	98.204	ENSHBUG00000001729	cnot1	95	98.204	Haplochromis_burtoni
ENSPREG00000018793	cnot1	100	96.008	ENSHGLG00000014322	CNOT1	95	96.008	Heterocephalus_glaber_female
ENSPREG00000018793	cnot1	100	96.813	ENSHCOG00000006501	cnot1	95	96.813	Hippocampus_comes
ENSPREG00000018793	cnot1	100	95.866	ENSIPUG00000011915	cnot1	95	95.866	Ictalurus_punctatus
ENSPREG00000018793	cnot1	100	96.008	ENSSTOG00000005490	CNOT1	95	96.008	Ictidomys_tridecemlineatus
ENSPREG00000018793	cnot1	100	95.409	ENSJJAG00000000633	Cnot1	95	95.409	Jaculus_jaculus
ENSPREG00000018793	cnot1	100	98.204	ENSKMAG00000006149	cnot1	95	98.204	Kryptolebias_marmoratus
ENSPREG00000018793	cnot1	100	94.301	ENSLBEG00000004740	cnot1	100	94.657	Labrus_bergylta
ENSPREG00000018793	cnot1	100	96.208	ENSLACG00000010869	CNOT1	95	96.208	Latimeria_chalumnae
ENSPREG00000018793	cnot1	100	98.004	ENSLOCG00000006324	cnot1	95	98.004	Lepisosteus_oculatus
ENSPREG00000018793	cnot1	100	95.808	ENSLAFG00000000098	CNOT1	95	95.427	Loxodonta_africana
ENSPREG00000018793	cnot1	100	96.970	ENSMFAG00000035888	CNOT1	95	96.008	Macaca_fascicularis
ENSPREG00000018793	cnot1	100	96.008	ENSMMUG00000014625	CNOT1	94	98.545	Macaca_mulatta
ENSPREG00000018793	cnot1	100	96.970	ENSMNEG00000031820	CNOT1	94	96.970	Macaca_nemestrina
ENSPREG00000018793	cnot1	100	91.717	ENSMLEG00000040933	CNOT1	94	91.717	Mandrillus_leucophaeus
ENSPREG00000018793	cnot1	100	95.808	ENSMAMG00000016524	cnot1	95	95.808	Mastacembelus_armatus
ENSPREG00000018793	cnot1	100	98.204	ENSMZEG00005016210	cnot1	95	98.204	Maylandia_zebra
ENSPREG00000018793	cnot1	100	96.008	ENSMGAG00000001908	CNOT1	95	96.008	Meleagris_gallopavo
ENSPREG00000018793	cnot1	100	96.970	ENSMICG00000007071	CNOT1	95	96.008	Microcebus_murinus
ENSPREG00000018793	cnot1	100	96.008	ENSMOCG00000017969	Cnot1	95	96.008	Microtus_ochrogaster
ENSPREG00000018793	cnot1	100	93.413	ENSMMOG00000019134	cnot1	95	93.413	Mola_mola
ENSPREG00000018793	cnot1	100	94.622	ENSMODG00000014199	CNOT1	95	96.016	Monodelphis_domestica
ENSPREG00000018793	cnot1	100	98.004	ENSMALG00000008645	cnot1	95	98.004	Monopterus_albus
ENSPREG00000018793	cnot1	95	96.190	MGP_CAROLIEiJ_G0031430	Cnot1	87	96.190	Mus_caroli
ENSPREG00000018793	cnot1	100	96.008	ENSMUSG00000036550	Cnot1	95	96.008	Mus_musculus
ENSPREG00000018793	cnot1	100	96.008	MGP_PahariEiJ_G0023028	Cnot1	95	96.008	Mus_pahari
ENSPREG00000018793	cnot1	100	96.008	MGP_SPRETEiJ_G0032549	Cnot1	95	96.008	Mus_spretus
ENSPREG00000018793	cnot1	100	96.008	ENSMPUG00000004830	CNOT1	95	96.008	Mustela_putorius_furo
ENSPREG00000018793	cnot1	100	96.008	ENSMLUG00000003728	CNOT1	95	96.008	Myotis_lucifugus
ENSPREG00000018793	cnot1	100	96.008	ENSNGAG00000018628	Cnot1	95	96.008	Nannospalax_galili
ENSPREG00000018793	cnot1	96	97.813	ENSNBRG00000019358	cnot1	94	97.813	Neolamprologus_brichardi
ENSPREG00000018793	cnot1	100	96.008	ENSNLEG00000003566	CNOT1	95	96.008	Nomascus_leucogenys
ENSPREG00000018793	cnot1	86	90.972	ENSMEUG00000006145	CNOT1	83	90.972	Notamacropus_eugenii
ENSPREG00000018793	cnot1	85	97.778	ENSOPRG00000005604	CNOT1	81	97.778	Ochotona_princeps
ENSPREG00000018793	cnot1	100	96.008	ENSODEG00000016337	CNOT1	95	96.008	Octodon_degus
ENSPREG00000018793	cnot1	100	97.813	ENSONIG00000007358	cnot1	95	97.813	Oreochromis_niloticus
ENSPREG00000018793	cnot1	89	96.407	ENSOANG00000012109	CNOT1	94	96.407	Ornithorhynchus_anatinus
ENSPREG00000018793	cnot1	100	96.008	ENSOCUG00000006911	CNOT1	95	96.008	Oryctolagus_cuniculus
ENSPREG00000018793	cnot1	100	98.004	ENSORLG00000013734	cnot1	95	98.004	Oryzias_latipes
ENSPREG00000018793	cnot1	100	93.690	ENSORLG00020017012	cnot1	95	93.576	Oryzias_latipes_hni
ENSPREG00000018793	cnot1	100	93.633	ENSORLG00015007091	cnot1	95	93.519	Oryzias_latipes_hsok
ENSPREG00000018793	cnot1	100	92.509	ENSOMEG00000015124	cnot1	95	92.679	Oryzias_melastigma
ENSPREG00000018793	cnot1	100	96.008	ENSOGAG00000000543	CNOT1	95	96.008	Otolemur_garnettii
ENSPREG00000018793	cnot1	100	96.008	ENSOARG00000001567	CNOT1	95	96.008	Ovis_aries
ENSPREG00000018793	cnot1	100	96.970	ENSPPAG00000022013	CNOT1	95	96.008	Pan_paniscus
ENSPREG00000018793	cnot1	100	96.008	ENSPPRG00000004867	CNOT1	95	96.008	Panthera_pardus
ENSPREG00000018793	cnot1	100	96.008	ENSPTIG00000012589	CNOT1	95	96.008	Panthera_tigris_altaica
ENSPREG00000018793	cnot1	100	96.970	ENSPTRG00000008183	CNOT1	94	96.970	Pan_troglodytes
ENSPREG00000018793	cnot1	100	96.970	ENSPANG00000020901	CNOT1	95	96.008	Papio_anubis
ENSPREG00000018793	cnot1	100	94.036	ENSPKIG00000002914	CNOT1	95	94.036	Paramormyrops_kingsleyae
ENSPREG00000018793	cnot1	100	97.605	ENSPKIG00000023538	CNOT1	96	97.217	Paramormyrops_kingsleyae
ENSPREG00000018793	cnot1	100	96.208	ENSPSIG00000005499	CNOT1	95	96.208	Pelodiscus_sinensis
ENSPREG00000018793	cnot1	100	89.820	ENSPMAG00000009381	cnot1	95	89.463	Petromyzon_marinus
ENSPREG00000018793	cnot1	100	97.172	ENSPCIG00000007343	CNOT1	95	96.208	Phascolarctos_cinereus
ENSPREG00000018793	cnot1	99	98.190	ENSPFOG00000003497	cnot1	95	98.190	Poecilia_formosa
ENSPREG00000018793	cnot1	100	99.644	ENSPLAG00000014018	cnot1	100	99.644	Poecilia_latipinna
ENSPREG00000018793	cnot1	100	97.996	ENSPMEG00000005868	cnot1	100	97.996	Poecilia_mexicana
ENSPREG00000018793	cnot1	100	96.008	ENSPPYG00000007410	CNOT1	95	96.008	Pongo_abelii
ENSPREG00000018793	cnot1	90	86.861	ENSPCAG00000003241	CNOT1	85	86.861	Procavia_capensis
ENSPREG00000018793	cnot1	100	96.970	ENSPCOG00000027139	CNOT1	94	96.970	Propithecus_coquereli
ENSPREG00000018793	cnot1	100	87.330	ENSPVAG00000004243	CNOT1	95	87.898	Pteropus_vampyrus
ENSPREG00000018793	cnot1	100	98.204	ENSPNYG00000012919	cnot1	95	98.204	Pundamilia_nyererei
ENSPREG00000018793	cnot1	100	98.004	ENSPNAG00000000246	cnot1	95	98.004	Pygocentrus_nattereri
ENSPREG00000018793	cnot1	100	96.008	ENSRNOG00000012271	Cnot1	95	96.008	Rattus_norvegicus
ENSPREG00000018793	cnot1	100	96.970	ENSRBIG00000044598	CNOT1	94	96.970	Rhinopithecus_bieti
ENSPREG00000018793	cnot1	100	96.008	ENSRROG00000000906	CNOT1	95	96.008	Rhinopithecus_roxellana
ENSPREG00000018793	cnot1	55	30.309	YCR093W	CDC39	57	30.502	Saccharomyces_cerevisiae
ENSPREG00000018793	cnot1	100	91.417	ENSSBOG00000029155	CNOT1	94	91.417	Saimiri_boliviensis_boliviensis
ENSPREG00000018793	cnot1	100	96.208	ENSSHAG00000012187	CNOT1	95	96.208	Sarcophilus_harrisii
ENSPREG00000018793	cnot1	100	90.894	ENSSFOG00015017614	cnot1	95	90.837	Scleropages_formosus
ENSPREG00000018793	cnot1	100	98.204	ENSSMAG00000013844	cnot1	95	98.204	Scophthalmus_maximus
ENSPREG00000018793	cnot1	100	98.004	ENSSDUG00000021491	cnot1	95	98.004	Seriola_dumerili
ENSPREG00000018793	cnot1	100	98.004	ENSSLDG00000014816	cnot1	95	98.004	Seriola_lalandi_dorsalis
ENSPREG00000018793	cnot1	86	95.745	ENSSARG00000000762	CNOT1	85	95.745	Sorex_araneus
ENSPREG00000018793	cnot1	100	98.204	ENSSPAG00000018802	cnot1	95	98.204	Stegastes_partitus
ENSPREG00000018793	cnot1	100	96.970	ENSSSCG00000002799	CNOT1	95	96.008	Sus_scrofa
ENSPREG00000018793	cnot1	100	96.008	ENSTGUG00000005919	CNOT1	95	96.008	Taeniopygia_guttata
ENSPREG00000018793	cnot1	100	97.605	ENSTNIG00000018706	cnot1	95	97.605	Tetraodon_nigroviridis
ENSPREG00000018793	cnot1	79	98.592	ENSTBEG00000000720	CNOT1	75	98.592	Tupaia_belangeri
ENSPREG00000018793	cnot1	95	96.008	ENSTTRG00000008460	CNOT1	90	96.008	Tursiops_truncatus
ENSPREG00000018793	cnot1	100	96.008	ENSUAMG00000009251	CNOT1	95	96.008	Ursus_americanus
ENSPREG00000018793	cnot1	100	96.008	ENSUMAG00000021291	CNOT1	95	96.008	Ursus_maritimus
ENSPREG00000018793	cnot1	97	96.008	ENSVPAG00000008846	CNOT1	92	96.008	Vicugna_pacos
ENSPREG00000018793	cnot1	100	93.763	ENSVVUG00000024037	CNOT1	100	89.778	Vulpes_vulpes
ENSPREG00000018793	cnot1	100	97.374	ENSXETG00000015900	cnot1	95	97.374	Xenopus_tropicalis
ENSPREG00000018793	cnot1	100	98.802	ENSXCOG00000013552	cnot1	95	98.802	Xiphophorus_couchianus
ENSPREG00000018793	cnot1	100	98.802	ENSXMAG00000006031	cnot1	95	98.802	Xiphophorus_maculatus