EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000019241 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 13865 bases
Position: chrLG15:16405932-16419796
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000028427	zf-met	PF12874.7	7.1e-13	1	2
ENSPREP00000028427	zf-met	PF12874.7	7.1e-13	2	2
ENSPREP00000028427	zf-C2H2_jaz	PF12171.8	2.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000028739	-	417	-	ENSPREP00000028427	138 (aa)	-	-

Gene Model

Click here to download ENSPREG00000019241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000019241's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000019241	zgc:171482	89	52.525	ENSPREG00000005815	znf346	70	52.525
ENSPREG00000019241	zgc:171482	83	72.174	ENSPREG00000014914	zmat4a	65	72.174

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000019241	zgc:171482	93	93.798	ENSAPOG00000019970	zgc:171482	88	93.798	Acanthochromis_polyacanthus
ENSPREG00000019241	zgc:171482	87	97.500	ENSACIG00000021512	zgc:171482	90	97.500	Amphilophus_citrinellus
ENSPREG00000019241	zgc:171482	90	97.581	ENSAOCG00000000751	zgc:171482	91	97.581	Amphiprion_ocellaris
ENSPREG00000019241	zgc:171482	91	96.825	ENSAPEG00000014154	zgc:171482	91	96.825	Amphiprion_percula
ENSPREG00000019241	zgc:171482	83	98.261	ENSATEG00000001371	zgc:171482	79	95.041	Anabas_testudineus
ENSPREG00000019241	zgc:171482	91	96.032	ENSACLG00000010511	zgc:171482	88	96.032	Astatotilapia_calliptera
ENSPREG00000019241	zgc:171482	94	87.692	ENSAMXG00000002299	zgc:171482	95	87.692	Astyanax_mexicanus
ENSPREG00000019241	zgc:171482	100	83.333	ENSCSEG00000006509	zgc:171482	90	83.333	Cynoglossus_semilaevis
ENSPREG00000019241	zgc:171482	91	97.521	ENSCVAG00000013606	zgc:171482	89	97.521	Cyprinodon_variegatus
ENSPREG00000019241	zgc:171482	88	89.256	ENSDARG00000074415	zgc:171482	91	88.525	Danio_rerio
ENSPREG00000019241	zgc:171482	97	86.131	ENSELUG00000021817	zgc:171482	99	86.131	Esox_lucius
ENSPREG00000019241	zgc:171482	98	65.217	ENSELUG00000017517	-	60	85.393	Esox_lucius
ENSPREG00000019241	zgc:171482	99	93.431	ENSFHEG00000002233	zgc:171482	98	93.431	Fundulus_heteroclitus
ENSPREG00000019241	zgc:171482	91	95.200	ENSGMOG00000010508	zgc:171482	79	95.200	Gadus_morhua
ENSPREG00000019241	zgc:171482	87	99.167	ENSGAFG00000009398	zgc:171482	90	87.681	Gambusia_affinis
ENSPREG00000019241	zgc:171482	91	96.000	ENSGACG00000007680	zgc:171482	80	96.000	Gasterosteus_aculeatus
ENSPREG00000019241	zgc:171482	91	96.032	ENSHBUG00000023289	zgc:171482	95	96.032	Haplochromis_burtoni
ENSPREG00000019241	zgc:171482	90	91.270	ENSHCOG00000018086	zgc:171482	94	91.270	Hippocampus_comes
ENSPREG00000019241	zgc:171482	84	94.828	ENSIPUG00000000361	zgc:171482	84	94.828	Ictalurus_punctatus
ENSPREG00000019241	zgc:171482	92	95.276	ENSKMAG00000005077	zgc:171482	76	95.276	Kryptolebias_marmoratus
ENSPREG00000019241	zgc:171482	94	94.615	ENSLBEG00000023823	zgc:171482	93	94.615	Labrus_bergylta
ENSPREG00000019241	zgc:171482	88	90.909	ENSLOCG00000008863	zgc:171482	77	90.909	Lepisosteus_oculatus
ENSPREG00000019241	zgc:171482	100	89.855	ENSMAMG00000001031	zgc:171482	87	89.855	Mastacembelus_armatus
ENSPREG00000019241	zgc:171482	91	90.833	ENSMZEG00005027721	zgc:171482	86	90.833	Maylandia_zebra
ENSPREG00000019241	zgc:171482	93	95.349	ENSMMOG00000010523	zgc:171482	98	95.349	Mola_mola
ENSPREG00000019241	zgc:171482	89	95.122	ENSMALG00000017883	zgc:171482	80	95.122	Monopterus_albus
ENSPREG00000019241	zgc:171482	88	95.041	ENSNBRG00000021035	zgc:171482	90	95.041	Neolamprologus_brichardi
ENSPREG00000019241	zgc:171482	91	96.000	ENSONIG00000018365	zgc:171482	78	95.238	Oreochromis_niloticus
ENSPREG00000019241	zgc:171482	91	100.000	ENSORLG00000007607	zgc:171482	86	100.000	Oryzias_latipes
ENSPREG00000019241	zgc:171482	93	94.531	ENSORLG00020003563	zgc:171482	90	94.531	Oryzias_latipes_hni
ENSPREG00000019241	zgc:171482	91	100.000	ENSORLG00015008552	zgc:171482	86	100.000	Oryzias_latipes_hsok
ENSPREG00000019241	zgc:171482	94	96.154	ENSOMEG00000003526	zgc:171482	92	96.154	Oryzias_melastigma
ENSPREG00000019241	zgc:171482	80	90.909	ENSPKIG00000016244	zgc:171482	82	88.696	Paramormyrops_kingsleyae
ENSPREG00000019241	zgc:171482	84	95.690	ENSPKIG00000015911	-	81	95.690	Paramormyrops_kingsleyae
ENSPREG00000019241	zgc:171482	92	94.488	ENSPMGG00000020230	zgc:171482	82	94.488	Periophthalmus_magnuspinnatus
ENSPREG00000019241	zgc:171482	91	100.000	ENSPFOG00000001974	zgc:171482	78	100.000	Poecilia_formosa
ENSPREG00000019241	zgc:171482	91	100.000	ENSPLAG00000003327	zgc:171482	85	100.000	Poecilia_latipinna
ENSPREG00000019241	zgc:171482	91	100.000	ENSPMEG00000004988	zgc:171482	76	100.000	Poecilia_mexicana
ENSPREG00000019241	zgc:171482	91	96.032	ENSPNYG00000007773	zgc:171482	88	96.032	Pundamilia_nyererei
ENSPREG00000019241	zgc:171482	83	93.913	ENSPNAG00000007619	zgc:171482	79	89.600	Pygocentrus_nattereri
ENSPREG00000019241	zgc:171482	84	88.793	ENSSFOG00015016149	zgc:171482	93	88.793	Scleropages_formosus
ENSPREG00000019241	zgc:171482	91	85.714	ENSSFOG00015021238	zgc:171482	78	90.517	Scleropages_formosus
ENSPREG00000019241	zgc:171482	94	94.615	ENSSMAG00000002715	zgc:171482	83	94.615	Scophthalmus_maximus
ENSPREG00000019241	zgc:171482	91	97.619	ENSSDUG00000008773	zgc:171482	89	97.619	Seriola_dumerili
ENSPREG00000019241	zgc:171482	91	97.619	ENSSLDG00000019510	zgc:171482	89	97.619	Seriola_lalandi_dorsalis
ENSPREG00000019241	zgc:171482	90	97.581	ENSSPAG00000013724	zgc:171482	98	97.581	Stegastes_partitus
ENSPREG00000019241	zgc:171482	93	89.922	ENSTRUG00000005705	zgc:171482	76	89.922	Takifugu_rubripes
ENSPREG00000019241	zgc:171482	91	72.656	ENSTNIG00000008679	zgc:171482	86	72.656	Tetraodon_nigroviridis
ENSPREG00000019241	zgc:171482	73	87.500	ENSXETG00000013525	zmat4	79	87.500	Xenopus_tropicalis
ENSPREG00000019241	zgc:171482	87	88.430	ENSXMAG00000002641	zgc:171482	90	78.417	Xiphophorus_maculatus