EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000019478 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 8445 bases
Position: chrLG12:20931737-20940181
Accession: 103473931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000028861	CPL	PF08144.11	1.4e-09	1	1
ENSPREP00000028825	CPL	PF08144.11	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000029182	-	1209	-	ENSPREP00000028861	402 (aa)	-	-
ENSPRET00000029146	-	1323	XM_017307725	ENSPREP00000028825	440 (aa)	XP_017163214	-

Gene Model

Click here to download ENSPREG00000019478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000019478's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000019478	-	78	78.947	ENSAPOG00000020252	pum3	57	78.947	Acanthochromis_polyacanthus
ENSPREG00000019478	-	68	64.211	ENSAMEG00000012187	PUM3	51	45.622	Ailuropoda_melanoleuca
ENSPREG00000019478	-	66	54.830	ENSACIG00000009786	pum3	65	67.500	Amphilophus_citrinellus
ENSPREG00000019478	-	85	60.215	ENSAOCG00000004439	pum3	70	60.215	Amphiprion_ocellaris
ENSPREG00000019478	-	85	60.215	ENSAPEG00000020523	pum3	70	60.215	Amphiprion_percula
ENSPREG00000019478	-	74	60.932	ENSATEG00000005799	pum3	70	70.000	Anabas_testudineus
ENSPREG00000019478	-	67	67.368	ENSAPLG00000002920	PUM3	52	67.368	Anas_platyrhynchos
ENSPREG00000019478	-	80	42.979	ENSANAG00000024520	PUM3	51	46.759	Aotus_nancymaae
ENSPREG00000019478	-	69	76.842	ENSACLG00000001017	pum3	57	76.842	Astatotilapia_calliptera
ENSPREG00000019478	-	69	73.684	ENSAMXG00000020911	pum3	51	73.684	Astyanax_mexicanus
ENSPREG00000019478	-	69	64.211	ENSBTAG00000013357	PUM3	51	46.296	Bos_taurus
ENSPREG00000019478	-	69	65.263	ENSCJAG00000010917	PUM3	51	47.222	Callithrix_jacchus
ENSPREG00000019478	-	69	64.211	ENSCAFG00000002035	PUM3	51	46.296	Canis_familiaris
ENSPREG00000019478	-	69	64.211	ENSCAFG00020026867	PUM3	51	46.296	Canis_lupus_dingo
ENSPREG00000019478	-	69	64.737	ENSCHIG00000021559	PUM3	51	46.759	Capra_hircus
ENSPREG00000019478	-	69	64.211	ENSTSYG00000007481	PUM3	51	46.544	Carlito_syrichta
ENSPREG00000019478	-	69	65.263	ENSCCAG00000032650	PUM3	51	47.222	Cebus_capucinus
ENSPREG00000019478	-	69	65.263	ENSCATG00000024880	PUM3	51	47.222	Cercocebus_atys
ENSPREG00000019478	-	69	65.263	ENSCSAG00000008691	PUM3	51	47.222	Chlorocebus_sabaeus
ENSPREG00000019478	-	69	65.263	ENSCANG00000006142	PUM3	51	47.222	Colobus_angolensis_palliatus
ENSPREG00000019478	-	69	64.211	ENSCGRG00001016402	Pum3	51	45.833	Cricetulus_griseus_chok1gshd
ENSPREG00000019478	-	69	64.211	ENSCGRG00000010207	Pum3	51	45.833	Cricetulus_griseus_crigri
ENSPREG00000019478	-	74	56.738	ENSCSEG00000001565	pum3	70	56.835	Cynoglossus_semilaevis
ENSPREG00000019478	-	57	77.778	ENSCVAG00000006550	pum3	60	67.500	Cyprinodon_variegatus
ENSPREG00000019478	-	69	71.053	ENSDARG00000087779	pum3	54	69.588	Danio_rerio
ENSPREG00000019478	-	90	32.328	ENSEEUG00000010314	PUM3	51	47.368	Erinaceus_europaeus
ENSPREG00000019478	-	70	54.787	ENSELUG00000002215	pum3	50	53.646	Esox_lucius
ENSPREG00000019478	-	69	64.211	ENSFDAG00000021027	PUM3	51	46.009	Fukomys_damarensis
ENSPREG00000019478	-	74	68.406	ENSFHEG00000015576	pum3	68	68.927	Fundulus_heteroclitus
ENSPREG00000019478	-	67	67.368	ENSGALG00000010178	PUM3	50	48.558	Gallus_gallus
ENSPREG00000019478	-	67	63.380	ENSGACG00000017878	pum3	68	66.667	Gasterosteus_aculeatus
ENSPREG00000019478	-	70	51.337	ENSGAGG00000018983	PUM3	57	39.143	Gopherus_agassizii
ENSPREG00000019478	-	68	65.263	ENSGGOG00000006143	PUM3	51	47.222	Gorilla_gorilla
ENSPREG00000019478	-	69	64.211	ENSHGLG00000015868	-	51	46.479	Heterocephalus_glaber_female
ENSPREG00000019478	-	69	64.211	ENSHGLG00100018825	PUM3	51	46.479	Heterocephalus_glaber_male
ENSPREG00000019478	-	76	59.498	ENSHCOG00000010306	pum3	66	59.498	Hippocampus_comes
ENSPREG00000019478	-	76	45.540	ENSIPUG00000024801	pum3	51	76.842	Ictalurus_punctatus
ENSPREG00000019478	-	69	65.263	ENSSTOG00000009586	PUM3	51	47.222	Ictidomys_tridecemlineatus
ENSPREG00000019478	-	68	78.351	ENSKMAG00000010277	pum3	57	79.581	Kryptolebias_marmoratus
ENSPREG00000019478	-	74	59.857	ENSLBEG00000012213	pum3	71	62.500	Labrus_bergylta
ENSPREG00000019478	-	69	64.737	ENSMFAG00000001430	PUM3	51	46.759	Macaca_fascicularis
ENSPREG00000019478	-	69	64.737	ENSMMUG00000002362	PUM3	51	46.759	Macaca_mulatta
ENSPREG00000019478	-	69	64.737	ENSMNEG00000035288	PUM3	51	46.759	Macaca_nemestrina
ENSPREG00000019478	-	69	65.263	ENSMLEG00000034820	PUM3	51	47.222	Mandrillus_leucophaeus
ENSPREG00000019478	-	74	59.712	ENSMAMG00000022861	pum3	71	67.500	Mastacembelus_armatus
ENSPREG00000019478	-	80	77.368	ENSMZEG00005014205	pum3	56	77.368	Maylandia_zebra
ENSPREG00000019478	-	69	64.737	ENSMAUG00000009733	Pum3	51	46.296	Mesocricetus_auratus
ENSPREG00000019478	-	69	65.263	ENSMOCG00000019519	-	51	46.759	Microtus_ochrogaster
ENSPREG00000019478	-	100	50.725	ENSMMOG00000012184	pum3	63	78.421	Mola_mola
ENSPREG00000019478	-	62	44.255	ENSMODG00000015417	PUM3	52	46.296	Monodelphis_domestica
ENSPREG00000019478	-	86	63.830	ENSMALG00000022164	pum3	65	67.500	Monopterus_albus
ENSPREG00000019478	-	68	64.211	MGP_CAROLIEiJ_G0022845	Pum3	51	46.296	Mus_caroli
ENSPREG00000019478	-	69	63.684	ENSMUSG00000041360	Pum3	51	45.833	Mus_musculus
ENSPREG00000019478	-	69	64.211	MGP_PahariEiJ_G0014338	Pum3	51	46.296	Mus_pahari
ENSPREG00000019478	-	69	63.158	MGP_SPRETEiJ_G0023763	Pum3	51	45.833	Mus_spretus
ENSPREG00000019478	-	69	64.211	ENSMPUG00000005125	PUM3	51	45.833	Mustela_putorius_furo
ENSPREG00000019478	-	76	43.780	ENSNBRG00000021370	pum3	55	71.053	Neolamprologus_brichardi
ENSPREG00000019478	-	69	65.263	ENSNLEG00000008712	PUM3	51	47.222	Nomascus_leucogenys
ENSPREG00000019478	-	80	37.288	ENSODEG00000016477	-	51	40.465	Octodon_degus
ENSPREG00000019478	-	69	78.947	ENSONIG00000012733	pum3	57	78.947	Oreochromis_niloticus
ENSPREG00000019478	-	69	63.158	ENSOCUG00000026104	-	52	45.833	Oryctolagus_cuniculus
ENSPREG00000019478	-	69	64.211	ENSOCUG00000004189	-	51	46.759	Oryctolagus_cuniculus
ENSPREG00000019478	-	73	54.601	ENSORLG00000014935	pum3	65	59.364	Oryzias_latipes
ENSPREG00000019478	-	73	54.601	ENSORLG00020002841	pum3	65	59.364	Oryzias_latipes_hni
ENSPREG00000019478	-	77	54.601	ENSORLG00015015906	pum3	70	59.364	Oryzias_latipes_hsok
ENSPREG00000019478	-	75	54.601	ENSOMEG00000009427	pum3	72	59.364	Oryzias_melastigma
ENSPREG00000019478	-	69	65.263	ENSOGAG00000008125	-	51	46.296	Otolemur_garnettii
ENSPREG00000019478	-	69	64.737	ENSOARG00000013337	PUM3	51	46.759	Ovis_aries
ENSPREG00000019478	-	68	65.263	ENSPPAG00000041337	PUM3	51	47.005	Pan_paniscus
ENSPREG00000019478	-	68	64.737	ENSPPRG00000000809	PUM3	51	46.759	Panthera_pardus
ENSPREG00000019478	-	68	64.737	ENSPTIG00000021934	PUM3	51	46.759	Panthera_tigris_altaica
ENSPREG00000019478	-	68	65.263	ENSPTRG00000020735	PUM3	51	47.222	Pan_troglodytes
ENSPREG00000019478	-	69	65.263	ENSPANG00000025118	PUM3	51	47.222	Papio_anubis
ENSPREG00000019478	-	69	70.000	ENSPKIG00000022249	pum3	53	70.000	Paramormyrops_kingsleyae
ENSPREG00000019478	-	93	39.344	ENSPEMG00000019340	-	67	39.189	Peromyscus_maniculatus_bairdii
ENSPREG00000019478	-	86	82.979	ENSPFOG00000001719	pum3	54	95.263	Poecilia_formosa
ENSPREG00000019478	-	80	95.263	ENSPLAG00000020010	pum3	56	95.263	Poecilia_latipinna
ENSPREG00000019478	-	80	95.789	ENSPMEG00000017451	pum3	72	90.000	Poecilia_mexicana
ENSPREG00000019478	-	68	65.263	ENSPPYG00000019255	PUM3	51	47.222	Pongo_abelii
ENSPREG00000019478	-	90	33.118	ENSPCOG00000027325	PUM3	51	46.544	Propithecus_coquereli
ENSPREG00000019478	-	69	77.368	ENSPNYG00000016124	pum3	57	77.368	Pundamilia_nyererei
ENSPREG00000019478	-	69	70.000	ENSPNAG00000026524	pum3	50	70.000	Pygocentrus_nattereri
ENSPREG00000019478	-	69	64.737	ENSRNOG00000012574	Pum3	51	46.759	Rattus_norvegicus
ENSPREG00000019478	-	69	64.737	ENSRNOG00000048356	RGD1308750	51	46.759	Rattus_norvegicus
ENSPREG00000019478	-	69	65.263	ENSRBIG00000036924	PUM3	51	46.759	Rhinopithecus_bieti
ENSPREG00000019478	-	69	65.263	ENSRROG00000041089	PUM3	51	47.222	Rhinopithecus_roxellana
ENSPREG00000019478	-	69	65.789	ENSSBOG00000028066	PUM3	51	47.685	Saimiri_boliviensis_boliviensis
ENSPREG00000019478	-	69	70.000	ENSSFOG00015018778	pum3	50	70.000	Scleropages_formosus
ENSPREG00000019478	-	77	59.857	ENSSMAG00000013236	pum3	71	60.000	Scophthalmus_maximus
ENSPREG00000019478	-	74	59.857	ENSSDUG00000001887	pum3	69	62.500	Seriola_dumerili
ENSPREG00000019478	-	74	59.857	ENSSLDG00000015766	pum3	70	62.500	Seriola_lalandi_dorsalis
ENSPREG00000019478	-	69	54.211	ENSSARG00000000579	PUM3	51	54.211	Sorex_araneus
ENSPREG00000019478	-	68	65.789	ENSSPUG00000001707	PUM3	53	45.370	Sphenodon_punctatus
ENSPREG00000019478	-	74	59.498	ENSSPAG00000003976	pum3	71	60.000	Stegastes_partitus
ENSPREG00000019478	-	69	64.737	ENSSSCG00000005227	PUM3	60	46.759	Sus_scrofa
ENSPREG00000019478	-	69	78.947	ENSTRUG00000004074	pum3	57	78.947	Takifugu_rubripes
ENSPREG00000019478	-	68	80.000	ENSTNIG00000010325	pum3	55	80.000	Tetraodon_nigroviridis
ENSPREG00000019478	-	90	35.142	ENSUMAG00000018443	PUM3	63	48.710	Ursus_maritimus
ENSPREG00000019478	-	69	64.737	ENSVPAG00000010766	PUM3	51	46.296	Vicugna_pacos
ENSPREG00000019478	-	69	64.737	ENSVVUG00000006527	PUM3	51	46.759	Vulpes_vulpes
ENSPREG00000019478	-	80	82.632	ENSXCOG00000006725	pum3	59	85.000	Xiphophorus_couchianus
ENSPREG00000019478	-	69	91.579	ENSXMAG00000002926	pum3	56	91.579	Xiphophorus_maculatus