EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000019582 (Gene tree)
Gene ID: 103456620
Gene Symbol: pan3
Alias: zgc:171628
Full Name: poly(A) specific ribonuclease subunit PAN3
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 17578 bases
Position: chrLG20:14713679-14731256
Accession: 103456620
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000028983	zf-CCCH	PF00642.24	0.00031	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000029280	-	2379	XM_008396280	ENSPREP00000028959	792 (aa)	XP_008394502	UPI0004A24F0F
ENSPRET00000029304	-	2295	-	ENSPREP00000028983	764 (aa)	-	-

Gene Model

Click here to download ENSPREG00000019582's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000019582's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000019582	pan3	99	81.250	ENSELUG00000014375	pan3	99	81.648	Esox_lucius
ENSPREG00000019582	pan3	100	90.977	ENSKMAG00000008813	pan3	100	91.489	Kryptolebias_marmoratus
ENSPREG00000019582	pan3	99	80.431	ENSLACG00000017156	PAN3	100	70.956	Latimeria_chalumnae
ENSPREG00000019582	pan3	100	88.384	ENSORLG00000008758	pan3	100	88.889	Oryzias_latipes
ENSPREG00000019582	pan3	100	90.532	ENSORLG00015014393	pan3	100	90.532	Oryzias_latipes_hsok
ENSPREG00000019582	pan3	100	86.812	ENSOMEG00000007798	pan3	100	86.812	Oryzias_melastigma
ENSPREG00000019582	pan3	73	74.828	ENSPKIG00000008329	-	96	75.345	Paramormyrops_kingsleyae
ENSPREG00000019582	pan3	97	65.201	ENSPMAG00000002383	pan3	100	65.365	Petromyzon_marinus
ENSPREG00000019582	pan3	100	90.794	ENSSMAG00000014517	pan3	98	91.299	Scophthalmus_maximus
ENSPREG00000019582	pan3	100	76.196	ENSXETG00000011794	pan3	100	76.700	Xenopus_tropicalis