EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000019696 (Gene tree)
Gene ID: 103470879
Gene Symbol: lsm11
Alias: -
Full Name: LSM11%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 6446 bases
Position: chrLG10:2332462-2338907
Accession: 103470879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000029102	LSM	PF01423.22	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000029423	-	4400	XM_008419563	ENSPREP00000029102	339 (aa)	XP_008417785	UPI0004A272D3

Gene Model

Click here to download ENSPREG00000019696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000019696's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000019696	lsm11	78	30.605	ENSCSAVG00000011571	-	98	30.605	Ciona_savignyi
ENSPREG00000019696	lsm11	89	65.517	ENSCSEG00000019951	lsm11	100	65.517	Cynoglossus_semilaevis
ENSPREG00000019696	lsm11	89	71.382	ENSCVAG00000011703	lsm11	100	72.607	Cyprinodon_variegatus
ENSPREG00000019696	lsm11	89	63.438	ENSMMOG00000009365	lsm11	100	63.636	Mola_mola
ENSPREG00000019696	lsm11	89	63.208	ENSPMGG00000020709	lsm11	100	63.208	Periophthalmus_magnuspinnatus
ENSPREG00000019696	lsm11	91	96.117	ENSPFOG00000000512	lsm11	100	96.117	Poecilia_formosa
ENSPREG00000019696	lsm11	89	95.724	ENSPLAG00000019434	lsm11	100	95.724	Poecilia_latipinna
ENSPREG00000019696	lsm11	89	91.089	ENSXMAG00000008238	lsm11	100	91.419	Xiphophorus_maculatus