EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000019781 (Gene tree)
Gene ID: 103456612
Gene Symbol: ythdf3
Alias: -
Full Name: YTH N6-methyladenosine RNA binding protein 3
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 8173 bases
Position: chrLG20:14839031-14847203
Accession: 103456612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000029256	YTH	PF04146.15	6.9e-40	1	1
ENSPREP00000029233	YTH	PF04146.15	8.2e-40	1	1
ENSPREP00000029222	YTH	PF04146.15	8.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000029588	-	1680	-	ENSPREP00000029256	559 (aa)	-	-
ENSPRET00000029554	-	2062	XM_008396266	ENSPREP00000029222	604 (aa)	XP_008394488	UPI0004A4A425
ENSPRET00000029564	-	1814	-	ENSPREP00000029233	583 (aa)	-	-

Gene Model

Click here to download ENSPREG00000019781's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000019781's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000019781	ythdf3	99	60.697	ENSPREG00000017662	YTHDF1	94	60.847
ENSPREG00000019781	ythdf3	98	61.760	ENSPREG00000019412	ythdf2	97	64.444
ENSPREG00000019781	ythdf3	96	59.643	ENSPREG00000002173	ythdf1	97	60.601

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000019781	ythdf3	100	94.040	ENSAPOG00000024006	ythdf3	100	94.040	Acanthochromis_polyacanthus
ENSPREG00000019781	ythdf3	99	88.267	ENSACIG00000022287	ythdf3	99	87.652	Amphilophus_citrinellus
ENSPREG00000019781	ythdf3	100	94.040	ENSAOCG00000000723	ythdf3	100	94.040	Amphiprion_ocellaris
ENSPREG00000019781	ythdf3	100	93.543	ENSAPEG00000020352	ythdf3	100	93.543	Amphiprion_percula
ENSPREG00000019781	ythdf3	99	93.403	ENSATEG00000011478	ythdf3	97	96.923	Anabas_testudineus
ENSPREG00000019781	ythdf3	54	91.060	ENSACLG00000026145	ythdf3	99	91.928	Astatotilapia_calliptera
ENSPREG00000019781	ythdf3	99	76.581	ENSAMXG00000030366	ythdf3	100	81.410	Astyanax_mexicanus
ENSPREG00000019781	ythdf3	99	76.117	ENSCGRG00000005613	-	100	76.460	Cricetulus_griseus_crigri
ENSPREG00000019781	ythdf3	64	59.041	ENSCGRG00000008289	-	100	52.051	Cricetulus_griseus_crigri
ENSPREG00000019781	ythdf3	100	91.405	ENSCSEG00000014861	ythdf3	99	91.240	Cynoglossus_semilaevis
ENSPREG00000019781	ythdf3	100	95.033	ENSCVAG00000018114	ythdf3	100	92.715	Cyprinodon_variegatus
ENSPREG00000019781	ythdf3	100	78.896	ENSDARG00000057939	ythdf3	100	81.077	Danio_rerio
ENSPREG00000019781	ythdf3	100	82.107	ENSELUG00000014824	ythdf3	100	80.775	Esox_lucius
ENSPREG00000019781	ythdf3	100	96.226	ENSFHEG00000016395	ythdf3	100	96.226	Fundulus_heteroclitus
ENSPREG00000019781	ythdf3	100	78.720	ENSGMOG00000014950	ythdf3	100	81.086	Gadus_morhua
ENSPREG00000019781	ythdf3	100	98.013	ENSGAFG00000006529	ythdf3	100	98.013	Gambusia_affinis
ENSPREG00000019781	ythdf3	99	90.050	ENSGACG00000002998	ythdf3	99	89.552	Gasterosteus_aculeatus
ENSPREG00000019781	ythdf3	99	82.444	ENSHBUG00000018631	ythdf3	99	91.626	Haplochromis_burtoni
ENSPREG00000019781	ythdf3	99	83.054	ENSHCOG00000015277	ythdf3	99	81.426	Hippocampus_comes
ENSPREG00000019781	ythdf3	100	78.502	ENSIPUG00000014157	YTHDF1	100	80.519	Ictalurus_punctatus
ENSPREG00000019781	ythdf3	100	92.991	ENSKMAG00000008447	ythdf3	97	97.696	Kryptolebias_marmoratus
ENSPREG00000019781	ythdf3	84	95.982	ENSLBEG00000017003	ythdf3	99	87.726	Labrus_bergylta
ENSPREG00000019781	ythdf3	100	87.479	ENSMAMG00000000414	ythdf3	100	84.391	Mastacembelus_armatus
ENSPREG00000019781	ythdf3	99	82.444	ENSMZEG00005021836	ythdf3	99	93.367	Maylandia_zebra
ENSPREG00000019781	ythdf3	65	70.419	ENSMAUG00000012560	Ythdf3	99	71.244	Mesocricetus_auratus
ENSPREG00000019781	ythdf3	96	82.714	ENSMMOG00000003402	ythdf3	97	93.846	Mola_mola
ENSPREG00000019781	ythdf3	100	93.212	ENSMALG00000000147	ythdf3	100	93.212	Monopterus_albus
ENSPREG00000019781	ythdf3	99	75.085	MGP_SPRETEiJ_G0025794	Ythdf3	99	76.329	Mus_spretus
ENSPREG00000019781	ythdf3	99	81.413	ENSNBRG00000023433	ythdf3	99	92.637	Neolamprologus_brichardi
ENSPREG00000019781	ythdf3	52	79.730	ENSNLEG00000003872	YTHDF3	99	75.986	Nomascus_leucogenys
ENSPREG00000019781	ythdf3	54	91.391	ENSONIG00000014175	ythdf3	99	93.223	Oreochromis_niloticus
ENSPREG00000019781	ythdf3	100	73.019	ENSOANG00000005053	YTHDF3	100	75.939	Ornithorhynchus_anatinus
ENSPREG00000019781	ythdf3	100	91.225	ENSORLG00000008640	ythdf3	100	91.225	Oryzias_latipes
ENSPREG00000019781	ythdf3	100	91.391	ENSORLG00020014684	ythdf3	100	91.391	Oryzias_latipes_hni
ENSPREG00000019781	ythdf3	100	91.225	ENSORLG00015014880	ythdf3	100	91.225	Oryzias_latipes_hsok
ENSPREG00000019781	ythdf3	100	91.722	ENSOMEG00000008212	ythdf3	100	91.722	Oryzias_melastigma
ENSPREG00000019781	ythdf3	99	79.537	ENSPKIG00000008298	ythdf3	100	80.775	Paramormyrops_kingsleyae
ENSPREG00000019781	ythdf3	97	86.422	ENSPMGG00000023791	ythdf3	96	94.521	Periophthalmus_magnuspinnatus
ENSPREG00000019781	ythdf3	100	98.344	ENSPFOG00000006082	ythdf3	100	98.344	Poecilia_formosa
ENSPREG00000019781	ythdf3	100	98.675	ENSPLAG00000006902	ythdf3	100	98.675	Poecilia_latipinna
ENSPREG00000019781	ythdf3	100	98.013	ENSPMEG00000012922	ythdf3	100	98.013	Poecilia_mexicana
ENSPREG00000019781	ythdf3	54	90.805	ENSPPYG00000018626	YTHDF3	99	58.462	Pongo_abelii
ENSPREG00000019781	ythdf3	86	92.553	ENSPVAG00000002740	YTHDF3	85	92.553	Pteropus_vampyrus
ENSPREG00000019781	ythdf3	99	81.413	ENSPNYG00000002949	ythdf3	99	90.998	Pundamilia_nyererei
ENSPREG00000019781	ythdf3	83	88.940	ENSSFOG00015015445	ythdf3	97	88.940	Scleropages_formosus
ENSPREG00000019781	ythdf3	100	91.201	ENSSMAG00000014999	ythdf3	100	90.863	Scophthalmus_maximus
ENSPREG00000019781	ythdf3	100	93.874	ENSSDUG00000014403	ythdf3	100	93.874	Seriola_dumerili
ENSPREG00000019781	ythdf3	100	93.874	ENSSLDG00000005029	ythdf3	100	93.874	Seriola_lalandi_dorsalis
ENSPREG00000019781	ythdf3	98	84.153	ENSSPAG00000001269	ythdf3	99	91.089	Stegastes_partitus
ENSPREG00000019781	ythdf3	100	89.934	ENSTRUG00000007870	ythdf3	100	88.614	Takifugu_rubripes
ENSPREG00000019781	ythdf3	100	86.139	ENSTNIG00000012698	ythdf3	100	83.855	Tetraodon_nigroviridis
ENSPREG00000019781	ythdf3	86	85.590	ENSVPAG00000008104	YTHDF3	86	88.525	Vicugna_pacos
ENSPREG00000019781	ythdf3	99	75.524	ENSXETG00000021659	ythdf3	99	73.435	Xenopus_tropicalis
ENSPREG00000019781	ythdf3	100	93.139	ENSXCOG00000009687	ythdf3	100	92.931	Xiphophorus_couchianus
ENSPREG00000019781	ythdf3	100	97.517	ENSXMAG00000009698	ythdf3	100	97.517	Xiphophorus_maculatus