EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000019821 (Gene tree)
Gene ID: -
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 6114 bases
Position: chrLG11:7236352-7242465
Accession: 103472144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000029302	RRM_1	PF00076.22	2.6e-24	1	2
ENSPREP00000029302	RRM_1	PF00076.22	2.6e-24	2	2
ENSPREP00000029306	RRM_1	PF00076.22	1.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000029635	-	822	XM_008421547	ENSPREP00000029302	273 (aa)	XP_008419769	-
ENSPRET00000029639	-	609	-	ENSPREP00000029306	202 (aa)	-	-

Gene Model

Click here to download ENSPREG00000019821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000019821's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000019821	trnau1apa	58	31.098	ENSPREG00000019232	tia1l	56	31.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000019821	trnau1apa	86	64.286	ENSG00000180098	TRNAU1AP	93	53.903	Homo_sapiens
ENSPREG00000019821	trnau1apa	91	89.024	ENSAPOG00000007148	TRNAU1AP	89	89.024	Acanthochromis_polyacanthus
ENSPREG00000019821	trnau1apa	86	64.286	ENSAMEG00000011367	TRNAU1AP	93	53.759	Ailuropoda_melanoleuca
ENSPREG00000019821	trnau1apa	95	84.444	ENSACIG00000004161	trnau1apa	93	80.851	Amphilophus_citrinellus
ENSPREG00000019821	trnau1apa	95	84.444	ENSAOCG00000008056	trnau1apa	89	82.105	Amphiprion_ocellaris
ENSPREG00000019821	trnau1apa	95	84.444	ENSAPEG00000008868	trnau1apa	89	82.105	Amphiprion_percula
ENSPREG00000019821	trnau1apa	98	78.000	ENSATEG00000012140	trnau1apa	89	78.000	Anabas_testudineus
ENSPREG00000019821	trnau1apa	90	59.375	ENSAPLG00000002606	TRNAU1AP	97	54.511	Anas_platyrhynchos
ENSPREG00000019821	trnau1apa	70	38.073	ENSACAG00000004205	-	86	36.245	Anolis_carolinensis
ENSPREG00000019821	trnau1apa	86	64.286	ENSACAG00000003995	-	87	64.286	Anolis_carolinensis
ENSPREG00000019821	trnau1apa	86	64.286	ENSANAG00000018976	TRNAU1AP	93	53.903	Aotus_nancymaae
ENSPREG00000019821	trnau1apa	95	86.667	ENSACLG00000018515	trnau1apa	88	86.667	Astatotilapia_calliptera
ENSPREG00000019821	trnau1apa	86	67.857	ENSAMXG00000029240	-	95	67.857	Astyanax_mexicanus
ENSPREG00000019821	trnau1apa	93	63.441	ENSAMXG00000013750	trnau1apa	94	50.174	Astyanax_mexicanus
ENSPREG00000019821	trnau1apa	86	64.286	ENSBTAG00000010393	TRNAU1AP	93	53.532	Bos_taurus
ENSPREG00000019821	trnau1apa	86	64.286	ENSCJAG00000009717	TRNAU1AP	93	53.903	Callithrix_jacchus
ENSPREG00000019821	trnau1apa	86	64.286	ENSCAFG00000011735	TRNAU1AP	93	53.903	Canis_familiaris
ENSPREG00000019821	trnau1apa	86	64.286	ENSCAFG00020023584	TRNAU1AP	93	53.903	Canis_lupus_dingo
ENSPREG00000019821	trnau1apa	86	64.286	ENSCHIG00000023215	TRNAU1AP	93	53.532	Capra_hircus
ENSPREG00000019821	trnau1apa	86	64.286	ENSTSYG00000003506	TRNAU1AP	93	54.373	Carlito_syrichta
ENSPREG00000019821	trnau1apa	86	64.286	ENSCPOG00000001925	TRNAU1AP	93	53.903	Cavia_porcellus
ENSPREG00000019821	trnau1apa	86	64.286	ENSCCAG00000037506	TRNAU1AP	93	53.903	Cebus_capucinus
ENSPREG00000019821	trnau1apa	86	64.286	ENSCATG00000044617	TRNAU1AP	93	53.903	Cercocebus_atys
ENSPREG00000019821	trnau1apa	86	64.286	ENSCLAG00000008223	TRNAU1AP	93	53.903	Chinchilla_lanigera
ENSPREG00000019821	trnau1apa	86	64.286	ENSCSAG00000001014	TRNAU1AP	93	53.903	Chlorocebus_sabaeus
ENSPREG00000019821	trnau1apa	82	65.789	ENSCPBG00000000121	TRNAU1AP	96	54.580	Chrysemys_picta_bellii
ENSPREG00000019821	trnau1apa	58	50.000	ENSCSAVG00000011781	-	91	47.126	Ciona_savignyi
ENSPREG00000019821	trnau1apa	87	45.865	ENSCANG00000041949	TRNAU1AP	93	46.429	Colobus_angolensis_palliatus
ENSPREG00000019821	trnau1apa	86	64.286	ENSCGRG00001004713	Trnau1ap	93	53.903	Cricetulus_griseus_chok1gshd
ENSPREG00000019821	trnau1apa	86	64.286	ENSCGRG00000014532	Trnau1ap	93	53.903	Cricetulus_griseus_crigri
ENSPREG00000019821	trnau1apa	96	80.000	ENSCSEG00000006663	trnau1apa	89	77.895	Cynoglossus_semilaevis
ENSPREG00000019821	trnau1apa	92	93.671	ENSCVAG00000018069	trnau1apa	88	93.671	Cyprinodon_variegatus
ENSPREG00000019821	trnau1apa	94	48.110	ENSDARG00000101323	trnau1apa	93	47.423	Danio_rerio
ENSPREG00000019821	trnau1apa	86	64.286	ENSDNOG00000033009	TRNAU1AP	93	53.903	Dasypus_novemcinctus
ENSPREG00000019821	trnau1apa	63	56.977	ENSDNOG00000047959	-	89	56.977	Dasypus_novemcinctus
ENSPREG00000019821	trnau1apa	84	65.476	ENSDORG00000006349	Trnau1ap	93	57.371	Dipodomys_ordii
ENSPREG00000019821	trnau1apa	69	66.667	ENSETEG00000012594	TRNAU1AP	94	51.502	Echinops_telfairi
ENSPREG00000019821	trnau1apa	60	46.250	ENSEBUG00000006349	-	56	46.250	Eptatretus_burgeri
ENSPREG00000019821	trnau1apa	86	64.286	ENSEASG00005010062	TRNAU1AP	81	66.667	Equus_asinus_asinus
ENSPREG00000019821	trnau1apa	86	64.286	ENSECAG00000012980	TRNAU1AP	81	66.667	Equus_caballus
ENSPREG00000019821	trnau1apa	86	80.000	ENSELUG00000022790	-	95	58.889	Esox_lucius
ENSPREG00000019821	trnau1apa	91	85.714	ENSELUG00000017686	trnau1apa	91	85.714	Esox_lucius
ENSPREG00000019821	trnau1apa	86	64.286	ENSFCAG00000013401	TRNAU1AP	93	53.903	Felis_catus
ENSPREG00000019821	trnau1apa	82	65.789	ENSFALG00000001371	TRNAU1AP	96	53.817	Ficedula_albicollis
ENSPREG00000019821	trnau1apa	86	64.286	ENSFDAG00000018599	TRNAU1AP	93	53.903	Fukomys_damarensis
ENSPREG00000019821	trnau1apa	74	82.648	ENSFHEG00000018232	trnau1apa	72	86.957	Fundulus_heteroclitus
ENSPREG00000019821	trnau1apa	95	74.286	ENSGMOG00000016508	trnau1apa	84	74.286	Gadus_morhua
ENSPREG00000019821	trnau1apa	63	34.742	ENSGALG00000012721	C2H6orf52	79	33.803	Gallus_gallus
ENSPREG00000019821	trnau1apa	86	63.095	ENSGALG00000001310	-	93	54.135	Gallus_gallus
ENSPREG00000019821	trnau1apa	71	92.391	ENSGAFG00000004928	trnau1apa	81	92.391	Gambusia_affinis
ENSPREG00000019821	trnau1apa	95	86.364	ENSGACG00000001443	trnau1apa	86	86.364	Gasterosteus_aculeatus
ENSPREG00000019821	trnau1apa	82	65.789	ENSGAGG00000004940	TRNAU1AP	96	54.580	Gopherus_agassizii
ENSPREG00000019821	trnau1apa	86	64.286	ENSGGOG00000003511	TRNAU1AP	93	53.903	Gorilla_gorilla
ENSPREG00000019821	trnau1apa	95	82.105	ENSHBUG00000002510	trnau1apa	89	80.000	Haplochromis_burtoni
ENSPREG00000019821	trnau1apa	86	64.286	ENSHGLG00000010380	TRNAU1AP	93	53.903	Heterocephalus_glaber_female
ENSPREG00000019821	trnau1apa	80	66.667	ENSHGLG00100012699	TRNAU1AP	91	53.257	Heterocephalus_glaber_male
ENSPREG00000019821	trnau1apa	96	75.789	ENSHCOG00000014770	trnau1apa	89	75.789	Hippocampus_comes
ENSPREG00000019821	trnau1apa	86	64.286	ENSSTOG00000000079	TRNAU1AP	93	53.903	Ictidomys_tridecemlineatus
ENSPREG00000019821	trnau1apa	88	62.637	ENSJJAG00000010128	Trnau1ap	93	53.903	Jaculus_jaculus
ENSPREG00000019821	trnau1apa	98	83.158	ENSKMAG00000001230	trnau1apa	89	83.158	Kryptolebias_marmoratus
ENSPREG00000019821	trnau1apa	99	79.000	ENSLBEG00000011683	trnau1apa	89	79.000	Labrus_bergylta
ENSPREG00000019821	trnau1apa	87	48.120	ENSLACG00000005541	TRNAU1AP	93	47.312	Latimeria_chalumnae
ENSPREG00000019821	trnau1apa	89	65.169	ENSLOCG00000004041	trnau1apa	87	65.169	Lepisosteus_oculatus
ENSPREG00000019821	trnau1apa	86	65.476	ENSLAFG00000007628	TRNAU1AP	93	54.275	Loxodonta_africana
ENSPREG00000019821	trnau1apa	86	64.286	ENSMFAG00000043751	TRNAU1AP	93	53.903	Macaca_fascicularis
ENSPREG00000019821	trnau1apa	86	64.286	ENSMMUG00000006561	TRNAU1AP	93	53.903	Macaca_mulatta
ENSPREG00000019821	trnau1apa	86	64.286	ENSMNEG00000044201	TRNAU1AP	93	53.903	Macaca_nemestrina
ENSPREG00000019821	trnau1apa	86	64.286	ENSMLEG00000015649	TRNAU1AP	93	56.322	Mandrillus_leucophaeus
ENSPREG00000019821	trnau1apa	98	82.105	ENSMAMG00000001247	trnau1apa	89	82.105	Mastacembelus_armatus
ENSPREG00000019821	trnau1apa	95	86.667	ENSMZEG00005017722	trnau1apa	88	86.667	Maylandia_zebra
ENSPREG00000019821	trnau1apa	84	66.250	ENSMGAG00000002105	TRNAU1AP	96	54.135	Meleagris_gallopavo
ENSPREG00000019821	trnau1apa	86	64.286	ENSMICG00000008386	TRNAU1AP	93	53.903	Microcebus_murinus
ENSPREG00000019821	trnau1apa	86	64.286	ENSMOCG00000011189	Trnau1ap	93	53.903	Microtus_ochrogaster
ENSPREG00000019821	trnau1apa	95	77.215	ENSMMOG00000012107	trnau1apa	98	64.164	Mola_mola
ENSPREG00000019821	trnau1apa	86	62.500	ENSMODG00000010927	TRNAU1AP	93	54.135	Monodelphis_domestica
ENSPREG00000019821	trnau1apa	95	88.506	ENSMALG00000016778	trnau1apa	88	85.870	Monopterus_albus
ENSPREG00000019821	trnau1apa	86	64.286	MGP_CAROLIEiJ_G0026563	Trnau1ap	95	53.147	Mus_caroli
ENSPREG00000019821	trnau1apa	86	64.286	ENSMUSG00000028898	Trnau1ap	95	53.147	Mus_musculus
ENSPREG00000019821	trnau1apa	86	64.286	MGP_PahariEiJ_G0028896	Trnau1ap	84	72.881	Mus_pahari
ENSPREG00000019821	trnau1apa	86	64.286	MGP_SPRETEiJ_G0027544	Trnau1ap	95	53.147	Mus_spretus
ENSPREG00000019821	trnau1apa	86	64.286	ENSMPUG00000015511	TRNAU1AP	93	54.275	Mustela_putorius_furo
ENSPREG00000019821	trnau1apa	86	64.286	ENSMLUG00000012586	TRNAU1AP	93	53.903	Myotis_lucifugus
ENSPREG00000019821	trnau1apa	86	64.286	ENSNGAG00000015881	Trnau1ap	93	55.263	Nannospalax_galili
ENSPREG00000019821	trnau1apa	96	84.000	ENSNBRG00000001758	trnau1apa	84	84.000	Neolamprologus_brichardi
ENSPREG00000019821	trnau1apa	94	64.286	ENSNLEG00000009822	TRNAU1AP	93	56.322	Nomascus_leucogenys
ENSPREG00000019821	trnau1apa	84	65.476	ENSMEUG00000006117	TRNAU1AP	96	53.759	Notamacropus_eugenii
ENSPREG00000019821	trnau1apa	77	56.044	ENSOPRG00000007084	-	54	56.044	Ochotona_princeps
ENSPREG00000019821	trnau1apa	86	64.286	ENSODEG00000002970	TRNAU1AP	93	53.903	Octodon_degus
ENSPREG00000019821	trnau1apa	67	90.698	ENSONIG00000004715	trnau1apa	81	90.698	Oreochromis_niloticus
ENSPREG00000019821	trnau1apa	94	55.422	ENSOANG00000005325	-	80	55.422	Ornithorhynchus_anatinus
ENSPREG00000019821	trnau1apa	86	63.095	ENSOCUG00000011704	-	89	61.798	Oryctolagus_cuniculus
ENSPREG00000019821	trnau1apa	77	46.429	ENSOCUG00000006834	-	64	53.659	Oryctolagus_cuniculus
ENSPREG00000019821	trnau1apa	94	52.273	ENSOCUG00000002353	-	93	48.106	Oryctolagus_cuniculus
ENSPREG00000019821	trnau1apa	98	85.870	ENSORLG00000010428	trnau1apa	88	85.870	Oryzias_latipes
ENSPREG00000019821	trnau1apa	98	85.870	ENSORLG00020000926	trnau1ap	88	85.870	Oryzias_latipes_hni
ENSPREG00000019821	trnau1apa	98	85.870	ENSORLG00015009858	trnau1ap	88	85.870	Oryzias_latipes_hsok
ENSPREG00000019821	trnau1apa	98	86.957	ENSOMEG00000007873	trnau1apa	88	86.957	Oryzias_melastigma
ENSPREG00000019821	trnau1apa	86	64.286	ENSOGAG00000002274	TRNAU1AP	93	53.903	Otolemur_garnettii
ENSPREG00000019821	trnau1apa	86	64.286	ENSOARG00000002843	TRNAU1AP	93	53.532	Ovis_aries
ENSPREG00000019821	trnau1apa	86	64.286	ENSPPAG00000033927	TRNAU1AP	93	54.074	Pan_paniscus
ENSPREG00000019821	trnau1apa	86	64.286	ENSPPRG00000004416	TRNAU1AP	93	53.903	Panthera_pardus
ENSPREG00000019821	trnau1apa	86	64.286	ENSPTIG00000016677	TRNAU1AP	93	53.903	Panthera_tigris_altaica
ENSPREG00000019821	trnau1apa	76	63.235	ENSPTRG00000000434	-	90	54.468	Pan_troglodytes
ENSPREG00000019821	trnau1apa	86	64.286	ENSPANG00000016019	TRNAU1AP	93	53.903	Papio_anubis
ENSPREG00000019821	trnau1apa	86	70.238	ENSPKIG00000015511	trnau1apa	90	52.536	Paramormyrops_kingsleyae
ENSPREG00000019821	trnau1apa	85	77.500	ENSPKIG00000022205	-	92	57.527	Paramormyrops_kingsleyae
ENSPREG00000019821	trnau1apa	82	65.789	ENSPSIG00000006864	TRNAU1AP	96	54.580	Pelodiscus_sinensis
ENSPREG00000019821	trnau1apa	96	84.337	ENSPMGG00000023893	trnau1apa	94	84.337	Periophthalmus_magnuspinnatus
ENSPREG00000019821	trnau1apa	86	63.095	ENSPEMG00000007877	Trnau1ap	93	53.532	Peromyscus_maniculatus_bairdii
ENSPREG00000019821	trnau1apa	60	55.090	ENSPMAG00000000592	trnau1apa	92	55.090	Petromyzon_marinus
ENSPREG00000019821	trnau1apa	62	60.241	ENSPMAG00000005934	trnau1apa	86	60.241	Petromyzon_marinus
ENSPREG00000019821	trnau1apa	99	92.391	ENSPFOG00000008100	trnau1apa	88	92.391	Poecilia_formosa
ENSPREG00000019821	trnau1apa	92	100.000	ENSPLAG00000010236	trnau1apa	89	100.000	Poecilia_latipinna
ENSPREG00000019821	trnau1apa	94	100.000	ENSPMEG00000016387	trnau1apa	85	100.000	Poecilia_mexicana
ENSPREG00000019821	trnau1apa	79	47.273	ENSPPYG00000001639	-	91	48.182	Pongo_abelii
ENSPREG00000019821	trnau1apa	86	66.265	ENSPCOG00000027712	-	93	53.903	Propithecus_coquereli
ENSPREG00000019821	trnau1apa	87	47.773	ENSPCOG00000023470	-	94	47.699	Propithecus_coquereli
ENSPREG00000019821	trnau1apa	86	64.286	ENSPVAG00000017214	TRNAU1AP	93	53.903	Pteropus_vampyrus
ENSPREG00000019821	trnau1apa	95	82.105	ENSPNYG00000010130	trnau1apa	89	80.000	Pundamilia_nyererei
ENSPREG00000019821	trnau1apa	95	61.111	ENSPNAG00000024905	trnau1apa	94	53.696	Pygocentrus_nattereri
ENSPREG00000019821	trnau1apa	60	70.122	ENSRNOG00000055344	Trnau1ap	56	70.122	Rattus_norvegicus
ENSPREG00000019821	trnau1apa	86	64.286	ENSRBIG00000029083	TRNAU1AP	93	53.903	Rhinopithecus_bieti
ENSPREG00000019821	trnau1apa	86	64.286	ENSRROG00000029128	TRNAU1AP	93	53.903	Rhinopithecus_roxellana
ENSPREG00000019821	trnau1apa	86	64.286	ENSSBOG00000021299	TRNAU1AP	93	53.903	Saimiri_boliviensis_boliviensis
ENSPREG00000019821	trnau1apa	86	62.500	ENSSHAG00000008108	TRNAU1AP	93	54.511	Sarcophilus_harrisii
ENSPREG00000019821	trnau1apa	98	77.895	ENSSMAG00000020851	trnau1apa	89	77.895	Scophthalmus_maximus
ENSPREG00000019821	trnau1apa	95	85.556	ENSSDUG00000011734	trnau1apa	89	83.158	Seriola_dumerili
ENSPREG00000019821	trnau1apa	99	61.314	ENSSLDG00000012101	trnau1apa	98	61.382	Seriola_lalandi_dorsalis
ENSPREG00000019821	trnau1apa	84	67.500	ENSSARG00000007536	TRNAU1AP	96	55.263	Sorex_araneus
ENSPREG00000019821	trnau1apa	94	59.091	ENSSPUG00000010400	-	93	52.632	Sphenodon_punctatus
ENSPREG00000019821	trnau1apa	76	40.244	ENSSPUG00000010415	-	94	46.667	Sphenodon_punctatus
ENSPREG00000019821	trnau1apa	95	85.556	ENSSPAG00000005029	trnau1apa	89	83.158	Stegastes_partitus
ENSPREG00000019821	trnau1apa	84	67.500	ENSSSCG00000030284	TRNAU1AP	93	53.903	Sus_scrofa
ENSPREG00000019821	trnau1apa	63	37.186	ENSTGUG00000005908	-	99	38.191	Taeniopygia_guttata
ENSPREG00000019821	trnau1apa	84	64.286	ENSTGUG00000000735	-	96	54.887	Taeniopygia_guttata
ENSPREG00000019821	trnau1apa	98	84.211	ENSTRUG00000003352	trnau1apa	88	84.211	Takifugu_rubripes
ENSPREG00000019821	trnau1apa	98	81.053	ENSTNIG00000006129	trnau1apa	89	81.053	Tetraodon_nigroviridis
ENSPREG00000019821	trnau1apa	81	70.000	ENSTBEG00000008049	-	78	70.000	Tupaia_belangeri
ENSPREG00000019821	trnau1apa	86	64.286	ENSTTRG00000001854	TRNAU1AP	93	53.903	Tursiops_truncatus
ENSPREG00000019821	trnau1apa	82	67.105	ENSUAMG00000008789	TRNAU1AP	96	53.585	Ursus_americanus
ENSPREG00000019821	trnau1apa	86	64.286	ENSUMAG00000011068	TRNAU1AP	93	53.903	Ursus_maritimus
ENSPREG00000019821	trnau1apa	69	70.455	ENSVPAG00000006778	TRNAU1AP	66	66.667	Vicugna_pacos
ENSPREG00000019821	trnau1apa	84	65.476	ENSVVUG00000012518	TRNAU1AP	87	53.903	Vulpes_vulpes
ENSPREG00000019821	trnau1apa	99	92.391	ENSXMAG00000017361	trnau1apa	88	92.391	Xiphophorus_maculatus