EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000019847 (Gene tree)
Gene ID: -
Gene Symbol: tnpo3 (1 of many)
Alias: zgc:55409
Full Name: transportin 3
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 3058 bases
Position: chrKK215283.1:1392002-1395059
Accession: ZDB-GENE-040426-708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000029316	Xpo1	PF08389.12	1e-24	1	1
ENSPREP00000029316	IBN_N	PF03810.19	6.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000029649	-	876	-	ENSPREP00000029316	291 (aa)	-	-

Gene Model

Click here to download ENSPREG00000019847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000019847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000019847	tnpo3	97	54.770	ENSCSAVG00000008623	-	95	54.152	Ciona_savignyi
ENSPREG00000019847	tnpo3	100	90.378	ENSCSEG00000005952	tnpo3	69	86.093	Cynoglossus_semilaevis
ENSPREG00000019847	tnpo3	100	85.223	ENSECAG00000012815	TNPO3	59	85.223	Equus_caballus
ENSPREG00000019847	tnpo3	100	83.959	ENSGALG00000039420	TNPO3	54	83.959	Gallus_gallus
ENSPREG00000019847	tnpo3	100	99.313	ENSGAFG00000017639	tnpo3	100	99.313	Gambusia_affinis
ENSPREG00000019847	tnpo3	100	90.034	ENSHCOG00000007221	tnpo3	63	86.735	Hippocampus_comes
ENSPREG00000019847	tnpo3	70	32.227	ENSOANG00000006305	-	77	32.227	Ornithorhynchus_anatinus
ENSPREG00000019847	tnpo3	77	80.889	ENSPSIG00000006156	-	57	80.889	Pelodiscus_sinensis
ENSPREG00000019847	tnpo3	100	93.471	ENSPMGG00000009763	tnpo3	53	93.471	Periophthalmus_magnuspinnatus
ENSPREG00000019847	tnpo3	100	99.313	ENSPMEG00000022731	tnpo3	66	99.313	Poecilia_mexicana
ENSPREG00000019847	tnpo3	100	85.223	ENSSSCG00000016572	TNPO3	65	85.223	Sus_scrofa
ENSPREG00000019847	tnpo3	65	82.632	ENSTGUG00000016200	-	98	82.632	Taeniopygia_guttata
ENSPREG00000019847	tnpo3	100	85.911	ENSTRUG00000025251	tnpo3	100	84.983	Takifugu_rubripes
ENSPREG00000019847	tnpo3	100	98.969	ENSXCOG00000011552	tnpo3	100	98.969	Xiphophorus_couchianus
ENSPREG00000019847	tnpo3	69	30.357	ENSXCOG00000007569	-	80	31.963	Xiphophorus_couchianus