EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000019851 (Gene tree)
Gene ID: 103468573
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 3851 bases
Position: chrLG8:10075684-10079534
Accession: 103468573
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000029317	PseudoU_synth_2	PF00849.22	5.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000029650	-	2754	XM_008415710	ENSPREP00000029317	304 (aa)	XP_008413932	UPI0004A3ADB6

Gene Model

Click here to download ENSPREG00000019851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000019851's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000019851	rpusd1	98	56.536	ENSG00000007376	RPUSD1	99	67.066	Homo_sapiens
ENSPREG00000019851	rpusd1	100	81.373	ENSAPOG00000022221	rpusd1	99	81.877	Acanthochromis_polyacanthus
ENSPREG00000019851	rpusd1	98	59.667	ENSAMEG00000007461	RPUSD1	98	59.667	Ailuropoda_melanoleuca
ENSPREG00000019851	rpusd1	100	79.167	ENSACIG00000015863	rpusd1	100	80.323	Amphilophus_citrinellus
ENSPREG00000019851	rpusd1	100	82.524	ENSAOCG00000021975	rpusd1	97	82.524	Amphiprion_ocellaris
ENSPREG00000019851	rpusd1	100	82.848	ENSAPEG00000001316	rpusd1	97	82.848	Amphiprion_percula
ENSPREG00000019851	rpusd1	100	80.259	ENSATEG00000002984	rpusd1	99	80.259	Anabas_testudineus
ENSPREG00000019851	rpusd1	77	59.494	ENSAPLG00000012316	RPUSD1	98	59.494	Anas_platyrhynchos
ENSPREG00000019851	rpusd1	98	63.545	ENSACAG00000008953	RPUSD1	99	63.545	Anolis_carolinensis
ENSPREG00000019851	rpusd1	98	56.678	ENSANAG00000024709	RPUSD1	98	57.190	Aotus_nancymaae
ENSPREG00000019851	rpusd1	100	80.707	ENSACLG00000013692	rpusd1	100	80.707	Astatotilapia_calliptera
ENSPREG00000019851	rpusd1	99	70.764	ENSAMXG00000019802	rpusd1	99	70.764	Astyanax_mexicanus
ENSPREG00000019851	rpusd1	98	60.465	ENSBTAG00000000179	RPUSD1	98	60.465	Bos_taurus
ENSPREG00000019851	rpusd1	98	56.090	ENSCJAG00000012253	RPUSD1	98	57.516	Callithrix_jacchus
ENSPREG00000019851	rpusd1	98	58.000	ENSCAFG00000019614	RPUSD1	98	59.000	Canis_familiaris
ENSPREG00000019851	rpusd1	98	58.000	ENSCAFG00020008891	RPUSD1	98	59.000	Canis_lupus_dingo
ENSPREG00000019851	rpusd1	98	61.130	ENSCHIG00000012872	RPUSD1	98	61.130	Capra_hircus
ENSPREG00000019851	rpusd1	98	57.143	ENSTSYG00000036934	RPUSD1	98	57.143	Carlito_syrichta
ENSPREG00000019851	rpusd1	98	58.000	ENSCAPG00000014219	RPUSD1	98	58.000	Cavia_aperea
ENSPREG00000019851	rpusd1	98	58.000	ENSCPOG00000034604	RPUSD1	98	58.000	Cavia_porcellus
ENSPREG00000019851	rpusd1	98	57.003	ENSCCAG00000034385	RPUSD1	98	57.516	Cebus_capucinus
ENSPREG00000019851	rpusd1	98	55.172	ENSCATG00000042983	RPUSD1	98	57.655	Cercocebus_atys
ENSPREG00000019851	rpusd1	98	56.667	ENSCLAG00000013966	RPUSD1	98	56.766	Chinchilla_lanigera
ENSPREG00000019851	rpusd1	98	56.721	ENSCSAG00000012121	RPUSD1	98	57.190	Chlorocebus_sabaeus
ENSPREG00000019851	rpusd1	98	62.252	ENSCPBG00000021101	RPUSD1	99	62.252	Chrysemys_picta_bellii
ENSPREG00000019851	rpusd1	83	64.032	ENSCANG00000028576	RPUSD1	90	64.032	Colobus_angolensis_palliatus
ENSPREG00000019851	rpusd1	98	59.136	ENSCGRG00001014253	Rpusd1	98	59.136	Cricetulus_griseus_chok1gshd
ENSPREG00000019851	rpusd1	98	59.136	ENSCGRG00000017995	Rpusd1	98	59.136	Cricetulus_griseus_crigri
ENSPREG00000019851	rpusd1	99	76.744	ENSCSEG00000018512	rpusd1	99	76.744	Cynoglossus_semilaevis
ENSPREG00000019851	rpusd1	100	90.789	ENSCVAG00000022746	rpusd1	100	90.789	Cyprinodon_variegatus
ENSPREG00000019851	rpusd1	98	71.237	ENSDARG00000060192	rpusd1	99	71.237	Danio_rerio
ENSPREG00000019851	rpusd1	98	56.291	ENSDNOG00000003721	RPUSD1	98	55.960	Dasypus_novemcinctus
ENSPREG00000019851	rpusd1	98	58.000	ENSDORG00000026656	Rpusd1	98	58.667	Dipodomys_ordii
ENSPREG00000019851	rpusd1	96	47.403	ENSEBUG00000008767	rpusd1	92	47.403	Eptatretus_burgeri
ENSPREG00000019851	rpusd1	98	56.958	ENSEASG00005018421	RPUSD1	74	56.958	Equus_asinus_asinus
ENSPREG00000019851	rpusd1	100	69.745	ENSELUG00000014307	rpusd1	90	70.779	Esox_lucius
ENSPREG00000019851	rpusd1	98	58.333	ENSFCAG00000010359	RPUSD1	98	58.333	Felis_catus
ENSPREG00000019851	rpusd1	98	65.886	ENSFALG00000003211	RPUSD1	99	65.886	Ficedula_albicollis
ENSPREG00000019851	rpusd1	98	57.667	ENSFDAG00000013398	RPUSD1	98	57.667	Fukomys_damarensis
ENSPREG00000019851	rpusd1	100	87.622	ENSFHEG00000004736	rpusd1	100	90.554	Fundulus_heteroclitus
ENSPREG00000019851	rpusd1	99	71.987	ENSGMOG00000010756	rpusd1	99	72.313	Gadus_morhua
ENSPREG00000019851	rpusd1	98	64.686	ENSGALG00000005315	RPUSD1	99	64.686	Gallus_gallus
ENSPREG00000019851	rpusd1	100	96.053	ENSGAFG00000009886	rpusd1	100	96.053	Gambusia_affinis
ENSPREG00000019851	rpusd1	100	78.964	ENSGACG00000014276	rpusd1	100	78.964	Gasterosteus_aculeatus
ENSPREG00000019851	rpusd1	98	61.921	ENSGAGG00000004181	RPUSD1	99	61.921	Gopherus_agassizii
ENSPREG00000019851	rpusd1	98	57.329	ENSGGOG00000013997	RPUSD1	98	57.655	Gorilla_gorilla
ENSPREG00000019851	rpusd1	100	81.029	ENSHBUG00000023728	rpusd1	100	81.029	Haplochromis_burtoni
ENSPREG00000019851	rpusd1	98	57.000	ENSHGLG00000002595	RPUSD1	98	57.000	Heterocephalus_glaber_female
ENSPREG00000019851	rpusd1	98	57.000	ENSHGLG00100014303	RPUSD1	98	57.000	Heterocephalus_glaber_male
ENSPREG00000019851	rpusd1	99	73.856	ENSHCOG00000002390	rpusd1	99	73.856	Hippocampus_comes
ENSPREG00000019851	rpusd1	98	67.450	ENSIPUG00000001570	rpusd1	99	67.224	Ictalurus_punctatus
ENSPREG00000019851	rpusd1	98	58.000	ENSSTOG00000004276	RPUSD1	98	58.000	Ictidomys_tridecemlineatus
ENSPREG00000019851	rpusd1	98	58.472	ENSJJAG00000015696	Rpusd1	98	58.804	Jaculus_jaculus
ENSPREG00000019851	rpusd1	99	86.469	ENSKMAG00000017287	rpusd1	99	86.469	Kryptolebias_marmoratus
ENSPREG00000019851	rpusd1	100	79.288	ENSLBEG00000013354	RPUSD1	99	79.288	Labrus_bergylta
ENSPREG00000019851	rpusd1	100	79.288	ENSLBEG00000022502	rpusd1	99	79.288	Labrus_bergylta
ENSPREG00000019851	rpusd1	98	63.816	ENSLACG00000008869	RPUSD1	99	63.816	Latimeria_chalumnae
ENSPREG00000019851	rpusd1	70	82.710	ENSLOCG00000005682	rpusd1	99	82.710	Lepisosteus_oculatus
ENSPREG00000019851	rpusd1	98	56.667	ENSLAFG00000002115	RPUSD1	98	56.667	Loxodonta_africana
ENSPREG00000019851	rpusd1	98	57.190	ENSMFAG00000003961	RPUSD1	98	57.655	Macaca_fascicularis
ENSPREG00000019851	rpusd1	98	57.190	ENSMMUG00000000842	RPUSD1	98	57.655	Macaca_mulatta
ENSPREG00000019851	rpusd1	98	57.190	ENSMNEG00000042712	RPUSD1	98	57.655	Macaca_nemestrina
ENSPREG00000019851	rpusd1	98	57.190	ENSMLEG00000030591	RPUSD1	98	57.655	Mandrillus_leucophaeus
ENSPREG00000019851	rpusd1	100	82.581	ENSMAMG00000004735	rpusd1	99	82.581	Mastacembelus_armatus
ENSPREG00000019851	rpusd1	100	80.707	ENSMZEG00005003214	rpusd1	100	80.707	Maylandia_zebra
ENSPREG00000019851	rpusd1	96	64.983	ENSMGAG00000005447	RPUSD1	98	64.983	Meleagris_gallopavo
ENSPREG00000019851	rpusd1	83	57.312	ENSMAUG00000019998	Rpusd1	96	57.312	Mesocricetus_auratus
ENSPREG00000019851	rpusd1	98	56.667	ENSMICG00000017561	RPUSD1	98	56.667	Microcebus_murinus
ENSPREG00000019851	rpusd1	98	59.667	ENSMOCG00000014082	Rpusd1	98	59.667	Microtus_ochrogaster
ENSPREG00000019851	rpusd1	99	76.797	ENSMMOG00000012569	rpusd1	99	77.049	Mola_mola
ENSPREG00000019851	rpusd1	99	62.376	ENSMODG00000016882	RPUSD1	99	62.376	Monodelphis_domestica
ENSPREG00000019851	rpusd1	100	80.000	ENSMALG00000017818	rpusd1	99	80.645	Monopterus_albus
ENSPREG00000019851	rpusd1	98	59.667	MGP_CAROLIEiJ_G0021244	Rpusd1	98	59.667	Mus_caroli
ENSPREG00000019851	rpusd1	98	59.667	ENSMUSG00000041199	Rpusd1	98	59.667	Mus_musculus
ENSPREG00000019851	rpusd1	98	58.689	MGP_PahariEiJ_G0023562	Rpusd1	98	58.804	Mus_pahari
ENSPREG00000019851	rpusd1	98	59.667	MGP_SPRETEiJ_G0022155	Rpusd1	98	59.667	Mus_spretus
ENSPREG00000019851	rpusd1	96	57.627	ENSMPUG00000015897	RPUSD1	96	57.912	Mustela_putorius_furo
ENSPREG00000019851	rpusd1	98	57.237	ENSMLUG00000001089	RPUSD1	98	57.705	Myotis_lucifugus
ENSPREG00000019851	rpusd1	98	58.333	ENSNGAG00000003595	Rpusd1	98	57.843	Nannospalax_galili
ENSPREG00000019851	rpusd1	100	80.592	ENSNBRG00000006457	rpusd1	100	80.592	Neolamprologus_brichardi
ENSPREG00000019851	rpusd1	53	48.824	ENSNLEG00000008424	-	97	49.123	Nomascus_leucogenys
ENSPREG00000019851	rpusd1	98	61.873	ENSMEUG00000016049	RPUSD1	98	61.873	Notamacropus_eugenii
ENSPREG00000019851	rpusd1	98	51.000	ENSOPRG00000008340	RPUSD1	98	51.000	Ochotona_princeps
ENSPREG00000019851	rpusd1	98	56.667	ENSODEG00000016945	RPUSD1	98	56.667	Octodon_degus
ENSPREG00000019851	rpusd1	99	80.844	ENSONIG00000015672	rpusd1	100	80.844	Oreochromis_niloticus
ENSPREG00000019851	rpusd1	100	77.632	ENSORLG00000013009	rpusd1	99	77.632	Oryzias_latipes
ENSPREG00000019851	rpusd1	100	77.705	ENSORLG00020010382	rpusd1	99	77.705	Oryzias_latipes_hni
ENSPREG00000019851	rpusd1	100	76.974	ENSORLG00015021354	rpusd1	99	76.974	Oryzias_latipes_hsok
ENSPREG00000019851	rpusd1	100	78.618	ENSOMEG00000021426	rpusd1	99	78.618	Oryzias_melastigma
ENSPREG00000019851	rpusd1	98	56.393	ENSOGAG00000003795	RPUSD1	98	56.311	Otolemur_garnettii
ENSPREG00000019851	rpusd1	98	60.797	ENSOARG00000014254	RPUSD1	98	60.797	Ovis_aries
ENSPREG00000019851	rpusd1	98	56.863	ENSPPAG00000034797	RPUSD1	98	57.190	Pan_paniscus
ENSPREG00000019851	rpusd1	98	58.667	ENSPPRG00000012389	RPUSD1	98	58.667	Panthera_pardus
ENSPREG00000019851	rpusd1	99	58.609	ENSPTIG00000008545	RPUSD1	77	73.267	Panthera_tigris_altaica
ENSPREG00000019851	rpusd1	98	56.863	ENSPTRG00000007565	RPUSD1	98	57.190	Pan_troglodytes
ENSPREG00000019851	rpusd1	98	57.190	ENSPANG00000024401	RPUSD1	98	57.655	Papio_anubis
ENSPREG00000019851	rpusd1	100	69.079	ENSPKIG00000018890	rpusd1	91	69.079	Paramormyrops_kingsleyae
ENSPREG00000019851	rpusd1	98	64.570	ENSPSIG00000013945	RPUSD1	99	64.570	Pelodiscus_sinensis
ENSPREG00000019851	rpusd1	100	75.325	ENSPMGG00000014950	rpusd1	99	75.325	Periophthalmus_magnuspinnatus
ENSPREG00000019851	rpusd1	98	58.667	ENSPEMG00000000497	Rpusd1	98	58.667	Peromyscus_maniculatus_bairdii
ENSPREG00000019851	rpusd1	99	53.947	ENSPMAG00000001563	rpusd1	99	54.605	Petromyzon_marinus
ENSPREG00000019851	rpusd1	98	63.211	ENSPCIG00000021216	-	92	63.211	Phascolarctos_cinereus
ENSPREG00000019851	rpusd1	100	97.039	ENSPFOG00000007946	rpusd1	100	97.039	Poecilia_formosa
ENSPREG00000019851	rpusd1	100	97.368	ENSPLAG00000011925	rpusd1	100	97.368	Poecilia_latipinna
ENSPREG00000019851	rpusd1	100	97.039	ENSPMEG00000002910	rpusd1	100	97.039	Poecilia_mexicana
ENSPREG00000019851	rpusd1	98	44.518	ENSPCAG00000002258	RPUSD1	98	44.518	Procavia_capensis
ENSPREG00000019851	rpusd1	98	55.738	ENSPCOG00000022582	RPUSD1	98	56.066	Propithecus_coquereli
ENSPREG00000019851	rpusd1	98	52.787	ENSPVAG00000013104	RPUSD1	98	53.922	Pteropus_vampyrus
ENSPREG00000019851	rpusd1	100	81.029	ENSPNYG00000024076	rpusd1	100	81.029	Pundamilia_nyererei
ENSPREG00000019851	rpusd1	99	68.771	ENSPNAG00000013806	rpusd1	99	68.771	Pygocentrus_nattereri
ENSPREG00000019851	rpusd1	98	59.667	ENSRNOG00000023639	Rpusd1	98	59.406	Rattus_norvegicus
ENSPREG00000019851	rpusd1	98	57.516	ENSRBIG00000030238	RPUSD1	98	57.843	Rhinopithecus_bieti
ENSPREG00000019851	rpusd1	98	57.516	ENSRROG00000036663	RPUSD1	98	57.843	Rhinopithecus_roxellana
ENSPREG00000019851	rpusd1	98	58.333	ENSSBOG00000033063	RPUSD1	98	59.000	Saimiri_boliviensis_boliviensis
ENSPREG00000019851	rpusd1	98	62.207	ENSSHAG00000013500	RPUSD1	98	62.207	Sarcophilus_harrisii
ENSPREG00000019851	rpusd1	98	72.241	ENSSFOG00015014394	rpusd1	99	72.241	Scleropages_formosus
ENSPREG00000019851	rpusd1	100	82.848	ENSSMAG00000008045	rpusd1	93	82.848	Scophthalmus_maximus
ENSPREG00000019851	rpusd1	100	83.495	ENSSDUG00000001829	rpusd1	97	83.495	Seriola_dumerili
ENSPREG00000019851	rpusd1	100	83.495	ENSSLDG00000020853	rpusd1	97	83.495	Seriola_lalandi_dorsalis
ENSPREG00000019851	rpusd1	54	72.892	ENSSARG00000011187	-	99	72.892	Sorex_araneus
ENSPREG00000019851	rpusd1	62	62.963	ENSSPUG00000005119	-	98	62.963	Sphenodon_punctatus
ENSPREG00000019851	rpusd1	100	85.113	ENSSPAG00000012708	rpusd1	99	85.113	Stegastes_partitus
ENSPREG00000019851	rpusd1	98	57.705	ENSSSCG00000008000	RPUSD1	98	65.354	Sus_scrofa
ENSPREG00000019851	rpusd1	82	71.084	ENSTGUG00000015375	RPUSD1	98	71.084	Taeniopygia_guttata
ENSPREG00000019851	rpusd1	100	74.757	ENSTRUG00000003041	rpusd1	99	77.023	Takifugu_rubripes
ENSPREG00000019851	rpusd1	99	71.429	ENSTNIG00000002660	rpusd1	99	71.429	Tetraodon_nigroviridis
ENSPREG00000019851	rpusd1	98	58.689	ENSTTRG00000010167	RPUSD1	98	59.150	Tursiops_truncatus
ENSPREG00000019851	rpusd1	98	58.940	ENSUAMG00000012736	RPUSD1	98	59.272	Ursus_americanus
ENSPREG00000019851	rpusd1	98	59.000	ENSUMAG00000021174	RPUSD1	94	63.707	Ursus_maritimus
ENSPREG00000019851	rpusd1	98	59.667	ENSVVUG00000012357	RPUSD1	98	59.667	Vulpes_vulpes
ENSPREG00000019851	rpusd1	98	64.883	ENSXETG00000007184	rpusd1	98	64.883	Xenopus_tropicalis
ENSPREG00000019851	rpusd1	100	95.395	ENSXCOG00000017930	rpusd1	100	95.395	Xiphophorus_couchianus
ENSPREG00000019851	rpusd1	100	95.724	ENSXMAG00000024084	rpusd1	100	95.724	Xiphophorus_maculatus