EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000019955 (Gene tree)
Gene ID: 103464195
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: RAD54 like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 22583 bases
Position: chrLG4:30593813-30616395
Accession: 103464195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000029484	ResIII	PF04851.15	1.4e-07	1	1
ENSPREP00000029466	ResIII	PF04851.15	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000029817	-	3267	-	ENSPREP00000029484	714 (aa)	-	-
ENSPRET00000029799	-	3342	XM_008408143	ENSPREP00000029466	739 (aa)	XP_008406365	UPI0004A4FE92

Gene Model

Click here to download ENSPREG00000019955's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000019955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000019955	rad54l	68	30.862	ENSPREG00000017885	chd1l	51	30.862
ENSPREG00000019955	rad54l	89	42.213	ENSPREG00000018443	rad54b	77	42.442
ENSPREG00000019955	rad54l	68	30.926	ENSPREG00000018185	smarcad1a	52	30.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000019955	rad54l	99	77.807	ENSG00000085999	RAD54L	100	84.000	Homo_sapiens
ENSPREG00000019955	rad54l	99	83.875	ENSAPOG00000011643	rad54l	99	83.875	Acanthochromis_polyacanthus
ENSPREG00000019955	rad54l	99	76.644	ENSAMEG00000013902	RAD54L	99	76.644	Ailuropoda_melanoleuca
ENSPREG00000019955	rad54l	99	83.897	ENSACIG00000001939	rad54l	99	83.897	Amphilophus_citrinellus
ENSPREG00000019955	rad54l	99	87.415	ENSAOCG00000017576	rad54l	100	87.415	Amphiprion_ocellaris
ENSPREG00000019955	rad54l	96	87.815	ENSAPEG00000020658	rad54l	99	87.815	Amphiprion_percula
ENSPREG00000019955	rad54l	95	89.174	ENSATEG00000006767	rad54l	100	89.174	Anabas_testudineus
ENSPREG00000019955	rad54l	95	81.259	ENSAPLG00000006389	RAD54L	99	81.259	Anas_platyrhynchos
ENSPREG00000019955	rad54l	99	79.946	ENSACAG00000002312	RAD54L	99	79.946	Anolis_carolinensis
ENSPREG00000019955	rad54l	99	77.406	ENSANAG00000035439	RAD54L	99	77.406	Aotus_nancymaae
ENSPREG00000019955	rad54l	100	84.189	ENSACLG00000018711	rad54l	100	84.189	Astatotilapia_calliptera
ENSPREG00000019955	rad54l	100	82.615	ENSAMXG00000012777	rad54l	100	82.615	Astyanax_mexicanus
ENSPREG00000019955	rad54l	99	77.242	ENSBTAG00000019901	RAD54L	99	77.242	Bos_taurus
ENSPREG00000019955	rad54l	91	59.172	WBGene00004298	rad-54	82	59.172	Caenorhabditis_elegans
ENSPREG00000019955	rad54l	99	75.770	ENSCJAG00000021080	RAD54L	94	77.184	Callithrix_jacchus
ENSPREG00000019955	rad54l	99	77.212	ENSCAFG00000004272	RAD54L	99	77.212	Canis_familiaris
ENSPREG00000019955	rad54l	99	77.181	ENSCAFG00020015066	RAD54L	99	77.181	Canis_lupus_dingo
ENSPREG00000019955	rad54l	99	77.212	ENSCHIG00000020118	RAD54L	99	77.212	Capra_hircus
ENSPREG00000019955	rad54l	99	77.108	ENSTSYG00000002032	RAD54L	99	77.108	Carlito_syrichta
ENSPREG00000019955	rad54l	99	77.614	ENSCPOG00000006768	RAD54L	99	77.614	Cavia_porcellus
ENSPREG00000019955	rad54l	99	77.807	ENSCCAG00000025783	RAD54L	99	77.807	Cebus_capucinus
ENSPREG00000019955	rad54l	99	77.540	ENSCATG00000030589	RAD54L	99	77.540	Cercocebus_atys
ENSPREG00000019955	rad54l	99	78.016	ENSCLAG00000004645	RAD54L	99	78.016	Chinchilla_lanigera
ENSPREG00000019955	rad54l	99	77.406	ENSCSAG00000001229	RAD54L	99	77.406	Chlorocebus_sabaeus
ENSPREG00000019955	rad54l	99	79.273	ENSCPBG00000005675	RAD54L	99	79.273	Chrysemys_picta_bellii
ENSPREG00000019955	rad54l	100	62.242	ENSCING00000024456	-	100	62.242	Ciona_intestinalis
ENSPREG00000019955	rad54l	100	62.696	ENSCSAVG00000010859	-	100	62.696	Ciona_savignyi
ENSPREG00000019955	rad54l	99	77.406	ENSCANG00000034891	RAD54L	99	77.406	Colobus_angolensis_palliatus
ENSPREG00000019955	rad54l	99	76.312	ENSCGRG00001014807	Rad54l	99	76.312	Cricetulus_griseus_chok1gshd
ENSPREG00000019955	rad54l	99	76.312	ENSCGRG00000016038	Rad54l	99	76.312	Cricetulus_griseus_crigri
ENSPREG00000019955	rad54l	99	84.532	ENSCSEG00000001983	rad54l	99	84.532	Cynoglossus_semilaevis
ENSPREG00000019955	rad54l	87	93.522	ENSCVAG00000019561	rad54l	99	93.522	Cyprinodon_variegatus
ENSPREG00000019955	rad54l	100	81.597	ENSDARG00000018623	rad54l	100	81.597	Danio_rerio
ENSPREG00000019955	rad54l	99	76.810	ENSDNOG00000003395	RAD54L	99	76.810	Dasypus_novemcinctus
ENSPREG00000019955	rad54l	99	71.126	ENSDORG00000002632	Rad54l	99	71.258	Dipodomys_ordii
ENSPREG00000019955	rad54l	99	53.548	FBgn0002989	okr	95	53.548	Drosophila_melanogaster
ENSPREG00000019955	rad54l	78	75.546	ENSETEG00000000550	RAD54L	78	75.546	Echinops_telfairi
ENSPREG00000019955	rad54l	99	77.224	ENSEASG00005004511	RAD54L	96	80.896	Equus_asinus_asinus
ENSPREG00000019955	rad54l	99	77.480	ENSECAG00000008760	RAD54L	99	77.758	Equus_caballus
ENSPREG00000019955	rad54l	99	75.335	ENSEEUG00000008113	RAD54L	99	75.335	Erinaceus_europaeus
ENSPREG00000019955	rad54l	100	84.161	ENSELUG00000002295	rad54l	100	84.161	Esox_lucius
ENSPREG00000019955	rad54l	99	76.944	ENSFCAG00000003444	RAD54L	99	76.944	Felis_catus
ENSPREG00000019955	rad54l	99	78.898	ENSFALG00000009480	RAD54L	99	78.735	Ficedula_albicollis
ENSPREG00000019955	rad54l	99	77.212	ENSFDAG00000007806	RAD54L	99	77.212	Fukomys_damarensis
ENSPREG00000019955	rad54l	65	87.110	ENSFHEG00000009824	rad54l	82	87.110	Fundulus_heteroclitus
ENSPREG00000019955	rad54l	99	82.273	ENSGMOG00000014568	rad54l	100	82.273	Gadus_morhua
ENSPREG00000019955	rad54l	99	79.757	ENSGALG00000010356	RAD54L	92	79.757	Gallus_gallus
ENSPREG00000019955	rad54l	91	97.177	ENSGAFG00000011110	rad54l	100	97.177	Gambusia_affinis
ENSPREG00000019955	rad54l	100	86.505	ENSGACG00000003111	rad54l	98	86.505	Gasterosteus_aculeatus
ENSPREG00000019955	rad54l	99	78.302	ENSGAGG00000014089	RAD54L	96	78.302	Gopherus_agassizii
ENSPREG00000019955	rad54l	99	77.540	ENSGGOG00000010602	RAD54L	99	77.540	Gorilla_gorilla
ENSPREG00000019955	rad54l	100	84.324	ENSHBUG00000007793	rad54l	100	84.324	Haplochromis_burtoni
ENSPREG00000019955	rad54l	99	77.212	ENSHGLG00000000753	RAD54L	99	77.212	Heterocephalus_glaber_female
ENSPREG00000019955	rad54l	99	76.944	ENSHGLG00100016987	RAD54L	99	76.944	Heterocephalus_glaber_male
ENSPREG00000019955	rad54l	100	80.780	ENSIPUG00000015999	rad54l	100	83.357	Ictalurus_punctatus
ENSPREG00000019955	rad54l	99	76.944	ENSSTOG00000029125	RAD54L	99	76.944	Ictidomys_tridecemlineatus
ENSPREG00000019955	rad54l	99	64.477	ENSJJAG00000000235	-	99	64.477	Jaculus_jaculus
ENSPREG00000019955	rad54l	100	85.656	ENSKMAG00000009944	rad54l	100	85.656	Kryptolebias_marmoratus
ENSPREG00000019955	rad54l	99	86.567	ENSLBEG00000014617	rad54l	97	89.732	Labrus_bergylta
ENSPREG00000019955	rad54l	100	82.075	ENSLOCG00000004144	rad54l	100	83.333	Lepisosteus_oculatus
ENSPREG00000019955	rad54l	99	77.584	ENSLAFG00000007583	RAD54L	99	77.987	Loxodonta_africana
ENSPREG00000019955	rad54l	99	77.540	ENSMFAG00000031241	RAD54L	99	77.540	Macaca_fascicularis
ENSPREG00000019955	rad54l	99	77.540	ENSMMUG00000011568	RAD54L	99	77.540	Macaca_mulatta
ENSPREG00000019955	rad54l	99	77.406	ENSMNEG00000038562	RAD54L	99	77.406	Macaca_nemestrina
ENSPREG00000019955	rad54l	99	77.540	ENSMLEG00000038145	RAD54L	99	77.540	Mandrillus_leucophaeus
ENSPREG00000019955	rad54l	99	84.688	ENSMAMG00000022180	rad54l	99	86.854	Mastacembelus_armatus
ENSPREG00000019955	rad54l	100	84.054	ENSMZEG00005018081	rad54l	100	84.054	Maylandia_zebra
ENSPREG00000019955	rad54l	99	79.595	ENSMGAG00000010634	RAD54L	99	79.595	Meleagris_gallopavo
ENSPREG00000019955	rad54l	99	76.851	ENSMAUG00000020076	Rad54l	99	76.851	Mesocricetus_auratus
ENSPREG00000019955	rad54l	99	77.882	ENSMICG00000003266	RAD54L	99	77.882	Microcebus_murinus
ENSPREG00000019955	rad54l	99	77.389	ENSMOCG00000001778	Rad54l	99	77.389	Microtus_ochrogaster
ENSPREG00000019955	rad54l	99	85.774	ENSMALG00000021148	rad54l	99	85.774	Monopterus_albus
ENSPREG00000019955	rad54l	99	72.881	MGP_CAROLIEiJ_G0026325	Rad54l	99	72.881	Mus_caroli
ENSPREG00000019955	rad54l	99	76.542	ENSMUSG00000028702	Rad54l	99	76.542	Mus_musculus
ENSPREG00000019955	rad54l	99	76.510	MGP_PahariEiJ_G0028657	Rad54l	99	76.510	Mus_pahari
ENSPREG00000019955	rad54l	99	76.676	MGP_SPRETEiJ_G0027297	Rad54l	99	76.676	Mus_spretus
ENSPREG00000019955	rad54l	99	76.944	ENSMPUG00000012883	RAD54L	99	76.944	Mustela_putorius_furo
ENSPREG00000019955	rad54l	99	77.718	ENSMLUG00000003763	RAD54L	99	77.718	Myotis_lucifugus
ENSPREG00000019955	rad54l	99	76.779	ENSNGAG00000024213	Rad54l	99	76.779	Nannospalax_galili
ENSPREG00000019955	rad54l	99	77.406	ENSNLEG00000016548	RAD54L	99	77.406	Nomascus_leucogenys
ENSPREG00000019955	rad54l	91	77.151	ENSMEUG00000006793	RAD54L	100	77.151	Notamacropus_eugenii
ENSPREG00000019955	rad54l	94	81.185	ENSOPRG00000016016	RAD54L	90	81.185	Ochotona_princeps
ENSPREG00000019955	rad54l	99	77.748	ENSODEG00000008519	RAD54L	99	77.748	Octodon_degus
ENSPREG00000019955	rad54l	100	84.595	ENSONIG00000007659	rad54l	100	84.595	Oreochromis_niloticus
ENSPREG00000019955	rad54l	99	77.882	ENSOCUG00000005229	RAD54L	99	77.882	Oryctolagus_cuniculus
ENSPREG00000019955	rad54l	99	82.520	ENSORLG00000002958	rad54l	99	83.198	Oryzias_latipes
ENSPREG00000019955	rad54l	99	83.198	ENSORLG00020006554	rad54l	99	86.726	Oryzias_latipes_hni
ENSPREG00000019955	rad54l	99	82.791	ENSORLG00015002907	rad54l	99	83.198	Oryzias_latipes_hsok
ENSPREG00000019955	rad54l	99	83.062	ENSOMEG00000007770	rad54l	99	83.062	Oryzias_melastigma
ENSPREG00000019955	rad54l	99	77.273	ENSOARG00000002264	RAD54L	99	77.273	Ovis_aries
ENSPREG00000019955	rad54l	99	77.674	ENSPPAG00000031222	RAD54L	99	77.674	Pan_paniscus
ENSPREG00000019955	rad54l	99	76.841	ENSPPRG00000010317	RAD54L	99	76.841	Panthera_pardus
ENSPREG00000019955	rad54l	99	76.841	ENSPTIG00000012200	RAD54L	99	76.841	Panthera_tigris_altaica
ENSPREG00000019955	rad54l	99	77.674	ENSPTRG00000000689	RAD54L	99	77.674	Pan_troglodytes
ENSPREG00000019955	rad54l	99	77.540	ENSPANG00000016295	RAD54L	99	77.540	Papio_anubis
ENSPREG00000019955	rad54l	99	77.069	ENSPKIG00000016172	rad54l	99	77.069	Paramormyrops_kingsleyae
ENSPREG00000019955	rad54l	99	79.292	ENSPSIG00000003258	RAD54L	99	79.292	Pelodiscus_sinensis
ENSPREG00000019955	rad54l	99	78.184	ENSPMGG00000016335	rad54l	99	78.184	Periophthalmus_magnuspinnatus
ENSPREG00000019955	rad54l	99	76.985	ENSPEMG00000011422	Rad54l	99	76.985	Peromyscus_maniculatus_bairdii
ENSPREG00000019955	rad54l	99	69.044	ENSPMAG00000007719	rad54l	99	69.044	Petromyzon_marinus
ENSPREG00000019955	rad54l	100	77.419	ENSPCIG00000029032	RAD54L	100	77.554	Phascolarctos_cinereus
ENSPREG00000019955	rad54l	86	98.585	ENSPFOG00000013732	rad54l	100	98.585	Poecilia_formosa
ENSPREG00000019955	rad54l	82	95.455	ENSPLAG00000023416	rad54l	99	95.455	Poecilia_latipinna
ENSPREG00000019955	rad54l	91	98.068	ENSPMEG00000008299	rad54l	100	98.068	Poecilia_mexicana
ENSPREG00000019955	rad54l	99	64.257	ENSPPYG00000001398	RAD54L	99	65.596	Pongo_abelii
ENSPREG00000019955	rad54l	82	78.641	ENSPCAG00000005323	RAD54L	80	78.641	Procavia_capensis
ENSPREG00000019955	rad54l	99	77.346	ENSPCOG00000015423	RAD54L	99	77.346	Propithecus_coquereli
ENSPREG00000019955	rad54l	99	80.054	ENSPNYG00000002942	rad54l	99	80.054	Pundamilia_nyererei
ENSPREG00000019955	rad54l	100	82.996	ENSPNAG00000012483	rad54l	100	82.996	Pygocentrus_nattereri
ENSPREG00000019955	rad54l	99	76.273	ENSRNOG00000013148	Rad54l	99	76.273	Rattus_norvegicus
ENSPREG00000019955	rad54l	99	77.480	ENSRBIG00000043495	RAD54L	99	77.480	Rhinopithecus_bieti
ENSPREG00000019955	rad54l	99	77.540	ENSRROG00000020844	RAD54L	99	77.540	Rhinopithecus_roxellana
ENSPREG00000019955	rad54l	81	48.678	YGL163C	RAD54	71	48.834	Saccharomyces_cerevisiae
ENSPREG00000019955	rad54l	99	77.674	ENSSBOG00000024672	RAD54L	99	77.674	Saimiri_boliviensis_boliviensis
ENSPREG00000019955	rad54l	100	77.480	ENSSHAG00000000110	RAD54L	100	77.480	Sarcophilus_harrisii
ENSPREG00000019955	rad54l	100	86.892	ENSSDUG00000019147	rad54l	100	86.892	Seriola_dumerili
ENSPREG00000019955	rad54l	100	86.622	ENSSLDG00000012330	rad54l	100	86.622	Seriola_lalandi_dorsalis
ENSPREG00000019955	rad54l	84	76.886	ENSSARG00000006689	RAD54L	100	76.886	Sorex_araneus
ENSPREG00000019955	rad54l	99	85.656	ENSSPAG00000011016	rad54l	100	85.656	Stegastes_partitus
ENSPREG00000019955	rad54l	99	77.212	ENSSSCG00000003905	RAD54L	99	77.212	Sus_scrofa
ENSPREG00000019955	rad54l	99	78.197	ENSTGUG00000008233	RAD54L	99	78.418	Taeniopygia_guttata
ENSPREG00000019955	rad54l	99	81.191	ENSTRUG00000008410	rad54l	99	81.191	Takifugu_rubripes
ENSPREG00000019955	rad54l	99	79.973	ENSTNIG00000004716	rad54l	99	80.135	Tetraodon_nigroviridis
ENSPREG00000019955	rad54l	99	72.788	ENSTTRG00000006315	RAD54L	99	72.788	Tursiops_truncatus
ENSPREG00000019955	rad54l	99	76.653	ENSUAMG00000011824	RAD54L	99	76.653	Ursus_americanus
ENSPREG00000019955	rad54l	99	75.439	ENSUMAG00000023603	RAD54L	99	75.439	Ursus_maritimus
ENSPREG00000019955	rad54l	99	77.346	ENSVVUG00000007201	RAD54L	99	77.346	Vulpes_vulpes
ENSPREG00000019955	rad54l	96	73.986	ENSXETG00000004369	rad54l	99	73.986	Xenopus_tropicalis
ENSPREG00000019955	rad54l	55	94.840	ENSXCOG00000016028	rad54l	82	97.878	Xiphophorus_couchianus