EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000019960 (Gene tree)
Gene ID: -
Gene Symbol: rrs1
Alias: fj66c04|wu:fj66c04|zgc:66358
Full Name: ribosome biogenesis regulator homolog
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 1059 bases
Position: chrLG20:15123809-15124867
Accession: 103456601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000029468	RRS1	PF04939.12	2.8e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000029801	-	927	XM_008396251	ENSPREP00000029468	308 (aa)	XP_008394473	-

Gene Model

Click here to download ENSPREG00000019960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000019960's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000019960	rrs1	98	53.134	ENSG00000179041	RRS1	83	58.361	Homo_sapiens
ENSPREG00000019960	rrs1	89	72.240	ENSATEG00000011743	rrs1	86	72.937	Anabas_testudineus
ENSPREG00000019960	rrs1	98	53.678	ENSANAG00000018116	RRS1	82	59.076	Aotus_nancymaae
ENSPREG00000019960	rrs1	94	58.405	ENSAMXG00000037893	rrs1	78	62.583	Astyanax_mexicanus
ENSPREG00000019960	rrs1	98	52.717	ENSBTAG00000016716	RRS1	83	57.049	Bos_taurus
ENSPREG00000019960	rrs1	70	37.778	WBGene00007617	rrbs-1	79	37.778	Caenorhabditis_elegans
ENSPREG00000019960	rrs1	98	54.076	ENSCJAG00000022034	RRS1	83	58.361	Callithrix_jacchus
ENSPREG00000019960	rrs1	98	52.044	ENSCAFG00000007313	RRS1	83	57.377	Canis_familiaris
ENSPREG00000019960	rrs1	98	52.044	ENSCAFG00020020365	-	83	57.377	Canis_lupus_dingo
ENSPREG00000019960	rrs1	98	52.044	ENSCAFG00020016049	-	83	57.377	Canis_lupus_dingo
ENSPREG00000019960	rrs1	98	52.044	ENSCHIG00000009141	RRS1	83	57.377	Capra_hircus
ENSPREG00000019960	rrs1	83	58.746	ENSCPOG00000000647	RRS1	85	58.689	Cavia_porcellus
ENSPREG00000019960	rrs1	98	54.891	ENSCCAG00000032186	RRS1	83	59.344	Cebus_capucinus
ENSPREG00000019960	rrs1	98	53.406	ENSCATG00000016944	RRS1	83	59.016	Cercocebus_atys
ENSPREG00000019960	rrs1	98	52.861	ENSCSAG00000018552	RRS1	83	58.689	Chlorocebus_sabaeus
ENSPREG00000019960	rrs1	88	57.413	ENSCHOG00000002455	RRS1	83	58.033	Choloepus_hoffmanni
ENSPREG00000019960	rrs1	88	49.068	ENSCPBG00000021374	RRS1	88	49.355	Chrysemys_picta_bellii
ENSPREG00000019960	rrs1	79	46.367	ENSCING00000002177	-	89	46.207	Ciona_intestinalis
ENSPREG00000019960	rrs1	80	44.710	ENSCSAVG00000011819	-	89	45.172	Ciona_savignyi
ENSPREG00000019960	rrs1	98	54.348	ENSCANG00000012718	RRS1	83	59.016	Colobus_angolensis_palliatus
ENSPREG00000019960	rrs1	96	55.977	ENSCGRG00001002391	-	83	57.705	Cricetulus_griseus_chok1gshd
ENSPREG00000019960	rrs1	99	54.545	ENSCGRG00001015575	-	87	57.049	Cricetulus_griseus_chok1gshd
ENSPREG00000019960	rrs1	84	81.853	ENSCSEG00000014750	rrs1	83	81.853	Cynoglossus_semilaevis
ENSPREG00000019960	rrs1	84	90.385	ENSCVAG00000017878	rrs1	85	90.698	Cyprinodon_variegatus
ENSPREG00000019960	rrs1	83	67.559	ENSDARG00000003941	rrs1	86	67.559	Danio_rerio
ENSPREG00000019960	rrs1	88	55.975	ENSDNOG00000017900	RRS1	82	56.721	Dasypus_novemcinctus
ENSPREG00000019960	rrs1	56	52.511	ENSDORG00000026331	Rrs1	78	53.140	Dipodomys_ordii
ENSPREG00000019960	rrs1	96	41.143	FBgn0052409	CG32409	84	43.243	Drosophila_melanogaster
ENSPREG00000019960	rrs1	51	53.234	ENSETEG00000000935	-	55	53.234	Echinops_telfairi
ENSPREG00000019960	rrs1	87	45.659	ENSEBUG00000013506	rrs1	96	47.368	Eptatretus_burgeri
ENSPREG00000019960	rrs1	98	52.589	ENSEASG00005001691	RRS1	83	57.705	Equus_asinus_asinus
ENSPREG00000019960	rrs1	98	53.868	ENSECAG00000004492	RRS1	90	57.705	Equus_caballus
ENSPREG00000019960	rrs1	88	56.782	ENSEEUG00000013719	RRS1	83	57.049	Erinaceus_europaeus
ENSPREG00000019960	rrs1	98	52.044	ENSFCAG00000014332	RRS1	83	57.377	Felis_catus
ENSPREG00000019960	rrs1	81	47.508	ENSGALG00000030890	RRS1	87	48.232	Gallus_gallus
ENSPREG00000019960	rrs1	83	67.774	ENSGACG00000002969	rrs1	85	67.327	Gasterosteus_aculeatus
ENSPREG00000019960	rrs1	88	48.447	ENSGAGG00000023718	RRS1	85	50.325	Gopherus_agassizii
ENSPREG00000019960	rrs1	98	53.678	ENSGGOG00000026663	RRS1	83	59.016	Gorilla_gorilla
ENSPREG00000019960	rrs1	92	56.667	ENSHGLG00000021423	RRS1	82	58.746	Heterocephalus_glaber_female
ENSPREG00000019960	rrs1	92	56.667	ENSHGLG00100020640	RRS1	82	58.746	Heterocephalus_glaber_male
ENSPREG00000019960	rrs1	99	62.254	ENSHCOG00000015358	rrs1	84	65.781	Hippocampus_comes
ENSPREG00000019960	rrs1	82	63.636	ENSIPUG00000014412	rrs1	87	62.914	Ictalurus_punctatus
ENSPREG00000019960	rrs1	100	55.342	ENSSTOG00000026310	RRS1	83	58.689	Ictidomys_tridecemlineatus
ENSPREG00000019960	rrs1	76	50.360	ENSJJAG00000020395	-	81	50.360	Jaculus_jaculus
ENSPREG00000019960	rrs1	84	56.393	ENSJJAG00000011507	-	83	56.393	Jaculus_jaculus
ENSPREG00000019960	rrs1	84	72.848	ENSKMAG00000008238	rrs1	89	72.848	Kryptolebias_marmoratus
ENSPREG00000019960	rrs1	85	64.918	ENSLACG00000004058	RRS1	92	64.901	Latimeria_chalumnae
ENSPREG00000019960	rrs1	87	64.423	ENSLOCG00000017812	rrs1	88	64.570	Lepisosteus_oculatus
ENSPREG00000019960	rrs1	88	56.782	ENSLAFG00000015405	RRS1	82	57.756	Loxodonta_africana
ENSPREG00000019960	rrs1	98	53.406	ENSMFAG00000042747	RRS1	83	59.016	Macaca_fascicularis
ENSPREG00000019960	rrs1	98	53.406	ENSMMUG00000000886	RRS1	83	59.016	Macaca_mulatta
ENSPREG00000019960	rrs1	98	53.406	ENSMNEG00000011696	RRS1	83	59.016	Macaca_nemestrina
ENSPREG00000019960	rrs1	98	53.406	ENSMLEG00000004794	RRS1	83	59.016	Mandrillus_leucophaeus
ENSPREG00000019960	rrs1	82	73.154	ENSMZEG00005004349	RRS1	85	73.179	Maylandia_zebra
ENSPREG00000019960	rrs1	99	55.432	ENSMAUG00000005392	Rrs1	83	58.361	Mesocricetus_auratus
ENSPREG00000019960	rrs1	96	55.102	ENSMOCG00000015862	Rrs1	78	57.049	Microtus_ochrogaster
ENSPREG00000019960	rrs1	94	53.333	ENSMODG00000024952	RRS1	93	51.320	Monodelphis_domestica
ENSPREG00000019960	rrs1	99	55.182	MGP_CAROLIEiJ_G0013936	Rrs1	84	58.361	Mus_caroli
ENSPREG00000019960	rrs1	96	56.433	ENSMUSG00000061024	Rrs1	83	58.361	Mus_musculus
ENSPREG00000019960	rrs1	93	56.156	MGP_PahariEiJ_G0023883	Rrs1	83	57.705	Mus_pahari
ENSPREG00000019960	rrs1	99	55.000	MGP_SPRETEiJ_G0014739	Rrs1	83	58.361	Mus_spretus
ENSPREG00000019960	rrs1	96	55.102	ENSMPUG00000018626	RRS1	82	57.705	Mustela_putorius_furo
ENSPREG00000019960	rrs1	94	55.224	ENSNGAG00000012904	Rrs1	83	57.426	Nannospalax_galili
ENSPREG00000019960	rrs1	74	52.817	ENSNLEG00000027730	RRS1	74	56.637	Nomascus_leucogenys
ENSPREG00000019960	rrs1	94	71.386	ENSONIG00000014187	rrs1	88	73.510	Oreochromis_niloticus
ENSPREG00000019960	rrs1	98	49.714	ENSOANG00000012348	RRS1	82	50.987	Ornithorhynchus_anatinus
ENSPREG00000019960	rrs1	93	56.024	ENSOCUG00000013490	RRS1	91	55.162	Oryctolagus_cuniculus
ENSPREG00000019960	rrs1	89	85.714	ENSOMEG00000008525	rrs1	86	88.372	Oryzias_melastigma
ENSPREG00000019960	rrs1	92	54.848	ENSOGAG00000001085	RRS1	83	56.721	Otolemur_garnettii
ENSPREG00000019960	rrs1	98	50.565	ENSOARG00000017417	RRS1	81	53.443	Ovis_aries
ENSPREG00000019960	rrs1	98	53.406	ENSPPAG00000024378	RRS1	83	58.689	Pan_paniscus
ENSPREG00000019960	rrs1	98	51.771	ENSPPRG00000021408	RRS1	83	57.049	Panthera_pardus
ENSPREG00000019960	rrs1	98	53.134	ENSPTRG00000030988	RRS1	83	58.361	Pan_troglodytes
ENSPREG00000019960	rrs1	96	44.444	ENSPANG00000035974	RRS1	79	40.864	Papio_anubis
ENSPREG00000019960	rrs1	82	62.416	ENSPKIG00000007953	rrs1	87	62.416	Paramormyrops_kingsleyae
ENSPREG00000019960	rrs1	93	55.856	ENSPEMG00000014427	Rrs1	83	57.705	Peromyscus_maniculatus_bairdii
ENSPREG00000019960	rrs1	83	52.318	ENSPMAG00000006513	rrs1	79	52.318	Petromyzon_marinus
ENSPREG00000019960	rrs1	83	55.263	ENSPCIG00000026695	RRS1	84	55.263	Phascolarctos_cinereus
ENSPREG00000019960	rrs1	91	84.568	ENSPFOG00000020722	rrs1	93	83.775	Poecilia_formosa
ENSPREG00000019960	rrs1	81	59.060	ENSPPYG00000018637	RRS1	99	59.060	Pongo_abelii
ENSPREG00000019960	rrs1	92	56.839	ENSPCAG00000009115	RRS1	83	57.705	Procavia_capensis
ENSPREG00000019960	rrs1	80	65.870	ENSPNAG00000021707	rrs1	86	65.789	Pygocentrus_nattereri
ENSPREG00000019960	rrs1	99	54.167	ENSRNOG00000007240	Rrs1	83	58.033	Rattus_norvegicus
ENSPREG00000019960	rrs1	98	53.134	ENSRBIG00000009132	RRS1	83	58.689	Rhinopithecus_bieti
ENSPREG00000019960	rrs1	98	53.134	ENSRROG00000013472	RRS1	83	58.689	Rhinopithecus_roxellana
ENSPREG00000019960	rrs1	84	58.689	ENSSBOG00000011006	-	86	58.689	Saimiri_boliviensis_boliviensis
ENSPREG00000019960	rrs1	84	58.689	ENSSBOG00000012639	-	86	58.689	Saimiri_boliviensis_boliviensis
ENSPREG00000019960	rrs1	81	59.036	ENSSFOG00015015772	rrs1	81	58.635	Scleropages_formosus
ENSPREG00000019960	rrs1	97	66.947	ENSSMAG00000015226	rrs1	82	72.297	Scophthalmus_maximus
ENSPREG00000019960	rrs1	81	62.205	ENSSARG00000006976	RRS1	64	63.158	Sorex_araneus
ENSPREG00000019960	rrs1	100	54.821	ENSSSCG00000006214	RRS1	83	57.705	Sus_scrofa
ENSPREG00000019960	rrs1	94	65.663	ENSTRUG00000008796	rrs1	93	64.174	Takifugu_rubripes
ENSPREG00000019960	rrs1	94	68.468	ENSTNIG00000004026	rrs1	89	70.530	Tetraodon_nigroviridis
ENSPREG00000019960	rrs1	98	52.861	ENSTBEG00000014752	RRS1	83	58.033	Tupaia_belangeri
ENSPREG00000019960	rrs1	100	54.270	ENSUAMG00000008502	RRS1	83	57.705	Ursus_americanus
ENSPREG00000019960	rrs1	98	52.044	ENSVVUG00000018452	RRS1	83	57.377	Vulpes_vulpes
ENSPREG00000019960	rrs1	89	83.072	ENSXCOG00000009809	rrs1	86	82.450	Xiphophorus_couchianus