EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000020201 (Gene tree)
Gene ID: 103468559
Gene Symbol: -
Alias: -
Full Name: MKL/myocardin-like protein 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 27731 bases
Position: chrLG8:10414996-10442726
Accession: 103468559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000029849	SAP	PF02037.27	4.3e-09	1	1
ENSPREP00000029833	SAP	PF02037.27	4.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000030172	-	3221	XM_008415687	ENSPREP00000029833	1051 (aa)	XP_008413909	UPI0004A23A16
ENSPRET00000030189	-	3155	XM_017306406	ENSPREP00000029849	1029 (aa)	XP_017161895	UPI0007EC0F7C

Gene Model

Click here to download ENSPREG00000020201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000020201's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000020201	-	72	35.211	ENSPREG00000021039	mrtfab	98	32.154

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000020201	-	52	33.110	ENSG00000141052	MYOCD	59	32.562	Homo_sapiens
ENSPREG00000020201	-	60	38.574	ENSG00000196588	MRTFA	90	60.606	Homo_sapiens
ENSPREG00000020201	-	55	39.690	ENSAPOG00000014773	mrtfab	90	35.307	Acanthochromis_polyacanthus
ENSPREG00000020201	-	50	34.701	ENSAPOG00000023842	mrtfbb	54	34.286	Acanthochromis_polyacanthus
ENSPREG00000020201	-	94	41.540	ENSAPOG00000001303	-	99	41.741	Acanthochromis_polyacanthus
ENSPREG00000020201	-	53	37.500	ENSACIG00000006315	mrtfba	71	34.066	Amphilophus_citrinellus
ENSPREG00000020201	-	51	40.311	ENSACIG00000021331	mrtfab	96	34.283	Amphilophus_citrinellus
ENSPREG00000020201	-	51	40.978	ENSAPEG00000021018	mrtfab	99	33.624	Amphiprion_percula
ENSPREG00000020201	-	50	34.354	ENSATEG00000004434	mrtfbb	56	32.941	Anabas_testudineus
ENSPREG00000020201	-	95	36.670	ENSATEG00000005824	-	99	36.818	Anabas_testudineus
ENSPREG00000020201	-	50	32.353	ENSAPLG00000013526	MYOCD	54	33.793	Anas_platyrhynchos
ENSPREG00000020201	-	51	37.479	ENSACAG00000003638	MRTFB	55	37.232	Anolis_carolinensis
ENSPREG00000020201	-	59	37.205	ENSACAG00000005348	MRTFA	69	37.129	Anolis_carolinensis
ENSPREG00000020201	-	67	40.032	ENSANAG00000035209	MRTFA	72	40.850	Aotus_nancymaae
ENSPREG00000020201	-	76	37.311	ENSACLG00000018713	mrtfab	98	33.655	Astatotilapia_calliptera
ENSPREG00000020201	-	56	31.401	ENSAMXG00000017729	mrtfbb	63	30.894	Astyanax_mexicanus
ENSPREG00000020201	-	62	37.291	ENSAMXG00000007612	mrtfab	99	34.202	Astyanax_mexicanus
ENSPREG00000020201	-	51	38.103	ENSBTAG00000008728	MRTFB	54	38.396	Bos_taurus
ENSPREG00000020201	-	50	34.715	ENSBTAG00000035706	MYOCD	59	33.795	Bos_taurus
ENSPREG00000020201	-	78	40.917	ENSCJAG00000002850	MRTFA	89	40.034	Callithrix_jacchus
ENSPREG00000020201	-	50	38.115	ENSCAFG00000001154	MRTFA	90	40.103	Canis_familiaris
ENSPREG00000020201	-	50	33.506	ENSCAFG00000017863	MYOCD	57	33.793	Canis_familiaris
ENSPREG00000020201	-	67	40.872	ENSCAFG00020002129	MRTFA	90	40.103	Canis_lupus_dingo
ENSPREG00000020201	-	51	37.417	ENSCHIG00000018957	MRTFB	53	38.040	Capra_hircus
ENSPREG00000020201	-	50	34.423	ENSCHIG00000021206	MYOCD	57	33.333	Capra_hircus
ENSPREG00000020201	-	50	34.300	ENSTSYG00000014685	MYOCD	67	32.709	Carlito_syrichta
ENSPREG00000020201	-	66	40.894	ENSTSYG00000007397	MRTFA	73	40.000	Carlito_syrichta
ENSPREG00000020201	-	50	33.675	ENSCAPG00000007773	MYOCD	56	31.283	Cavia_aperea
ENSPREG00000020201	-	50	34.017	ENSCPOG00000002421	MYOCD	56	31.459	Cavia_porcellus
ENSPREG00000020201	-	67	40.359	ENSCCAG00000027355	MRTFA	72	40.527	Cebus_capucinus
ENSPREG00000020201	-	60	39.542	ENSCATG00000044298	MRTFA	78	40.099	Cercocebus_atys
ENSPREG00000020201	-	50	35.986	ENSCLAG00000009669	MYOCD	57	36.252	Chinchilla_lanigera
ENSPREG00000020201	-	60	40.065	ENSCLAG00000016828	MRTFA	84	37.681	Chinchilla_lanigera
ENSPREG00000020201	-	58	38.527	ENSCSAG00000005969	MRTFA	72	39.587	Chlorocebus_sabaeus
ENSPREG00000020201	-	51	52.866	ENSCPBG00000022902	MRTFA	65	38.689	Chrysemys_picta_bellii
ENSPREG00000020201	-	51	36.851	ENSCPBG00000006634	MRTFB	56	35.284	Chrysemys_picta_bellii
ENSPREG00000020201	-	60	39.478	ENSCANG00000035624	MRTFA	72	40.099	Colobus_angolensis_palliatus
ENSPREG00000020201	-	61	38.571	ENSCGRG00001018160	Mkl1	74	39.617	Cricetulus_griseus_chok1gshd
ENSPREG00000020201	-	51	35.332	ENSCGRG00001010790	Mkl2	53	35.227	Cricetulus_griseus_chok1gshd
ENSPREG00000020201	-	61	39.144	ENSCGRG00000016476	Mkl1	74	39.617	Cricetulus_griseus_crigri
ENSPREG00000020201	-	51	35.332	ENSCGRG00000016496	Mkl2	53	35.227	Cricetulus_griseus_crigri
ENSPREG00000020201	-	55	38.379	ENSCSEG00000020403	mrtfab	74	36.330	Cynoglossus_semilaevis
ENSPREG00000020201	-	100	53.839	ENSCVAG00000003195	-	100	54.047	Cyprinodon_variegatus
ENSPREG00000020201	-	75	35.578	ENSDARG00000075867	mrtfaa	84	39.028	Danio_rerio
ENSPREG00000020201	-	51	38.644	ENSDORG00000004843	Mkl2	52	36.824	Dipodomys_ordii
ENSPREG00000020201	-	66	38.687	ENSDORG00000000727	Mkl1	75	40.098	Dipodomys_ordii
ENSPREG00000020201	-	50	45.213	ENSEBUG00000010120	MYOCD	57	44.444	Eptatretus_burgeri
ENSPREG00000020201	-	58	40.290	ENSEASG00005002011	MRTFA	74	38.762	Equus_asinus_asinus
ENSPREG00000020201	-	60	40.887	ENSECAG00000013950	MRTFA	71	39.876	Equus_caballus
ENSPREG00000020201	-	51	37.308	ENSEEUG00000001036	MRTFB	53	37.190	Erinaceus_europaeus
ENSPREG00000020201	-	53	33.981	ENSELUG00000021530	mrtfbb	57	33.279	Esox_lucius
ENSPREG00000020201	-	68	39.863	ENSELUG00000007233	mrtfaa	85	43.684	Esox_lucius
ENSPREG00000020201	-	51	37.062	ENSFCAG00000030482	MRTFB	52	37.336	Felis_catus
ENSPREG00000020201	-	50	34.079	ENSFCAG00000011071	MYOCD	57	32.982	Felis_catus
ENSPREG00000020201	-	51	38.000	ENSFALG00000003904	MRTFB	52	36.303	Ficedula_albicollis
ENSPREG00000020201	-	79	39.706	ENSFDAG00000006435	MRTFA	73	38.250	Fukomys_damarensis
ENSPREG00000020201	-	51	34.596	ENSFHEG00000002738	mrtfbb	57	34.768	Fundulus_heteroclitus
ENSPREG00000020201	-	100	53.633	ENSFHEG00000005266	-	100	53.893	Fundulus_heteroclitus
ENSPREG00000020201	-	50	64.583	ENSGMOG00000017784	-	78	64.583	Gadus_morhua
ENSPREG00000020201	-	56	37.313	ENSGAFG00000008113	mrtfab	76	34.419	Gambusia_affinis
ENSPREG00000020201	-	96	76.800	ENSGAFG00000010084	-	100	77.268	Gambusia_affinis
ENSPREG00000020201	-	52	32.939	ENSGAFG00000017947	mrtfbb	59	33.277	Gambusia_affinis
ENSPREG00000020201	-	80	47.702	ENSGACG00000008394	-	93	46.117	Gasterosteus_aculeatus
ENSPREG00000020201	-	62	43.051	ENSGAGG00000009658	MRTFA	65	39.251	Gopherus_agassizii
ENSPREG00000020201	-	60	39.315	ENSGGOG00000015180	MKL1	72	40.000	Gorilla_gorilla
ENSPREG00000020201	-	52	32.943	ENSGGOG00000008879	MYOCD	59	32.397	Gorilla_gorilla
ENSPREG00000020201	-	77	37.449	ENSHBUG00000023207	mrtfab	98	33.815	Haplochromis_burtoni
ENSPREG00000020201	-	67	40.461	ENSHGLG00000009723	MRTFA	73	38.725	Heterocephalus_glaber_female
ENSPREG00000020201	-	67	39.737	ENSHGLG00100016746	MRTFA	73	38.010	Heterocephalus_glaber_male
ENSPREG00000020201	-	64	41.770	ENSHCOG00000009798	mrtfab	68	41.846	Hippocampus_comes
ENSPREG00000020201	-	61	37.994	ENSIPUG00000000739	mrtfab	99	33.890	Ictalurus_punctatus
ENSPREG00000020201	-	69	40.320	ENSSTOG00000002947	MRTFA	75	40.256	Ictidomys_tridecemlineatus
ENSPREG00000020201	-	54	35.703	ENSSTOG00000013006	MRTFB	52	35.774	Ictidomys_tridecemlineatus
ENSPREG00000020201	-	100	41.551	ENSKMAG00000016870	-	99	41.638	Kryptolebias_marmoratus
ENSPREG00000020201	-	55	42.444	ENSKMAG00000002014	mrtfab	99	33.981	Kryptolebias_marmoratus
ENSPREG00000020201	-	51	39.418	ENSLBEG00000002808	mrtfab	95	33.689	Labrus_bergylta
ENSPREG00000020201	-	64	35.780	ENSLACG00000005378	MRTFA	69	35.727	Latimeria_chalumnae
ENSPREG00000020201	-	51	39.182	ENSLAFG00000000366	MRTFB	52	38.671	Loxodonta_africana
ENSPREG00000020201	-	51	38.284	ENSLAFG00000030989	MRTFA	62	39.344	Loxodonta_africana
ENSPREG00000020201	-	50	33.672	ENSLAFG00000012269	MYOCD	57	33.106	Loxodonta_africana
ENSPREG00000020201	-	60	39.542	ENSMFAG00000046410	MRTFA	72	40.264	Macaca_fascicularis
ENSPREG00000020201	-	60	40.131	ENSMMUG00000020411	MRTFA	72	39.347	Macaca_mulatta
ENSPREG00000020201	-	60	40.131	ENSMNEG00000031219	MRTFA	72	40.264	Macaca_nemestrina
ENSPREG00000020201	-	60	39.706	ENSMLEG00000036191	MRTFA	72	40.099	Mandrillus_leucophaeus
ENSPREG00000020201	-	92	37.069	ENSMAMG00000005317	-	99	39.759	Mastacembelus_armatus
ENSPREG00000020201	-	89	36.218	ENSMAMG00000003242	mrtfab	99	33.597	Mastacembelus_armatus
ENSPREG00000020201	-	75	37.324	ENSMZEG00005028077	mrtfab	98	33.655	Maylandia_zebra
ENSPREG00000020201	-	50	33.101	ENSMGAG00000002098	MYOCD	57	33.162	Meleagris_gallopavo
ENSPREG00000020201	-	51	37.043	ENSMAUG00000012578	Mkl1	72	37.643	Mesocricetus_auratus
ENSPREG00000020201	-	51	34.564	ENSMAUG00000008606	Mkl2	51	34.564	Mesocricetus_auratus
ENSPREG00000020201	-	60	40.879	ENSMICG00000005671	MRTFA	73	39.680	Microcebus_murinus
ENSPREG00000020201	-	51	37.479	ENSMICG00000007900	MRTFB	61	37.833	Microcebus_murinus
ENSPREG00000020201	-	79	38.235	ENSMOCG00000021144	Mkl1	75	39.683	Microtus_ochrogaster
ENSPREG00000020201	-	61	38.425	MGP_CAROLIEiJ_G0020047	Mkl1	82	39.109	Mus_caroli
ENSPREG00000020201	-	60	40.215	ENSMUSG00000042292	Mkl1	82	38.944	Mus_musculus
ENSPREG00000020201	-	67	40.594	MGP_PahariEiJ_G0020049	Mkl1	79	39.286	Mus_pahari
ENSPREG00000020201	-	61	39.389	MGP_SPRETEiJ_G0020945	Mkl1	82	38.944	Mus_spretus
ENSPREG00000020201	-	71	46.512	ENSNBRG00000005688	-	94	45.255	Neolamprologus_brichardi
ENSPREG00000020201	-	76	37.330	ENSNBRG00000004360	mrtfab	98	33.413	Neolamprologus_brichardi
ENSPREG00000020201	-	51	39.865	ENSNLEG00000015359	MRTFA	60	40.513	Nomascus_leucogenys
ENSPREG00000020201	-	54	38.390	ENSMEUG00000001042	MRTFA	82	37.422	Notamacropus_eugenii
ENSPREG00000020201	-	50	34.790	ENSONIG00000001419	mrtfbb	55	33.566	Oreochromis_niloticus
ENSPREG00000020201	-	73	46.626	ENSONIG00000007040	-	99	38.904	Oreochromis_niloticus
ENSPREG00000020201	-	68	39.617	ENSONIG00000019711	mrtfab	78	41.054	Oreochromis_niloticus
ENSPREG00000020201	-	53	36.125	ENSOCUG00000015855	MRTFB	51	35.877	Oryctolagus_cuniculus
ENSPREG00000020201	-	100	39.368	ENSORLG00000013273	-	99	39.212	Oryzias_latipes
ENSPREG00000020201	-	64	39.308	ENSORLG00000002421	mrtfab	99	33.895	Oryzias_latipes
ENSPREG00000020201	-	100	38.993	ENSORLG00020009919	-	99	38.415	Oryzias_latipes_hni
ENSPREG00000020201	-	69	38.095	ENSORLG00020007944	mrtfab	94	32.976	Oryzias_latipes_hni
ENSPREG00000020201	-	100	38.704	ENSORLG00015020937	-	99	38.157	Oryzias_latipes_hsok
ENSPREG00000020201	-	90	38.543	ENSORLG00015006492	mrtfab	94	33.389	Oryzias_latipes_hsok
ENSPREG00000020201	-	100	40.311	ENSOMEG00000022122	-	99	40.363	Oryzias_melastigma
ENSPREG00000020201	-	58	38.705	ENSOMEG00000009541	mrtfab	94	34.746	Oryzias_melastigma
ENSPREG00000020201	-	62	38.110	ENSOGAG00000003217	MRTFA	90	38.636	Otolemur_garnettii
ENSPREG00000020201	-	55	37.579	ENSOARG00000007471	MRTFB	59	38.050	Ovis_aries
ENSPREG00000020201	-	66	38.221	ENSPPAG00000020762	MRTFA	72	39.167	Pan_paniscus
ENSPREG00000020201	-	52	33.110	ENSPPAG00000040890	MYOCD	59	32.562	Pan_paniscus
ENSPREG00000020201	-	50	37.221	ENSPPRG00000024730	MRTFB	50	37.500	Panthera_pardus
ENSPREG00000020201	-	50	34.423	ENSPPRG00000013106	MYOCD	58	34.530	Panthera_pardus
ENSPREG00000020201	-	50	37.393	ENSPTIG00000014959	MRTFB	52	37.669	Panthera_tigris_altaica
ENSPREG00000020201	-	67	38.989	ENSPTRG00000014409	MRTFA	72	40.000	Pan_troglodytes
ENSPREG00000020201	-	52	33.110	ENSPTRG00000008786	MYOCD	59	32.562	Pan_troglodytes
ENSPREG00000020201	-	60	39.542	ENSPANG00000024733	MRTFA	72	40.264	Papio_anubis
ENSPREG00000020201	-	65	40.833	ENSPKIG00000004053	mrtfab	72	40.032	Paramormyrops_kingsleyae
ENSPREG00000020201	-	57	41.387	ENSPKIG00000001046	-	77	38.125	Paramormyrops_kingsleyae
ENSPREG00000020201	-	50	36.897	ENSPSIG00000006962	MRTFB	53	35.355	Pelodiscus_sinensis
ENSPREG00000020201	-	60	43.697	ENSPMGG00000007329	mrtfab	79	43.697	Periophthalmus_magnuspinnatus
ENSPREG00000020201	-	67	37.981	ENSPEMG00000003602	Mkl1	72	38.574	Peromyscus_maniculatus_bairdii
ENSPREG00000020201	-	55	38.078	ENSPCIG00000020323	MRTFA	79	36.198	Phascolarctos_cinereus
ENSPREG00000020201	-	52	34.219	ENSPFOG00000010759	mrtfbb	59	34.291	Poecilia_formosa
ENSPREG00000020201	-	54	41.538	ENSPLAG00000001889	mrtfab	97	32.237	Poecilia_latipinna
ENSPREG00000020201	-	52	32.770	ENSPLAG00000002349	mrtfbb	59	33.953	Poecilia_latipinna
ENSPREG00000020201	-	77	91.793	ENSPMEG00000005523	-	98	91.035	Poecilia_mexicana
ENSPREG00000020201	-	52	33.052	ENSPMEG00000019033	mrtfbb	59	34.233	Poecilia_mexicana
ENSPREG00000020201	-	58	38.291	ENSPPYG00000011852	MRTFA	72	39.587	Pongo_abelii
ENSPREG00000020201	-	51	50.515	ENSPCAG00000004864	MRTFA	68	50.515	Procavia_capensis
ENSPREG00000020201	-	50	37.372	ENSPCOG00000020125	MRTFB	50	36.707	Propithecus_coquereli
ENSPREG00000020201	-	67	40.391	ENSPCOG00000018452	MRTFA	72	40.262	Propithecus_coquereli
ENSPREG00000020201	-	50	31.872	ENSPCOG00000028319	MYOCD	73	31.376	Propithecus_coquereli
ENSPREG00000020201	-	51	48.571	ENSPVAG00000014217	MRTFA	66	44.231	Pteropus_vampyrus
ENSPREG00000020201	-	60	37.379	ENSPNYG00000003895	mrtfab	92	37.780	Pundamilia_nyererei
ENSPREG00000020201	-	51	31.250	ENSPNAG00000026256	MYOCD	65	36.762	Pygocentrus_nattereri
ENSPREG00000020201	-	54	35.552	ENSPNAG00000011420	mrtfba	55	33.279	Pygocentrus_nattereri
ENSPREG00000020201	-	68	38.425	ENSRNOG00000018803	Mrtfa	75	39.715	Rattus_norvegicus
ENSPREG00000020201	-	60	39.315	ENSRBIG00000036684	MRTFA	72	39.934	Rhinopithecus_bieti
ENSPREG00000020201	-	60	39.478	ENSRROG00000042362	MRTFA	72	40.099	Rhinopithecus_roxellana
ENSPREG00000020201	-	66	40.440	ENSSBOG00000019487	MRTFA	72	39.693	Saimiri_boliviensis_boliviensis
ENSPREG00000020201	-	50	31.872	ENSSHAG00000002911	-	77	30.743	Sarcophilus_harrisii
ENSPREG00000020201	-	54	35.025	ENSSFOG00015011587	-	54	35.025	Scleropages_formosus
ENSPREG00000020201	-	74	39.368	ENSSFOG00015011195	mkl1	99	33.759	Scleropages_formosus
ENSPREG00000020201	-	69	41.051	ENSSFOG00015004553	mrtfab	69	40.378	Scleropages_formosus
ENSPREG00000020201	-	50	33.092	ENSSMAG00000002501	MYOCD	58	33.692	Scophthalmus_maximus
ENSPREG00000020201	-	50	34.896	ENSSLDG00000010820	mrtfbb	55	34.441	Seriola_lalandi_dorsalis
ENSPREG00000020201	-	58	38.128	ENSSARG00000004057	MRTFA	72	37.347	Sorex_araneus
ENSPREG00000020201	-	50	33.743	ENSSPUG00000006103	MYOCD	58	33.568	Sphenodon_punctatus
ENSPREG00000020201	-	70	37.410	ENSSPAG00000005433	mrtfab	84	40.288	Stegastes_partitus
ENSPREG00000020201	-	51	39.562	ENSSSCG00000039171	MRTFB	53	39.562	Sus_scrofa
ENSPREG00000020201	-	52	32.818	ENSTRUG00000011901	mrtfbb	63	32.323	Takifugu_rubripes
ENSPREG00000020201	-	77	36.696	ENSTNIG00000012948	mrtfab	99	35.703	Tetraodon_nigroviridis
ENSPREG00000020201	-	57	33.385	ENSTNIG00000018586	mrtfbb	65	33.077	Tetraodon_nigroviridis
ENSPREG00000020201	-	51	35.750	ENSTTRG00000006876	MRTFB	59	36.258	Tursiops_truncatus
ENSPREG00000020201	-	50	38.525	ENSVVUG00000006989	MRTFA	90	39.836	Vulpes_vulpes
ENSPREG00000020201	-	50	33.391	ENSVVUG00000029888	MYOCD	54	33.677	Vulpes_vulpes
ENSPREG00000020201	-	53	36.953	ENSXETG00000010993	mrtfb	55	36.911	Xenopus_tropicalis
ENSPREG00000020201	-	69	38.989	ENSXETG00000022963	mrtfa	65	39.444	Xenopus_tropicalis
ENSPREG00000020201	-	50	36.207	ENSXETG00000011035	myocd	55	35.852	Xenopus_tropicalis
ENSPREG00000020201	-	50	39.828	ENSXCOG00000001482	mrtfab	85	46.552	Xiphophorus_couchianus
ENSPREG00000020201	-	76	37.812	ENSXMAG00000009671	mrtfab	95	32.587	Xiphophorus_maculatus
ENSPREG00000020201	-	96	80.819	ENSXMAG00000001274	-	100	80.876	Xiphophorus_maculatus