EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000020265 (Gene tree)
Gene ID: -
Gene Symbol: zgc:110796
Alias: cb676|msi1
Full Name: zgc:110796
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 1961 bases
Position: chrLG9:7440356-7442316
Accession: ZDB-GENE-050306-36
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000029931	RRM_1	PF00076.22	4.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000030272	-	351	-	ENSPREP00000029931	116 (aa)	-	-

Gene Model

Click here to download ENSPREG00000020265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000020265's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000020265	zgc:110796	84	41.176	ENSPREG00000005411	hnrnpa3	52	41.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000020265	zgc:110796	91	68.224	ENSAPOG00000003191	MSI1	50	68.142	Acanthochromis_polyacanthus
ENSPREG00000020265	zgc:110796	81	80.851	ENSACIG00000018210	zgc:110796	100	80.851	Amphilophus_citrinellus
ENSPREG00000020265	zgc:110796	91	68.224	ENSACLG00000011230	MSI1	81	71.134	Astatotilapia_calliptera
ENSPREG00000020265	zgc:110796	91	62.857	ENSCJAG00000008578	MSI1	54	45.614	Callithrix_jacchus
ENSPREG00000020265	zgc:110796	91	62.857	ENSCSAG00000002265	MSI1	55	62.857	Chlorocebus_sabaeus
ENSPREG00000020265	zgc:110796	82	71.134	ENSCVAG00000017430	zgc:110796	69	71.134	Cyprinodon_variegatus
ENSPREG00000020265	zgc:110796	81	73.958	ENSDARG00000041299	zgc:110796	100	76.042	Danio_rerio
ENSPREG00000020265	zgc:110796	91	72.897	ENSHCOG00000012067	-	54	71.910	Hippocampus_comes
ENSPREG00000020265	zgc:110796	91	60.000	ENSJJAG00000010643	-	54	60.000	Jaculus_jaculus
ENSPREG00000020265	zgc:110796	91	74.286	ENSKMAG00000011251	MSI1	53	80.220	Kryptolebias_marmoratus
ENSPREG00000020265	zgc:110796	78	76.923	ENSLOCG00000008618	zgc:110796	57	76.923	Lepisosteus_oculatus
ENSPREG00000020265	zgc:110796	60	71.875	ENSMGAG00000016518	-	52	71.875	Meleagris_gallopavo
ENSPREG00000020265	zgc:110796	63	73.973	ENSMAUG00000016820	Msi1	53	73.973	Mesocricetus_auratus
ENSPREG00000020265	zgc:110796	81	73.958	ENSNBRG00000018002	zgc:110796	100	73.958	Neolamprologus_brichardi
ENSPREG00000020265	zgc:110796	63	71.233	ENSPSIG00000016295	-	59	71.233	Pelodiscus_sinensis
ENSPREG00000020265	zgc:110796	91	71.681	ENSSPAG00000015573	zgc:110796	57	71.681	Stegastes_partitus
ENSPREG00000020265	zgc:110796	91	76.415	ENSTRUG00000021586	-	100	76.415	Takifugu_rubripes