EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000020276 (Gene tree)
Gene ID: 103461903
Gene Symbol: RAB29
Alias: RAB7L|RAB7L1
Full Name: RAB29%2C member RAS oncogene family
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 3270 bases
Position: chrLG2:44015432-44018701
Accession: 103461903
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000029953	MMR_HSR1	PF01926.23	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000030294	RAB29-201	621	XM_008404289	ENSPREP00000029953	206 (aa)	XP_008402511	UPI0004A3D8F4

Gene Model

Click here to download ENSPREG00000020276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000020276's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000020276	RAB29	84	34.857	ENSPREG00000009597	-	80	34.857
ENSPREG00000020276	RAB29	83	37.427	ENSPREG00000013962	rab42a	77	37.427
ENSPREG00000020276	RAB29	85	33.146	ENSPREG00000022167	-	82	33.146
ENSPREG00000020276	RAB29	82	33.529	ENSPREG00000006357	rab11ba	59	33.529
ENSPREG00000020276	RAB29	76	30.435	ENSPREG00000010228	dnajc27	81	30.435
ENSPREG00000020276	RAB29	99	30.144	ENSPREG00000003616	rab1ba	98	30.144
ENSPREG00000020276	RAB29	84	36.207	ENSPREG00000006970	rab9b	79	36.207
ENSPREG00000020276	RAB29	82	34.706	ENSPREG00000009605	rab11a	76	34.706
ENSPREG00000020276	RAB29	99	31.455	ENSPREG00000017324	rab11al	95	31.455
ENSPREG00000020276	RAB29	80	30.303	ENSPREG00000006119	rab25a	83	30.935
ENSPREG00000020276	RAB29	86	33.514	ENSPREG00000010154	rab4a	82	33.514
ENSPREG00000020276	RAB29	98	32.212	ENSPREG00000019783	RAB15	96	32.212
ENSPREG00000020276	RAB29	84	34.857	ENSPREG00000007129	RAB39B	80	34.857
ENSPREG00000020276	RAB29	81	33.929	ENSPREG00000006336	-	74	33.929
ENSPREG00000020276	RAB29	53	30.000	ENSPREG00000016664	rap2b	86	31.496
ENSPREG00000020276	RAB29	94	31.472	ENSPREG00000017344	-	88	31.472
ENSPREG00000020276	RAB29	99	34.634	ENSPREG00000001832	rab9a	98	34.634
ENSPREG00000020276	RAB29	83	32.184	ENSPREG00000010920	rab22a	86	32.184
ENSPREG00000020276	RAB29	55	33.621	ENSPREG00000016102	si:ch73-116o1.2	77	30.952
ENSPREG00000020276	RAB29	80	32.927	ENSPREG00000022241	si:dkey-13a21.4	79	32.927
ENSPREG00000020276	RAB29	99	34.634	ENSPREG00000012522	-	99	34.634
ENSPREG00000020276	RAB29	82	36.471	ENSPREG00000005923	rab18a	67	36.471
ENSPREG00000020276	RAB29	78	34.161	ENSPREG00000022509	rab23	83	34.659
ENSPREG00000020276	RAB29	86	34.270	ENSPREG00000012148	RAB7A	86	34.270
ENSPREG00000020276	RAB29	60	40.000	ENSPREG00000001864	-	63	36.306
ENSPREG00000020276	RAB29	81	34.132	ENSPREG00000010146	rab5c	73	34.132
ENSPREG00000020276	RAB29	86	34.831	ENSPREG00000017750	RAB7A	86	34.831
ENSPREG00000020276	RAB29	82	34.320	ENSPREG00000017517	zgc:171927	77	34.320
ENSPREG00000020276	RAB29	82	34.706	ENSPREG00000020321	rab1ab	81	34.706
ENSPREG00000020276	RAB29	86	35.000	ENSPREG00000014634	rab30	86	35.000
ENSPREG00000020276	RAB29	88	34.021	ENSPREG00000000880	rab33ba	80	34.021
ENSPREG00000020276	RAB29	75	35.669	ENSPREG00000007017	zgc:101559	65	35.669
ENSPREG00000020276	RAB29	83	36.257	ENSPREG00000017567	rab13	83	36.257
ENSPREG00000020276	RAB29	60	32.258	ENSPREG00000021315	arl8bb	62	32.258
ENSPREG00000020276	RAB29	86	32.418	ENSPREG00000003221	rab33a	52	32.418
ENSPREG00000020276	RAB29	99	33.493	ENSPREG00000005323	si:dkey-16l2.16	97	33.493
ENSPREG00000020276	RAB29	99	32.258	ENSPREG00000014888	rab2a	98	32.258
ENSPREG00000020276	RAB29	91	32.984	ENSPREG00000014269	rab11bb	82	32.984
ENSPREG00000020276	RAB29	98	31.527	ENSPREG00000009535	RAB41	91	31.527
ENSPREG00000020276	RAB29	90	36.898	ENSPREG00000017487	rab12	77	36.041
ENSPREG00000020276	RAB29	98	35.238	ENSPREG00000010284	rab15	96	35.238
ENSPREG00000020276	RAB29	99	31.553	ENSPREG00000004889	-	94	31.553
ENSPREG00000020276	RAB29	79	31.902	ENSPREG00000014761	rabl2	76	31.902
ENSPREG00000020276	RAB29	79	33.129	ENSPREG00000015480	rab6ba	78	33.129

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000020276	RAB29	100	71.359	ENSATEG00000024739	RAB29	100	71.359	Anabas_testudineus
ENSPREG00000020276	RAB29	80	79.394	ENSACLG00000008602	RAB29	100	79.394	Astatotilapia_calliptera
ENSPREG00000020276	RAB29	100	78.155	ENSCVAG00000014038	RAB29	100	78.155	Cyprinodon_variegatus
ENSPREG00000020276	RAB29	98	49.505	ENSEBUG00000002259	RAB29	96	49.505	Eptatretus_burgeri
ENSPREG00000020276	RAB29	95	68.878	ENSFHEG00000015993	RAB29	95	68.878	Fundulus_heteroclitus
ENSPREG00000020276	RAB29	80	70.122	ENSGMOG00000018475	RAB29	99	70.122	Gadus_morhua
ENSPREG00000020276	RAB29	100	88.350	ENSGAFG00000000629	RAB29	100	88.350	Gambusia_affinis
ENSPREG00000020276	RAB29	100	66.990	ENSGACG00000010473	RAB29	99	66.990	Gasterosteus_aculeatus
ENSPREG00000020276	RAB29	100	71.981	ENSHBUG00000012594	RAB29	100	71.981	Haplochromis_burtoni
ENSPREG00000020276	RAB29	99	69.458	ENSKMAG00000017150	-	91	69.458	Kryptolebias_marmoratus
ENSPREG00000020276	RAB29	100	69.903	ENSLBEG00000018812	RAB29	100	69.903	Labrus_bergylta
ENSPREG00000020276	RAB29	100	69.903	ENSLBEG00000006152	-	100	69.903	Labrus_bergylta
ENSPREG00000020276	RAB29	99	52.941	ENSLACG00000002523	RAB29	98	52.941	Latimeria_chalumnae
ENSPREG00000020276	RAB29	100	70.874	ENSMAMG00000006963	RAB29	100	70.874	Mastacembelus_armatus
ENSPREG00000020276	RAB29	100	71.014	ENSMZEG00005026799	RAB29	100	71.014	Maylandia_zebra
ENSPREG00000020276	RAB29	99	71.569	ENSMALG00000018436	RAB29	89	71.569	Monopterus_albus
ENSPREG00000020276	RAB29	92	71.053	ENSNBRG00000008714	RAB29	79	71.053	Neolamprologus_brichardi
ENSPREG00000020276	RAB29	100	71.498	ENSONIG00000014892	RAB29	100	71.498	Oreochromis_niloticus
ENSPREG00000020276	RAB29	100	68.932	ENSORLG00000027892	RAB29	100	68.932	Oryzias_latipes
ENSPREG00000020276	RAB29	100	67.476	ENSORLG00020005240	RAB29	100	67.476	Oryzias_latipes_hni
ENSPREG00000020276	RAB29	100	67.961	ENSORLG00015020441	-	100	67.961	Oryzias_latipes_hsok
ENSPREG00000020276	RAB29	100	68.932	ENSOMEG00000000336	RAB29	100	68.932	Oryzias_melastigma
ENSPREG00000020276	RAB29	100	66.505	ENSPMGG00000008290	-	100	66.505	Periophthalmus_magnuspinnatus
ENSPREG00000020276	RAB29	100	89.320	ENSPFOG00000013066	RAB29	99	89.320	Poecilia_formosa
ENSPREG00000020276	RAB29	100	87.864	ENSPLAG00000002600	RAB29	97	87.864	Poecilia_latipinna
ENSPREG00000020276	RAB29	100	89.806	ENSPMEG00000021807	RAB29	100	89.806	Poecilia_mexicana
ENSPREG00000020276	RAB29	100	71.014	ENSPNYG00000015355	RAB29	100	71.014	Pundamilia_nyererei
ENSPREG00000020276	RAB29	100	69.082	ENSSDUG00000006543	RAB29	100	69.082	Seriola_dumerili
ENSPREG00000020276	RAB29	86	55.932	ENSSPUG00000015007	RAB29	87	55.932	Sphenodon_punctatus
ENSPREG00000020276	RAB29	100	71.845	ENSSPAG00000002062	RAB29	100	71.845	Stegastes_partitus
ENSPREG00000020276	RAB29	100	85.437	ENSXCOG00000016370	RAB29	100	85.437	Xiphophorus_couchianus
ENSPREG00000020276	RAB29	100	86.408	ENSXMAG00000029823	RAB29	100	86.408	Xiphophorus_maculatus