EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000020328 (Gene tree)
Gene ID: 103464206
Gene Symbol: zgc:171480
Alias: -
Full Name: mitochondrial ribosomal protein L55
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 6440 bases
Position: chrLG4:31004239-31010678
Accession: 103464206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000030014	Mitoc_L55	PF09776.9	1.1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000030356	-	2702	XM_008408157	ENSPREP00000030014	140 (aa)	XP_008406379	UPI0004A2B14F

Gene Model

Click here to download ENSPREG00000020328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000020328's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000020328	zgc:171480	88	61.538	ENSAPOG00000002881	zgc:171480	90	61.538	Acanthochromis_polyacanthus
ENSPREG00000020328	zgc:171480	95	62.406	ENSACIG00000001646	zgc:171480	94	62.406	Amphilophus_citrinellus
ENSPREG00000020328	zgc:171480	89	62.121	ENSAOCG00000016155	zgc:171480	92	62.121	Amphiprion_ocellaris
ENSPREG00000020328	zgc:171480	89	62.121	ENSAPEG00000022327	zgc:171480	92	62.121	Amphiprion_percula
ENSPREG00000020328	zgc:171480	99	55.479	ENSATEG00000005625	zgc:171480	99	55.479	Anabas_testudineus
ENSPREG00000020328	zgc:171480	71	55.446	ENSACAG00000006897	-	80	54.455	Anolis_carolinensis
ENSPREG00000020328	zgc:171480	91	61.417	ENSACLG00000005172	zgc:171480	88	61.417	Astatotilapia_calliptera
ENSPREG00000020328	zgc:171480	86	56.667	ENSAMXG00000043839	zgc:171480	90	56.667	Astyanax_mexicanus
ENSPREG00000020328	zgc:171480	71	55.000	ENSCPBG00000001771	-	80	55.000	Chrysemys_picta_bellii
ENSPREG00000020328	zgc:171480	99	49.640	ENSCSEG00000019533	zgc:171480	99	49.640	Cynoglossus_semilaevis
ENSPREG00000020328	zgc:171480	74	63.107	ENSDARG00000043402	zgc:171480	77	63.107	Danio_rerio
ENSPREG00000020328	zgc:171480	99	48.936	ENSELUG00000007716	zgc:171480	100	48.936	Esox_lucius
ENSPREG00000020328	zgc:171480	65	47.253	ENSFALG00000001083	-	94	47.253	Ficedula_albicollis
ENSPREG00000020328	zgc:171480	76	88.679	ENSFHEG00000000203	zgc:171480	94	77.692	Fundulus_heteroclitus
ENSPREG00000020328	zgc:171480	73	67.647	ENSGMOG00000019009	zgc:171480	100	67.647	Gadus_morhua
ENSPREG00000020328	zgc:171480	81	40.351	ENSGALG00000038820	-	100	41.228	Gallus_gallus
ENSPREG00000020328	zgc:171480	93	90.000	ENSGAFG00000004832	-	90	90.000	Gambusia_affinis
ENSPREG00000020328	zgc:171480	66	79.348	ENSGACG00000002136	zgc:171480	100	79.348	Gasterosteus_aculeatus
ENSPREG00000020328	zgc:171480	71	53.000	ENSGAGG00000001806	-	81	53.000	Gopherus_agassizii
ENSPREG00000020328	zgc:171480	91	61.417	ENSHBUG00000007895	zgc:171480	88	61.417	Haplochromis_burtoni
ENSPREG00000020328	zgc:171480	81	66.957	ENSHCOG00000003526	zgc:171480	63	66.957	Hippocampus_comes
ENSPREG00000020328	zgc:171480	94	49.624	ENSIPUG00000001273	mrpl55	96	49.624	Ictalurus_punctatus
ENSPREG00000020328	zgc:171480	74	71.845	ENSKMAG00000002011	zgc:171480	81	71.845	Kryptolebias_marmoratus
ENSPREG00000020328	zgc:171480	74	75.000	ENSLBEG00000016107	-	83	75.000	Labrus_bergylta
ENSPREG00000020328	zgc:171480	74	75.000	ENSLBEG00000010915	zgc:171480	83	75.000	Labrus_bergylta
ENSPREG00000020328	zgc:171480	92	51.538	ENSLACG00000016281	zgc:171480	97	51.538	Latimeria_chalumnae
ENSPREG00000020328	zgc:171480	100	57.143	ENSMAMG00000022250	zgc:171480	100	57.143	Mastacembelus_armatus
ENSPREG00000020328	zgc:171480	91	61.417	ENSMZEG00005015585	zgc:171480	88	61.417	Maylandia_zebra
ENSPREG00000020328	zgc:171480	71	44.444	ENSMGAG00000002612	-	87	44.444	Meleagris_gallopavo
ENSPREG00000020328	zgc:171480	86	48.333	ENSMMOG00000008740	-	90	48.333	Mola_mola
ENSPREG00000020328	zgc:171480	75	61.905	ENSMALG00000019823	zgc:171480	83	61.905	Monopterus_albus
ENSPREG00000020328	zgc:171480	91	60.630	ENSNBRG00000019447	zgc:171480	88	60.630	Neolamprologus_brichardi
ENSPREG00000020328	zgc:171480	91	60.630	ENSONIG00000007645	zgc:171480	90	60.630	Oreochromis_niloticus
ENSPREG00000020328	zgc:171480	81	64.035	ENSORLG00020006963	zgc:171480	84	64.035	Oryzias_latipes_hni
ENSPREG00000020328	zgc:171480	84	61.864	ENSORLG00015003266	zgc:171480	86	61.739	Oryzias_latipes_hsok
ENSPREG00000020328	zgc:171480	85	63.866	ENSOMEG00000008184	zgc:171480	86	63.866	Oryzias_melastigma
ENSPREG00000020328	zgc:171480	70	59.596	ENSPKIG00000006753	zgc:171480	77	59.596	Paramormyrops_kingsleyae
ENSPREG00000020328	zgc:171480	74	53.398	ENSPSIG00000010893	-	82	53.398	Pelodiscus_sinensis
ENSPREG00000020328	zgc:171480	86	60.331	ENSPMGG00000012657	-	88	60.331	Periophthalmus_magnuspinnatus
ENSPREG00000020328	zgc:171480	66	46.316	ENSPMAG00000000867	zgc:171480	100	41.880	Petromyzon_marinus
ENSPREG00000020328	zgc:171480	77	49.123	ENSPCIG00000021848	-	87	49.123	Phascolarctos_cinereus
ENSPREG00000020328	zgc:171480	100	97.857	ENSPFOG00000012703	zgc:171480	100	97.857	Poecilia_formosa
ENSPREG00000020328	zgc:171480	86	57.025	ENSPNAG00000017309	zgc:171480	90	57.025	Pygocentrus_nattereri
ENSPREG00000020328	zgc:171480	76	60.748	ENSSFOG00015015668	mrpl55	80	60.748	Scleropages_formosus
ENSPREG00000020328	zgc:171480	84	64.407	ENSSMAG00000005429	zgc:171480	84	64.407	Scophthalmus_maximus
ENSPREG00000020328	zgc:171480	99	58.865	ENSSDUG00000022556	zgc:171480	96	58.865	Seriola_dumerili
ENSPREG00000020328	zgc:171480	99	58.156	ENSSLDG00000019598	zgc:171480	96	58.156	Seriola_lalandi_dorsalis
ENSPREG00000020328	zgc:171480	71	50.000	ENSSPUG00000000735	-	80	50.000	Sphenodon_punctatus
ENSPREG00000020328	zgc:171480	89	66.667	ENSSPAG00000011598	zgc:171480	91	66.667	Stegastes_partitus
ENSPREG00000020328	zgc:171480	82	61.739	ENSTRUG00000003082	zgc:171480	81	61.739	Takifugu_rubripes
ENSPREG00000020328	zgc:171480	85	80.672	ENSXCOG00000005887	zgc:171480	95	80.672	Xiphophorus_couchianus
ENSPREG00000020328	zgc:171480	100	92.143	ENSXMAG00000007937	zgc:171480	100	92.143	Xiphophorus_maculatus