EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000020585 (Gene tree)
Gene ID: 103461885
Gene Symbol: -
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 18782 bases
Position: chrLG2:44879375-44898156
Accession: 103461885
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000030417	KH_1	PF00013.29	9.5e-51	1	3
ENSPREP00000030417	KH_1	PF00013.29	9.5e-51	2	3
ENSPREP00000030417	KH_1	PF00013.29	9.5e-51	3	3
ENSPREP00000030404	KH_1	PF00013.29	3.7e-36	1	2
ENSPREP00000030404	KH_1	PF00013.29	3.7e-36	2	2
ENSPREP00000030417	KH_2	PF07650.17	8e-12	1	1
ENSPREP00000030404	KH_2	PF07650.17	2.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000030748	-	863	-	ENSPREP00000030404	223 (aa)	-	-
ENSPRET00000030762	-	942	XM_008404252	ENSPREP00000030417	313 (aa)	XP_008402474	-

Gene Model

Click here to download ENSPREG00000020585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000020585's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000020585	-	90	30.328	ENSPREG00000007009	igf2bp1	60	30.657
ENSPREG00000020585	-	68	37.333	ENSPREG00000017911	fubp1	51	37.500
ENSPREG00000020585	-	96	94.737	ENSPREG00000015736	pcbp3	99	94.737
ENSPREG00000020585	-	74	52.857	ENSPREG00000018996	hnrnpk	52	52.857
ENSPREG00000020585	-	95	81.991	ENSPREG00000007742	PCBP2	98	75.625
ENSPREG00000020585	-	90	39.437	ENSPREG00000018946	-	51	39.437
ENSPREG00000020585	-	89	39.062	ENSPREG00000015101	FUBP3	70	39.062
ENSPREG00000020585	-	94	55.172	ENSPREG00000017370	-	71	55.172
ENSPREG00000020585	-	93	35.461	ENSPREG00000009440	igf2bp2b	62	35.461
ENSPREG00000020585	-	67	38.095	ENSPREG00000000419	khsrp	59	38.095
ENSPREG00000020585	-	96	33.858	ENSPREG00000001808	igf2bp3	60	33.858
ENSPREG00000020585	-	74	52.857	ENSPREG00000002843	hnrpkl	54	52.857
ENSPREG00000020585	-	94	75.349	ENSPREG00000001797	zgc:110045	94	76.056
ENSPREG00000020585	-	73	35.417	ENSPREG00000003168	-	65	35.417
ENSPREG00000020585	-	95	82.464	ENSPREG00000006202	pcbp2	93	83.077
ENSPREG00000020585	-	82	62.937	ENSPREG00000021498	-	72	62.937
ENSPREG00000020585	-	90	40.845	ENSPREG00000011614	nova1	53	40.845

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000020585	-	99	95.161	ENSAPOG00000020003	pcbp3	89	95.161	Acanthochromis_polyacanthus
ENSPREG00000020585	-	100	95.679	ENSAPOG00000016582	-	100	95.679	Acanthochromis_polyacanthus
ENSPREG00000020585	-	91	98.020	ENSAMEG00000001697	-	99	85.345	Ailuropoda_melanoleuca
ENSPREG00000020585	-	97	89.024	ENSACIG00000010933	pcbp3	99	85.161	Amphilophus_citrinellus
ENSPREG00000020585	-	100	95.077	ENSACIG00000002739	-	100	95.077	Amphilophus_citrinellus
ENSPREG00000020585	-	96	95.794	ENSAOCG00000008592	-	98	94.516	Amphiprion_ocellaris
ENSPREG00000020585	-	88	98.830	ENSAOCG00000007806	-	100	94.881	Amphiprion_ocellaris
ENSPREG00000020585	-	97	87.202	ENSAPEG00000008011	pcbp3	95	87.202	Amphiprion_percula
ENSPREG00000020585	-	100	97.179	ENSAPEG00000005209	-	100	97.179	Amphiprion_percula
ENSPREG00000020585	-	96	90.154	ENSATEG00000015787	-	100	90.154	Anabas_testudineus
ENSPREG00000020585	-	100	98.101	ENSATEG00000009833	-	100	98.101	Anabas_testudineus
ENSPREG00000020585	-	91	82.819	ENSAPLG00000008951	-	79	75.568	Anas_platyrhynchos
ENSPREG00000020585	-	98	90.854	ENSAPLG00000002975	-	98	90.854	Anas_platyrhynchos
ENSPREG00000020585	-	98	83.754	ENSACAG00000004607	-	99	83.754	Anolis_carolinensis
ENSPREG00000020585	-	99	81.287	ENSACAG00000009819	-	99	81.287	Anolis_carolinensis
ENSPREG00000020585	-	87	97.619	ENSANAG00000030702	-	100	97.059	Aotus_nancymaae
ENSPREG00000020585	-	100	98.403	ENSACLG00000003801	-	100	98.403	Astatotilapia_calliptera
ENSPREG00000020585	-	97	86.905	ENSACLG00000011835	pcbp3	95	86.905	Astatotilapia_calliptera
ENSPREG00000020585	-	95	69.876	ENSAMXG00000001760	zgc:110045	72	69.876	Astyanax_mexicanus
ENSPREG00000020585	-	96	94.702	ENSAMXG00000013588	-	100	94.702	Astyanax_mexicanus
ENSPREG00000020585	-	97	88.922	ENSAMXG00000003440	pcbp3	95	88.922	Astyanax_mexicanus
ENSPREG00000020585	-	91	98.020	ENSCAFG00020019472	-	81	93.886	Canis_lupus_dingo
ENSPREG00000020585	-	98	94.904	ENSCSAG00000007440	-	89	94.904	Chlorocebus_sabaeus
ENSPREG00000020585	-	87	91.192	ENSCPBG00000000733	-	66	91.192	Chrysemys_picta_bellii
ENSPREG00000020585	-	95	95.395	ENSCPBG00000012151	-	99	89.521	Chrysemys_picta_bellii
ENSPREG00000020585	-	96	95.695	ENSCSEG00000000822	pcbp3	99	95.695	Cynoglossus_semilaevis
ENSPREG00000020585	-	94	90.431	ENSCSEG00000016984	-	100	80.531	Cynoglossus_semilaevis
ENSPREG00000020585	-	97	86.905	ENSCVAG00000014482	pcbp3	95	86.905	Cyprinodon_variegatus
ENSPREG00000020585	-	100	96.865	ENSCVAG00000005262	-	100	96.865	Cyprinodon_variegatus
ENSPREG00000020585	-	100	89.535	ENSDARG00000054378	pcbp3	100	89.535	Danio_rerio
ENSPREG00000020585	-	98	83.439	ENSETEG00000015988	-	98	83.439	Echinops_telfairi
ENSPREG00000020585	-	92	74.272	ENSEBUG00000005495	pcbp3	74	67.611	Eptatretus_burgeri
ENSPREG00000020585	-	91	85.024	ENSEBUG00000007485	-	92	80.909	Eptatretus_burgeri
ENSPREG00000020585	-	89	73.929	ENSEBUG00000016192	pcbp3	99	73.978	Eptatretus_burgeri
ENSPREG00000020585	-	98	90.645	ENSELUG00000003521	pcbp3	98	90.645	Esox_lucius
ENSPREG00000020585	-	97	95.177	ENSELUG00000001560	-	99	85.920	Esox_lucius
ENSPREG00000020585	-	98	94.268	ENSFALG00000003949	-	98	94.268	Ficedula_albicollis
ENSPREG00000020585	-	91	83.260	ENSFALG00000004411	-	74	75.852	Ficedula_albicollis
ENSPREG00000020585	-	97	96.393	ENSFHEG00000016615	pcbp3	96	96.393	Fundulus_heteroclitus
ENSPREG00000020585	-	100	97.179	ENSFHEG00000006539	-	100	97.179	Fundulus_heteroclitus
ENSPREG00000020585	-	95	70.821	ENSGMOG00000008611	-	99	70.821	Gadus_morhua
ENSPREG00000020585	-	95	85.308	ENSGMOG00000011992	pcbp3	97	78.209	Gadus_morhua
ENSPREG00000020585	-	97	82.515	ENSGALG00000013155	-	99	82.515	Gallus_gallus
ENSPREG00000020585	-	91	92.737	ENSGALG00000004394	-	96	92.737	Gallus_gallus
ENSPREG00000020585	-	94	99.522	ENSGAFG00000010274	-	95	96.463	Gambusia_affinis
ENSPREG00000020585	-	98	86.567	ENSGAFG00000011430	pcbp3	97	86.567	Gambusia_affinis
ENSPREG00000020585	-	94	98.565	ENSGACG00000002266	-	100	89.181	Gasterosteus_aculeatus
ENSPREG00000020585	-	95	82.479	ENSGACG00000014955	-	100	77.198	Gasterosteus_aculeatus
ENSPREG00000020585	-	88	90.058	ENSGAGG00000000271	-	100	89.513	Gopherus_agassizii
ENSPREG00000020585	-	96	78.222	ENSGAGG00000006956	-	91	78.222	Gopherus_agassizii
ENSPREG00000020585	-	96	93.871	ENSHBUG00000010697	pcbp3	98	93.871	Haplochromis_burtoni
ENSPREG00000020585	-	100	98.403	ENSHBUG00000021782	-	100	98.403	Haplochromis_burtoni
ENSPREG00000020585	-	97	87.164	ENSHCOG00000017868	pcbp3	95	87.164	Hippocampus_comes
ENSPREG00000020585	-	100	90.654	ENSHCOG00000006067	-	93	97.949	Hippocampus_comes
ENSPREG00000020585	-	100	97.764	ENSIPUG00000006238	pcbp3	100	97.764	Ictalurus_punctatus
ENSPREG00000020585	-	97	87.202	ENSKMAG00000003046	pcbp3	95	87.202	Kryptolebias_marmoratus
ENSPREG00000020585	-	97	95.177	ENSKMAG00000018530	-	95	95.177	Kryptolebias_marmoratus
ENSPREG00000020585	-	99	94.249	ENSLBEG00000006201	pcbp3	98	94.249	Labrus_bergylta
ENSPREG00000020585	-	100	82.972	ENSLBEG00000006542	-	100	82.972	Labrus_bergylta
ENSPREG00000020585	-	91	87.556	ENSLACG00000010386	pcbp3	74	81.714	Latimeria_chalumnae
ENSPREG00000020585	-	94	81.034	ENSLACG00000010804	zgc:110045	74	75.424	Latimeria_chalumnae
ENSPREG00000020585	-	91	98.515	ENSLOCG00000009369	pcbp3	99	89.521	Lepisosteus_oculatus
ENSPREG00000020585	-	95	80.734	ENSLOCG00000005058	zgc:110045	80	80.734	Lepisosteus_oculatus
ENSPREG00000020585	-	96	96.689	ENSMAMG00000022336	pcbp3	93	96.689	Mastacembelus_armatus
ENSPREG00000020585	-	100	96.835	ENSMAMG00000011620	-	100	96.835	Mastacembelus_armatus
ENSPREG00000020585	-	97	87.425	ENSMZEG00005008993	pcbp3	94	92.308	Maylandia_zebra
ENSPREG00000020585	-	97	90.446	ENSMZEG00005014882	-	100	86.550	Maylandia_zebra
ENSPREG00000020585	-	91	83.260	ENSMGAG00000006794	-	75	75.350	Meleagris_gallopavo
ENSPREG00000020585	-	94	79.130	ENSMGAG00000001883	-	95	79.420	Meleagris_gallopavo
ENSPREG00000020585	-	100	98.083	ENSMMOG00000005216	-	100	98.083	Mola_mola
ENSPREG00000020585	-	96	91.987	ENSMMOG00000000730	pcbp3	88	91.987	Mola_mola
ENSPREG00000020585	-	73	78.037	ENSMODG00000027884	-	93	78.037	Monodelphis_domestica
ENSPREG00000020585	-	96	89.846	ENSMALG00000000691	pcbp3	93	94.737	Monopterus_albus
ENSPREG00000020585	-	98	85.886	ENSMPUG00000001779	-	90	85.886	Mustela_putorius_furo
ENSPREG00000020585	-	98	90.093	ENSNBRG00000016714	-	99	90.093	Neolamprologus_brichardi
ENSPREG00000020585	-	97	89.264	ENSNBRG00000016409	-	95	89.264	Neolamprologus_brichardi
ENSPREG00000020585	-	95	83.430	ENSOPRG00000003431	-	99	83.430	Ochotona_princeps
ENSPREG00000020585	-	100	95.950	ENSONIG00000004611	-	100	95.950	Oreochromis_niloticus
ENSPREG00000020585	-	95	86.752	ENSONIG00000012122	-	98	82.436	Oreochromis_niloticus
ENSPREG00000020585	-	98	94.268	ENSOCUG00000002696	-	89	94.268	Oryctolagus_cuniculus
ENSPREG00000020585	-	100	96.262	ENSORLG00000022739	-	100	96.262	Oryzias_latipes
ENSPREG00000020585	-	96	95.794	ENSORLG00000000059	pcbp3	100	94.516	Oryzias_latipes
ENSPREG00000020585	-	99	93.103	ENSORLG00020012671	pcbp3	99	93.103	Oryzias_latipes_hni
ENSPREG00000020585	-	100	98.403	ENSORLG00020006124	-	100	98.403	Oryzias_latipes_hni
ENSPREG00000020585	-	99	93.103	ENSORLG00015000429	pcbp3	99	93.103	Oryzias_latipes_hsok
ENSPREG00000020585	-	99	94.375	ENSORLG00015008051	-	98	94.375	Oryzias_latipes_hsok
ENSPREG00000020585	-	100	98.722	ENSOMEG00000020162	-	100	98.722	Oryzias_melastigma
ENSPREG00000020585	-	92	95.819	ENSOMEG00000020811	pcbp3	98	95.819	Oryzias_melastigma
ENSPREG00000020585	-	98	81.944	ENSOGAG00000008044	-	99	81.944	Otolemur_garnettii
ENSPREG00000020585	-	100	97.143	ENSPKIG00000019329	pcbp3	100	97.143	Paramormyrops_kingsleyae
ENSPREG00000020585	-	85	84.211	ENSPKIG00000020913	-	82	87.912	Paramormyrops_kingsleyae
ENSPREG00000020585	-	83	76.712	ENSPSIG00000008350	-	68	81.301	Pelodiscus_sinensis
ENSPREG00000020585	-	99	80.952	ENSPSIG00000014970	-	99	81.548	Pelodiscus_sinensis
ENSPREG00000020585	-	96	87.651	ENSPMGG00000022383	pcbp3	95	87.651	Periophthalmus_magnuspinnatus
ENSPREG00000020585	-	84	88.830	ENSPMAG00000004637	-	97	88.830	Petromyzon_marinus
ENSPREG00000020585	-	97	71.698	ENSPMAG00000004551	pcbp3	91	71.698	Petromyzon_marinus
ENSPREG00000020585	-	95	94.340	ENSPCIG00000028092	-	94	94.340	Phascolarctos_cinereus
ENSPREG00000020585	-	100	81.180	ENSPLAG00000011449	pcbp3	91	81.180	Poecilia_latipinna
ENSPREG00000020585	-	99	95.342	ENSPLAG00000004074	-	92	95.342	Poecilia_latipinna
ENSPREG00000020585	-	98	86.527	ENSPMEG00000021239	pcbp3	95	86.905	Poecilia_mexicana
ENSPREG00000020585	-	99	91.667	ENSPMEG00000006653	-	99	91.667	Poecilia_mexicana
ENSPREG00000020585	-	100	98.403	ENSPNYG00000013205	-	100	98.403	Pundamilia_nyererei
ENSPREG00000020585	-	96	94.194	ENSPNYG00000012326	pcbp3	95	94.194	Pundamilia_nyererei
ENSPREG00000020585	-	100	95.639	ENSPNAG00000015104	pcbp3	100	95.639	Pygocentrus_nattereri
ENSPREG00000020585	-	96	95.333	ENSPNAG00000008541	-	98	95.333	Pygocentrus_nattereri
ENSPREG00000020585	-	98	94.904	ENSRNOG00000001245	Pcbp3	98	94.904	Rattus_norvegicus
ENSPREG00000020585	-	98	85.276	ENSRBIG00000028177	-	90	85.276	Rhinopithecus_bieti
ENSPREG00000020585	-	91	96.569	ENSSHAG00000007890	-	99	88.922	Sarcophilus_harrisii
ENSPREG00000020585	-	97	83.654	ENSSFOG00015007118	-	95	83.654	Scleropages_formosus
ENSPREG00000020585	-	97	87.126	ENSSFOG00015014706	pcbp3	95	87.126	Scleropages_formosus
ENSPREG00000020585	-	97	95.498	ENSSFOG00015010205	pcbp3	95	95.498	Scleropages_formosus
ENSPREG00000020585	-	96	97.020	ENSSMAG00000011929	pcbp3	97	97.020	Scophthalmus_maximus
ENSPREG00000020585	-	100	96.541	ENSSMAG00000003135	-	100	96.541	Scophthalmus_maximus
ENSPREG00000020585	-	96	89.297	ENSSDUG00000011608	pcbp3	99	89.297	Seriola_dumerili
ENSPREG00000020585	-	97	92.605	ENSSDUG00000008502	-	95	92.605	Seriola_dumerili
ENSPREG00000020585	-	96	89.297	ENSSLDG00000008518	pcbp3	99	89.297	Seriola_lalandi_dorsalis
ENSPREG00000020585	-	97	96.463	ENSSLDG00000020161	-	95	96.463	Seriola_lalandi_dorsalis
ENSPREG00000020585	-	90	84.080	ENSSPUG00000013214	-	90	84.772	Sphenodon_punctatus
ENSPREG00000020585	-	97	77.039	ENSSPAG00000023341	-	95	77.039	Stegastes_partitus
ENSPREG00000020585	-	88	98.830	ENSSPAG00000004190	-	100	95.222	Stegastes_partitus
ENSPREG00000020585	-	98	86.826	ENSTGUG00000003316	-	99	86.826	Taeniopygia_guttata
ENSPREG00000020585	-	98	87.580	ENSTGUG00000008158	-	99	87.580	Taeniopygia_guttata
ENSPREG00000020585	-	97	91.022	ENSTRUG00000013604	pcbp3	95	91.022	Takifugu_rubripes
ENSPREG00000020585	-	99	92.652	ENSTRUG00000006280	-	99	92.652	Takifugu_rubripes
ENSPREG00000020585	-	98	82.353	ENSTTRG00000015075	-	99	82.353	Tursiops_truncatus
ENSPREG00000020585	-	91	96.535	ENSXETG00000011483	pcbp1	99	87.425	Xenopus_tropicalis
ENSPREG00000020585	-	93	78.667	ENSXETG00000010491	pcbp2	72	76.220	Xenopus_tropicalis
ENSPREG00000020585	-	96	86.905	ENSXCOG00000020481	pcbp3	95	86.905	Xiphophorus_couchianus
ENSPREG00000020585	-	97	87.202	ENSXMAG00000008175	pcbp3	95	87.202	Xiphophorus_maculatus
ENSPREG00000020585	-	97	96.785	ENSXMAG00000028711	-	100	92.836	Xiphophorus_maculatus