EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000020774 (Gene tree)
Gene ID: 103464221
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 57829 bases
Position: chrLG4:31439351-31497179
Accession: 103464221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000030676	Surp	PF01805.20	7e-17	1	1
ENSPREP00000030676	G-patch	PF01585.23	2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000031026	-	5118	XM_008408186	ENSPREP00000030676	903 (aa)	XP_008406408	-

Gene Model

Click here to download ENSPREG00000020774's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000020774's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000020774	cherp	99	64.225	ENSG00000085872	CHERP	99	64.957	Homo_sapiens
ENSPREG00000020774	cherp	61	86.909	ENSAPOG00000009646	cherp	97	86.909	Acanthochromis_polyacanthus
ENSPREG00000020774	cherp	78	67.075	ENSAMEG00000010048	CHERP	99	67.065	Ailuropoda_melanoleuca
ENSPREG00000020774	cherp	99	84.573	ENSAOCG00000017846	cherp	99	85.461	Amphiprion_ocellaris
ENSPREG00000020774	cherp	99	85.333	ENSAPEG00000021128	cherp	99	85.556	Amphiprion_percula
ENSPREG00000020774	cherp	99	87.791	ENSATEG00000006341	cherp	99	87.014	Anabas_testudineus
ENSPREG00000020774	cherp	76	65.145	ENSAPLG00000010773	CHERP	99	62.801	Anas_platyrhynchos
ENSPREG00000020774	cherp	99	63.589	ENSANAG00000024284	CHERP	99	64.414	Aotus_nancymaae
ENSPREG00000020774	cherp	99	85.920	ENSACLG00000020053	cherp	99	86.031	Astatotilapia_calliptera
ENSPREG00000020774	cherp	99	70.506	ENSAMXG00000021637	cherp	93	72.000	Astyanax_mexicanus
ENSPREG00000020774	cherp	99	64.056	ENSBTAG00000005289	CHERP	99	65.096	Bos_taurus
ENSPREG00000020774	cherp	99	63.589	ENSCJAG00000040462	CHERP	99	64.414	Callithrix_jacchus
ENSPREG00000020774	cherp	99	65.348	ENSCAFG00000015671	CHERP	99	65.310	Canis_familiaris
ENSPREG00000020774	cherp	99	64.475	ENSCAFG00020009941	CHERP	99	64.550	Canis_lupus_dingo
ENSPREG00000020774	cherp	87	85.106	ENSCHIG00000013765	CHERP	96	85.106	Capra_hircus
ENSPREG00000020774	cherp	88	62.898	ENSCAPG00000000910	CHERP	71	64.714	Cavia_aperea
ENSPREG00000020774	cherp	99	64.324	ENSCPOG00000019949	CHERP	99	63.945	Cavia_porcellus
ENSPREG00000020774	cherp	99	63.484	ENSCCAG00000031534	CHERP	99	64.308	Cebus_capucinus
ENSPREG00000020774	cherp	99	63.417	ENSCATG00000031409	CHERP	99	64.662	Cercocebus_atys
ENSPREG00000020774	cherp	88	63.412	ENSCLAG00000005484	CHERP	96	63.479	Chinchilla_lanigera
ENSPREG00000020774	cherp	99	65.236	ENSCSAG00000005740	CHERP	99	65.064	Chlorocebus_sabaeus
ENSPREG00000020774	cherp	99	66.380	ENSCPBG00000014970	CHERP	99	65.517	Chrysemys_picta_bellii
ENSPREG00000020774	cherp	67	48.944	ENSCING00000004814	-	54	74.468	Ciona_intestinalis
ENSPREG00000020774	cherp	99	64.513	ENSCANG00000032053	CHERP	99	65.064	Colobus_angolensis_palliatus
ENSPREG00000020774	cherp	99	62.878	ENSCGRG00001023316	Cherp	99	64.038	Cricetulus_griseus_chok1gshd
ENSPREG00000020774	cherp	98	64.700	ENSCGRG00000015901	Cherp	99	64.775	Cricetulus_griseus_crigri
ENSPREG00000020774	cherp	98	83.019	ENSCSEG00000019700	cherp	99	82.838	Cynoglossus_semilaevis
ENSPREG00000020774	cherp	76	89.474	ENSCVAG00000003622	cherp	93	89.474	Cyprinodon_variegatus
ENSPREG00000020774	cherp	99	71.175	ENSDARG00000021812	cherp	100	82.171	Danio_rerio
ENSPREG00000020774	cherp	98	64.224	ENSDORG00000027623	Cherp	100	65.297	Dipodomys_ordii
ENSPREG00000020774	cherp	63	64.062	FBgn0261872	scaf6	94	36.441	Drosophila_melanogaster
ENSPREG00000020774	cherp	84	74.336	ENSETEG00000019543	CHERP	83	74.236	Echinops_telfairi
ENSPREG00000020774	cherp	99	65.236	ENSEASG00005000428	CHERP	91	65.389	Equus_asinus_asinus
ENSPREG00000020774	cherp	99	65.451	ENSECAG00000012713	CHERP	99	64.963	Equus_caballus
ENSPREG00000020774	cherp	99	73.355	ENSELUG00000023026	cherp	98	72.717	Esox_lucius
ENSPREG00000020774	cherp	99	64.339	ENSFCAG00000013172	CHERP	99	64.339	Felis_catus
ENSPREG00000020774	cherp	79	66.622	ENSFALG00000013410	CHERP	86	64.447	Ficedula_albicollis
ENSPREG00000020774	cherp	78	59.600	ENSFDAG00000015981	CHERP	100	57.923	Fukomys_damarensis
ENSPREG00000020774	cherp	98	78.090	ENSFHEG00000009720	cherp	79	82.411	Fundulus_heteroclitus
ENSPREG00000020774	cherp	98	77.827	ENSGMOG00000008654	cherp	99	77.827	Gadus_morhua
ENSPREG00000020774	cherp	79	66.353	ENSGALG00000003824	CHERP	88	64.293	Gallus_gallus
ENSPREG00000020774	cherp	99	79.344	ENSGACG00000002053	cherp	98	78.907	Gasterosteus_aculeatus
ENSPREG00000020774	cherp	99	64.624	ENSGAGG00000014208	CHERP	99	65.409	Gopherus_agassizii
ENSPREG00000020774	cherp	99	85.698	ENSHBUG00000007405	cherp	99	85.809	Haplochromis_burtoni
ENSPREG00000020774	cherp	99	65.016	ENSHGLG00000002993	CHERP	99	65.595	Heterocephalus_glaber_female
ENSPREG00000020774	cherp	79	79.558	ENSHCOG00000007691	cherp	99	76.623	Hippocampus_comes
ENSPREG00000020774	cherp	99	71.209	ENSIPUG00000025008	cherp	99	71.806	Ictalurus_punctatus
ENSPREG00000020774	cherp	98	65.435	ENSSTOG00000012089	CHERP	99	66.052	Ictidomys_tridecemlineatus
ENSPREG00000020774	cherp	99	61.105	ENSJJAG00000017982	Cherp	81	67.065	Jaculus_jaculus
ENSPREG00000020774	cherp	99	85.794	ENSKMAG00000009101	cherp	99	86.349	Kryptolebias_marmoratus
ENSPREG00000020774	cherp	78	85.190	ENSLBEG00000007586	cherp	91	85.614	Labrus_bergylta
ENSPREG00000020774	cherp	79	66.537	ENSLACG00000018221	CHERP	99	63.770	Latimeria_chalumnae
ENSPREG00000020774	cherp	99	70.658	ENSLOCG00000003654	cherp	99	71.013	Lepisosteus_oculatus
ENSPREG00000020774	cherp	99	65.372	ENSLAFG00000009096	CHERP	100	67.927	Loxodonta_africana
ENSPREG00000020774	cherp	99	63.484	ENSMFAG00000033267	CHERP	99	64.308	Macaca_fascicularis
ENSPREG00000020774	cherp	79	65.526	ENSMMUG00000012958	CHERP	82	65.535	Macaca_mulatta
ENSPREG00000020774	cherp	99	63.484	ENSMNEG00000004125	CHERP	99	64.308	Macaca_nemestrina
ENSPREG00000020774	cherp	89	69.760	ENSMLEG00000044337	CHERP	99	69.760	Mandrillus_leucophaeus
ENSPREG00000020774	cherp	99	85.428	ENSMAMG00000022269	cherp	99	85.539	Mastacembelus_armatus
ENSPREG00000020774	cherp	99	85.809	ENSMZEG00005018014	cherp	99	85.920	Maylandia_zebra
ENSPREG00000020774	cherp	68	68.025	ENSMGAG00000005571	CHERP	96	63.732	Meleagris_gallopavo
ENSPREG00000020774	cherp	99	63.877	ENSMAUG00000015856	Cherp	99	64.067	Mesocricetus_auratus
ENSPREG00000020774	cherp	99	64.537	ENSMICG00000004577	CHERP	99	65.521	Microcebus_murinus
ENSPREG00000020774	cherp	99	65.059	ENSMOCG00000014697	Cherp	99	64.995	Microtus_ochrogaster
ENSPREG00000020774	cherp	99	82.307	ENSMMOG00000008525	cherp	96	82.867	Mola_mola
ENSPREG00000020774	cherp	99	83.903	ENSMALG00000020688	cherp	99	83.043	Monopterus_albus
ENSPREG00000020774	cherp	99	64.263	MGP_CAROLIEiJ_G0031220	Cherp	99	64.513	Mus_caroli
ENSPREG00000020774	cherp	79	65.359	ENSMUSG00000052488	Cherp	99	64.482	Mus_musculus
ENSPREG00000020774	cherp	99	64.637	MGP_PahariEiJ_G0021685	Cherp	99	64.674	Mus_pahari
ENSPREG00000020774	cherp	99	64.574	MGP_SPRETEiJ_G0032341	Cherp	99	64.650	Mus_spretus
ENSPREG00000020774	cherp	79	66.711	ENSMPUG00000016023	CHERP	97	65.079	Mustela_putorius_furo
ENSPREG00000020774	cherp	79	61.538	ENSMLUG00000013881	CHERP	99	61.383	Myotis_lucifugus
ENSPREG00000020774	cherp	99	81.998	ENSNBRG00000001914	cherp	81	84.478	Neolamprologus_brichardi
ENSPREG00000020774	cherp	99	65.129	ENSNLEG00000005536	CHERP	99	64.957	Nomascus_leucogenys
ENSPREG00000020774	cherp	92	76.531	ENSMEUG00000010840	CHERP	91	76.531	Notamacropus_eugenii
ENSPREG00000020774	cherp	78	67.699	ENSODEG00000001528	CHERP	99	65.260	Octodon_degus
ENSPREG00000020774	cherp	99	84.809	ENSONIG00000007686	cherp	99	84.918	Oreochromis_niloticus
ENSPREG00000020774	cherp	99	83.147	ENSORLG00000000138	cherp	99	81.250	Oryzias_latipes
ENSPREG00000020774	cherp	99	83.036	ENSORLG00020013142	cherp	99	81.138	Oryzias_latipes_hni
ENSPREG00000020774	cherp	99	82.589	ENSORLG00015008911	cherp	99	80.915	Oryzias_latipes_hsok
ENSPREG00000020774	cherp	99	83.259	ENSOMEG00000016947	cherp	99	82.720	Oryzias_melastigma
ENSPREG00000020774	cherp	99	63.386	ENSOGAG00000005834	CHERP	99	64.499	Otolemur_garnettii
ENSPREG00000020774	cherp	99	56.646	ENSOARG00000018876	CHERP	97	60.453	Ovis_aries
ENSPREG00000020774	cherp	99	63.312	ENSPPAG00000029195	CHERP	99	64.557	Pan_paniscus
ENSPREG00000020774	cherp	99	64.339	ENSPPRG00000003275	CHERP	99	64.339	Panthera_pardus
ENSPREG00000020774	cherp	98	55.458	ENSPTIG00000019778	CHERP	84	56.138	Panthera_tigris_altaica
ENSPREG00000020774	cherp	99	64.157	ENSPTRG00000010647	CHERP	99	65.315	Pan_troglodytes
ENSPREG00000020774	cherp	99	63.484	ENSPANG00000011698	CHERP	99	64.308	Papio_anubis
ENSPREG00000020774	cherp	78	64.365	ENSPKIG00000000423	cherp	99	65.567	Paramormyrops_kingsleyae
ENSPREG00000020774	cherp	98	64.719	ENSPSIG00000011974	CHERP	99	64.973	Pelodiscus_sinensis
ENSPREG00000020774	cherp	89	81.731	ENSPMGG00000023606	cherp	90	81.731	Periophthalmus_magnuspinnatus
ENSPREG00000020774	cherp	99	63.836	ENSPEMG00000011238	Cherp	99	63.979	Peromyscus_maniculatus_bairdii
ENSPREG00000020774	cherp	100	98.117	ENSPFOG00000016899	cherp	100	98.117	Poecilia_formosa
ENSPREG00000020774	cherp	84	93.438	ENSPMEG00000002214	cherp	99	93.438	Poecilia_mexicana
ENSPREG00000020774	cherp	99	62.688	ENSPPYG00000009691	CHERP	99	62.943	Pongo_abelii
ENSPREG00000020774	cherp	99	62.863	ENSPCAG00000001337	CHERP	90	83.871	Procavia_capensis
ENSPREG00000020774	cherp	99	62.073	ENSPVAG00000004320	CHERP	90	83.871	Pteropus_vampyrus
ENSPREG00000020774	cherp	99	85.698	ENSPNYG00000003942	cherp	99	85.809	Pundamilia_nyererei
ENSPREG00000020774	cherp	99	70.525	ENSPNAG00000017179	cherp	99	71.321	Pygocentrus_nattereri
ENSPREG00000020774	cherp	99	64.157	ENSRNOG00000012323	Cherp	99	64.407	Rattus_norvegicus
ENSPREG00000020774	cherp	99	65.236	ENSRBIG00000038621	CHERP	99	65.064	Rhinopithecus_bieti
ENSPREG00000020774	cherp	99	63.484	ENSRROG00000040770	CHERP	99	64.308	Rhinopithecus_roxellana
ENSPREG00000020774	cherp	99	63.417	ENSSBOG00000014492	CHERP	99	64.662	Saimiri_boliviensis_boliviensis
ENSPREG00000020774	cherp	78	58.162	ENSSFOG00015008022	cherp	87	77.612	Scleropages_formosus
ENSPREG00000020774	cherp	99	82.665	ENSSMAG00000005362	cherp	99	77.524	Scophthalmus_maximus
ENSPREG00000020774	cherp	99	84.582	ENSSDUG00000019712	cherp	99	84.799	Seriola_dumerili
ENSPREG00000020774	cherp	99	85.104	ENSSLDG00000012659	cherp	99	85.323	Seriola_lalandi_dorsalis
ENSPREG00000020774	cherp	99	66.007	ENSSPUG00000008901	CHERP	99	66.958	Sphenodon_punctatus
ENSPREG00000020774	cherp	99	86.047	ENSSPAG00000010681	cherp	99	85.825	Stegastes_partitus
ENSPREG00000020774	cherp	99	64.650	ENSSSCG00000013860	CHERP	99	65.632	Sus_scrofa
ENSPREG00000020774	cherp	79	66.265	ENSTGUG00000000680	CHERP	99	64.108	Taeniopygia_guttata
ENSPREG00000020774	cherp	99	77.741	ENSTRUG00000007429	cherp	99	78.370	Takifugu_rubripes
ENSPREG00000020774	cherp	99	78.865	ENSTNIG00000003363	cherp	99	79.264	Tetraodon_nigroviridis
ENSPREG00000020774	cherp	88	65.625	ENSTTRG00000015006	CHERP	89	70.312	Tursiops_truncatus
ENSPREG00000020774	cherp	99	61.224	ENSUAMG00000017295	CHERP	80	66.120	Ursus_americanus
ENSPREG00000020774	cherp	99	64.097	ENSVVUG00000016546	CHERP	99	64.731	Vulpes_vulpes