EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000020932 (Gene tree)
Gene ID: 103478607
Gene Symbol: ccdc12
Alias: zgc:101038
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 7876 bases
Position: chrLG16:17395083-17402958
Accession: 103478607
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000030913	cwf18	PF08315.12	5.7e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000031265	-	609	XM_008432564	ENSPREP00000030913	202 (aa)	XP_008430786	UPI0004A47D64

Gene Model

Click here to download ENSPREG00000020932's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000020932's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000020932	ccdc12	84	65.698	ENSG00000160799	CCDC12	91	71.242	Homo_sapiens
ENSPREG00000020932	ccdc12	82	92.771	ENSAPOG00000014426	ccdc12	61	92.771	Acanthochromis_polyacanthus
ENSPREG00000020932	ccdc12	79	70.370	ENSAMEG00000012658	CCDC12	96	70.370	Ailuropoda_melanoleuca
ENSPREG00000020932	ccdc12	60	94.215	ENSACIG00000022676	-	86	94.215	Amphilophus_citrinellus
ENSPREG00000020932	ccdc12	55	95.536	ENSACIG00000015192	ccdc12	80	95.536	Amphilophus_citrinellus
ENSPREG00000020932	ccdc12	79	93.082	ENSAOCG00000024127	ccdc12	95	93.082	Amphiprion_ocellaris
ENSPREG00000020932	ccdc12	82	92.169	ENSAPEG00000009155	ccdc12	87	92.169	Amphiprion_percula
ENSPREG00000020932	ccdc12	66	93.284	ENSATEG00000004807	ccdc12	100	93.284	Anabas_testudineus
ENSPREG00000020932	ccdc12	63	74.046	ENSAPLG00000005482	CCDC12	94	74.046	Anas_platyrhynchos
ENSPREG00000020932	ccdc12	84	70.115	ENSACAG00000004727	CCDC12	89	70.115	Anolis_carolinensis
ENSPREG00000020932	ccdc12	66	70.149	ENSANAG00000024483	CCDC12	100	70.149	Aotus_nancymaae
ENSPREG00000020932	ccdc12	83	74.405	ENSACLG00000012742	-	100	74.405	Astatotilapia_calliptera
ENSPREG00000020932	ccdc12	81	89.571	ENSACLG00000005356	ccdc12	100	89.571	Astatotilapia_calliptera
ENSPREG00000020932	ccdc12	81	82.822	ENSAMXG00000016319	ccdc12	100	82.822	Astyanax_mexicanus
ENSPREG00000020932	ccdc12	71	73.103	ENSBTAG00000011311	CCDC12	96	69.325	Bos_taurus
ENSPREG00000020932	ccdc12	67	41.606	WBGene00022092	Y69A2AR.21	86	40.260	Caenorhabditis_elegans
ENSPREG00000020932	ccdc12	79	69.136	ENSCJAG00000002280	CCDC12	96	69.136	Callithrix_jacchus
ENSPREG00000020932	ccdc12	79	70.370	ENSCAFG00000013588	CCDC12	96	70.370	Canis_familiaris
ENSPREG00000020932	ccdc12	86	65.909	ENSCAFG00020014024	CCDC12	97	65.909	Canis_lupus_dingo
ENSPREG00000020932	ccdc12	71	73.103	ENSCHIG00000014512	CCDC12	96	69.325	Capra_hircus
ENSPREG00000020932	ccdc12	79	69.136	ENSTSYG00000032837	CCDC12	96	69.136	Carlito_syrichta
ENSPREG00000020932	ccdc12	79	70.370	ENSCPOG00000032515	CCDC12	96	70.370	Cavia_porcellus
ENSPREG00000020932	ccdc12	88	64.641	ENSCCAG00000020126	CCDC12	100	64.641	Cebus_capucinus
ENSPREG00000020932	ccdc12	88	54.144	ENSCATG00000033681	CCDC12	100	54.144	Cercocebus_atys
ENSPREG00000020932	ccdc12	79	70.370	ENSCLAG00000016013	CCDC12	96	70.370	Chinchilla_lanigera
ENSPREG00000020932	ccdc12	88	63.536	ENSCSAG00000016154	CCDC12	100	63.536	Chlorocebus_sabaeus
ENSPREG00000020932	ccdc12	79	71.779	ENSCPBG00000015804	CCDC12	77	71.779	Chrysemys_picta_bellii
ENSPREG00000020932	ccdc12	76	53.548	ENSCING00000005261	-	90	53.548	Ciona_intestinalis
ENSPREG00000020932	ccdc12	79	68.944	ENSCANG00000020857	CCDC12	89	68.519	Colobus_angolensis_palliatus
ENSPREG00000020932	ccdc12	79	69.753	ENSCGRG00001000459	Ccdc12	96	69.753	Cricetulus_griseus_chok1gshd
ENSPREG00000020932	ccdc12	79	69.753	ENSCGRG00000012816	Ccdc12	96	69.753	Cricetulus_griseus_crigri
ENSPREG00000020932	ccdc12	81	92.638	ENSCSEG00000004543	ccdc12	100	92.638	Cynoglossus_semilaevis
ENSPREG00000020932	ccdc12	66	97.761	ENSCVAG00000011342	ccdc12	100	97.761	Cyprinodon_variegatus
ENSPREG00000020932	ccdc12	81	84.049	ENSDARG00000023003	ccdc12	100	84.049	Danio_rerio
ENSPREG00000020932	ccdc12	79	62.733	ENSDORG00000024399	-	96	62.733	Dipodomys_ordii
ENSPREG00000020932	ccdc12	71	71.034	ENSDORG00000016567	-	96	70.186	Dipodomys_ordii
ENSPREG00000020932	ccdc12	80	41.463	FBgn0039732	CG15525	94	41.463	Drosophila_melanogaster
ENSPREG00000020932	ccdc12	53	67.890	ENSETEG00000000030	CCDC12	95	67.890	Echinops_telfairi
ENSPREG00000020932	ccdc12	81	60.366	ENSEBUG00000005674	ccdc12	100	62.805	Eptatretus_burgeri
ENSPREG00000020932	ccdc12	94	62.304	ENSEASG00005008148	-	78	62.304	Equus_asinus_asinus
ENSPREG00000020932	ccdc12	79	64.198	ENSECAG00000008649	CCDC12	96	64.198	Equus_caballus
ENSPREG00000020932	ccdc12	81	82.424	ENSELUG00000024105	ccdc12	100	82.424	Esox_lucius
ENSPREG00000020932	ccdc12	79	69.753	ENSFCAG00000015474	CCDC12	96	69.753	Felis_catus
ENSPREG00000020932	ccdc12	77	63.522	ENSFALG00000001895	CCDC12	98	63.522	Ficedula_albicollis
ENSPREG00000020932	ccdc12	79	70.370	ENSFDAG00000002549	CCDC12	97	70.370	Fukomys_damarensis
ENSPREG00000020932	ccdc12	88	92.655	ENSFHEG00000016247	ccdc12	100	92.655	Fundulus_heteroclitus
ENSPREG00000020932	ccdc12	81	76.074	ENSGMOG00000016901	ccdc12	100	76.074	Gadus_morhua
ENSPREG00000020932	ccdc12	81	97.546	ENSGAFG00000006762	ccdc12	100	97.546	Gambusia_affinis
ENSPREG00000020932	ccdc12	81	90.184	ENSGACG00000008629	ccdc12	100	90.184	Gasterosteus_aculeatus
ENSPREG00000020932	ccdc12	79	72.840	ENSGAGG00000019688	CCDC12	95	72.840	Gopherus_agassizii
ENSPREG00000020932	ccdc12	84	65.698	ENSGGOG00000009012	CCDC12	95	65.698	Gorilla_gorilla
ENSPREG00000020932	ccdc12	81	90.184	ENSHBUG00000016447	ccdc12	100	90.184	Haplochromis_burtoni
ENSPREG00000020932	ccdc12	79	70.370	ENSHGLG00000014058	CCDC12	96	70.370	Heterocephalus_glaber_female
ENSPREG00000020932	ccdc12	79	70.370	ENSHGLG00100005918	CCDC12	96	70.370	Heterocephalus_glaber_male
ENSPREG00000020932	ccdc12	81	87.195	ENSHCOG00000015164	ccdc12	100	87.195	Hippocampus_comes
ENSPREG00000020932	ccdc12	79	78.616	ENSIPUG00000001310	Ccdc12	97	78.616	Ictalurus_punctatus
ENSPREG00000020932	ccdc12	79	71.429	ENSSTOG00000003085	CCDC12	96	71.429	Ictidomys_tridecemlineatus
ENSPREG00000020932	ccdc12	79	69.136	ENSJJAG00000014918	Ccdc12	96	69.136	Jaculus_jaculus
ENSPREG00000020932	ccdc12	81	88.485	ENSKMAG00000013891	ccdc12	100	88.485	Kryptolebias_marmoratus
ENSPREG00000020932	ccdc12	80	90.741	ENSLBEG00000024714	ccdc12	86	90.741	Labrus_bergylta
ENSPREG00000020932	ccdc12	83	82.143	ENSLOCG00000005683	ccdc12	93	82.143	Lepisosteus_oculatus
ENSPREG00000020932	ccdc12	55	77.679	ENSLAFG00000022573	-	98	77.679	Loxodonta_africana
ENSPREG00000020932	ccdc12	79	67.702	ENSLAFG00000027745	-	98	67.702	Loxodonta_africana
ENSPREG00000020932	ccdc12	88	63.536	ENSMFAG00000002976	CCDC12	100	63.536	Macaca_fascicularis
ENSPREG00000020932	ccdc12	88	63.536	ENSMMUG00000019810	CCDC12	100	63.536	Macaca_mulatta
ENSPREG00000020932	ccdc12	88	63.536	ENSMNEG00000035785	CCDC12	100	63.536	Macaca_nemestrina
ENSPREG00000020932	ccdc12	88	63.536	ENSMLEG00000038060	CCDC12	100	63.536	Mandrillus_leucophaeus
ENSPREG00000020932	ccdc12	81	92.638	ENSMAMG00000012165	ccdc12	100	92.638	Mastacembelus_armatus
ENSPREG00000020932	ccdc12	81	90.184	ENSMZEG00005014728	ccdc12	100	90.184	Maylandia_zebra
ENSPREG00000020932	ccdc12	77	79.355	ENSMZEG00005019013	-	96	79.355	Maylandia_zebra
ENSPREG00000020932	ccdc12	63	73.643	ENSMGAG00000002815	CCDC12	90	67.500	Meleagris_gallopavo
ENSPREG00000020932	ccdc12	79	68.519	ENSMAUG00000008879	Ccdc12	96	68.519	Mesocricetus_auratus
ENSPREG00000020932	ccdc12	79	69.136	ENSMICG00000032886	CCDC12	96	69.325	Microcebus_murinus
ENSPREG00000020932	ccdc12	79	69.136	ENSMOCG00000004483	Ccdc12	96	69.136	Microtus_ochrogaster
ENSPREG00000020932	ccdc12	55	93.694	ENSMMOG00000001860	ccdc12	77	93.694	Mola_mola
ENSPREG00000020932	ccdc12	79	66.667	ENSMODG00000025021	-	96	66.667	Monodelphis_domestica
ENSPREG00000020932	ccdc12	79	74.074	ENSMODG00000013967	-	96	74.074	Monodelphis_domestica
ENSPREG00000020932	ccdc12	79	64.815	ENSMODG00000022615	-	96	64.815	Monodelphis_domestica
ENSPREG00000020932	ccdc12	81	93.865	ENSMALG00000011850	ccdc12	100	93.865	Monopterus_albus
ENSPREG00000020932	ccdc12	79	69.753	MGP_CAROLIEiJ_G0032737	-	96	69.753	Mus_caroli
ENSPREG00000020932	ccdc12	79	70.122	ENSMUSG00000019659	Ccdc12	96	70.122	Mus_musculus
ENSPREG00000020932	ccdc12	79	69.753	MGP_PahariEiJ_G0015604	Ccdc12	96	69.753	Mus_pahari
ENSPREG00000020932	ccdc12	79	70.122	MGP_SPRETEiJ_G0033885	Ccdc12	96	70.122	Mus_spretus
ENSPREG00000020932	ccdc12	79	67.702	ENSMLUG00000009547	CCDC12	96	67.702	Myotis_lucifugus
ENSPREG00000020932	ccdc12	79	69.753	ENSNGAG00000004149	Ccdc12	96	69.753	Nannospalax_galili
ENSPREG00000020932	ccdc12	81	75.429	ENSNBRG00000015275	ccdc12	100	75.429	Neolamprologus_brichardi
ENSPREG00000020932	ccdc12	79	69.565	ENSNLEG00000006219	CCDC12	96	69.136	Nomascus_leucogenys
ENSPREG00000020932	ccdc12	75	68.421	ENSOPRG00000005086	CCDC12	91	68.421	Ochotona_princeps
ENSPREG00000020932	ccdc12	79	70.370	ENSODEG00000012202	CCDC12	96	70.370	Octodon_degus
ENSPREG00000020932	ccdc12	81	90.184	ENSONIG00000003061	ccdc12	100	90.184	Oreochromis_niloticus
ENSPREG00000020932	ccdc12	65	73.684	ENSOANG00000004263	-	100	73.684	Ornithorhynchus_anatinus
ENSPREG00000020932	ccdc12	79	69.753	ENSOCUG00000012431	CCDC12	82	69.753	Oryctolagus_cuniculus
ENSPREG00000020932	ccdc12	81	89.091	ENSORLG00000008126	ccdc12	100	89.091	Oryzias_latipes
ENSPREG00000020932	ccdc12	81	92.025	ENSORLG00020013927	ccdc12	100	92.025	Oryzias_latipes_hni
ENSPREG00000020932	ccdc12	81	92.025	ENSORLG00015020115	ccdc12	100	92.025	Oryzias_latipes_hsok
ENSPREG00000020932	ccdc12	81	92.638	ENSOMEG00000014082	ccdc12	100	92.638	Oryzias_melastigma
ENSPREG00000020932	ccdc12	81	92.638	ENSOMEG00000022304	ccdc12	100	92.638	Oryzias_melastigma
ENSPREG00000020932	ccdc12	55	75.000	ENSOGAG00000016807	CCDC12	100	75.000	Otolemur_garnettii
ENSPREG00000020932	ccdc12	59	73.950	ENSOARG00000006426	CCDC12	100	69.343	Ovis_aries
ENSPREG00000020932	ccdc12	84	65.698	ENSPPAG00000028782	CCDC12	95	65.698	Pan_paniscus
ENSPREG00000020932	ccdc12	79	69.753	ENSPPRG00000013547	CCDC12	96	69.753	Panthera_pardus
ENSPREG00000020932	ccdc12	86	66.286	ENSPTIG00000014875	CCDC12	99	66.286	Panthera_tigris_altaica
ENSPREG00000020932	ccdc12	84	65.698	ENSPTRG00000014862	CCDC12	95	65.698	Pan_troglodytes
ENSPREG00000020932	ccdc12	79	68.519	ENSPANG00000017485	CCDC12	91	68.519	Papio_anubis
ENSPREG00000020932	ccdc12	81	75.000	ENSPKIG00000019130	ccdc12	100	77.439	Paramormyrops_kingsleyae
ENSPREG00000020932	ccdc12	55	85.586	ENSPSIG00000010867	CCDC12	100	85.586	Pelodiscus_sinensis
ENSPREG00000020932	ccdc12	81	90.184	ENSPMGG00000012211	ccdc12	100	90.184	Periophthalmus_magnuspinnatus
ENSPREG00000020932	ccdc12	79	54.938	ENSPEMG00000001376	-	96	54.938	Peromyscus_maniculatus_bairdii
ENSPREG00000020932	ccdc12	79	69.753	ENSPEMG00000022196	-	96	69.753	Peromyscus_maniculatus_bairdii
ENSPREG00000020932	ccdc12	78	73.248	ENSPMAG00000000005	ccdc12	92	73.248	Petromyzon_marinus
ENSPREG00000020932	ccdc12	79	75.000	ENSPCIG00000025941	CCDC12	96	75.000	Phascolarctos_cinereus
ENSPREG00000020932	ccdc12	81	98.773	ENSPFOG00000000343	ccdc12	100	98.773	Poecilia_formosa
ENSPREG00000020932	ccdc12	81	98.773	ENSPLAG00000019010	ccdc12	100	98.773	Poecilia_latipinna
ENSPREG00000020932	ccdc12	100	98.020	ENSPMEG00000022371	ccdc12	100	98.020	Poecilia_mexicana
ENSPREG00000020932	ccdc12	95	61.340	ENSPPYG00000013924	CCDC12	95	61.340	Pongo_abelii
ENSPREG00000020932	ccdc12	79	69.753	ENSPCAG00000005800	CCDC12	96	69.753	Procavia_capensis
ENSPREG00000020932	ccdc12	79	68.712	ENSPCOG00000018682	CCDC12	89	69.325	Propithecus_coquereli
ENSPREG00000020932	ccdc12	79	69.753	ENSPVAG00000004204	CCDC12	96	69.753	Pteropus_vampyrus
ENSPREG00000020932	ccdc12	81	90.184	ENSPNYG00000016295	ccdc12	100	90.184	Pundamilia_nyererei
ENSPREG00000020932	ccdc12	55	92.793	ENSPNAG00000028558	ccdc12	90	92.793	Pygocentrus_nattereri
ENSPREG00000020932	ccdc12	79	69.753	ENSRNOG00000020946	Ccdc12	96	69.753	Rattus_norvegicus
ENSPREG00000020932	ccdc12	88	63.536	ENSRBIG00000039910	CCDC12	100	63.536	Rhinopithecus_bieti
ENSPREG00000020932	ccdc12	79	68.519	ENSRROG00000039721	CCDC12	96	68.519	Rhinopithecus_roxellana
ENSPREG00000020932	ccdc12	88	64.641	ENSSBOG00000035443	CCDC12	100	64.641	Saimiri_boliviensis_boliviensis
ENSPREG00000020932	ccdc12	79	74.375	ENSSHAG00000003265	-	96	74.375	Sarcophilus_harrisii
ENSPREG00000020932	ccdc12	81	78.659	ENSSFOG00015001307	ccdc12	100	78.659	Scleropages_formosus
ENSPREG00000020932	ccdc12	73	92.568	ENSSMAG00000019856	ccdc12	100	90.854	Scophthalmus_maximus
ENSPREG00000020932	ccdc12	81	90.184	ENSSDUG00000006549	ccdc12	100	90.184	Seriola_dumerili
ENSPREG00000020932	ccdc12	81	94.479	ENSSLDG00000015956	ccdc12	100	94.479	Seriola_lalandi_dorsalis
ENSPREG00000020932	ccdc12	73	53.061	ENSSPUG00000013054	CCDC12	91	53.061	Sphenodon_punctatus
ENSPREG00000020932	ccdc12	81	92.638	ENSSPAG00000007010	ccdc12	100	92.638	Stegastes_partitus
ENSPREG00000020932	ccdc12	79	69.565	ENSSSCG00000011329	-	96	69.565	Sus_scrofa
ENSPREG00000020932	ccdc12	50	51.485	ENSSSCG00000007882	-	69	51.485	Sus_scrofa
ENSPREG00000020932	ccdc12	53	66.972	ENSTGUG00000000186	CCDC12	86	66.972	Taeniopygia_guttata
ENSPREG00000020932	ccdc12	82	79.394	ENSTRUG00000014023	ccdc12	86	79.394	Takifugu_rubripes
ENSPREG00000020932	ccdc12	82	84.848	ENSTNIG00000018407	ccdc12	99	84.848	Tetraodon_nigroviridis
ENSPREG00000020932	ccdc12	79	47.239	ENSTBEG00000000048	CCDC12	96	47.239	Tupaia_belangeri
ENSPREG00000020932	ccdc12	79	67.081	ENSTTRG00000015854	CCDC12	96	66.667	Tursiops_truncatus
ENSPREG00000020932	ccdc12	79	64.198	ENSUAMG00000025548	CCDC12	93	74.265	Ursus_americanus
ENSPREG00000020932	ccdc12	79	70.370	ENSUMAG00000004346	CCDC12	96	70.370	Ursus_maritimus
ENSPREG00000020932	ccdc12	53	59.633	ENSVPAG00000000070	-	95	59.633	Vicugna_pacos
ENSPREG00000020932	ccdc12	79	70.370	ENSVVUG00000004582	CCDC12	96	70.370	Vulpes_vulpes
ENSPREG00000020932	ccdc12	66	76.119	ENSXETG00000013123	ccdc12	99	76.119	Xenopus_tropicalis
ENSPREG00000020932	ccdc12	81	98.160	ENSXCOG00000019741	ccdc12	100	98.160	Xiphophorus_couchianus
ENSPREG00000020932	ccdc12	100	95.545	ENSXMAG00000014098	ccdc12	100	95.545	Xiphophorus_maculatus