EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000020951 (Gene tree)
Gene ID: 103478821
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 9705 bases
Position: chrLG16:33152318-33162022
Accession: 103478821
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000030947	POP1	PF06978.11	4.1e-36	1	2
ENSPREP00000030947	POP1	PF06978.11	4.1e-36	2	2
ENSPREP00000030947	POPLD	PF08170.12	5.2e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000031299	POP1-201	2886	XM_008432881	ENSPREP00000030947	960 (aa)	XP_008431103	UPI0004A2E3B1

Gene Model

Click here to download ENSPREG00000020951's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03008	Ribosome biogenesis in eukaryotes	KEGG
pret03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000020951's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000020951	POP1	100	48.316	ENSG00000104356	POP1	100	48.654	Homo_sapiens
ENSPREG00000020951	POP1	100	74.141	ENSAPOG00000008198	pop1	100	74.141	Acanthochromis_polyacanthus
ENSPREG00000020951	POP1	100	47.961	ENSAMEG00000000556	POP1	100	48.058	Ailuropoda_melanoleuca
ENSPREG00000020951	POP1	100	66.936	ENSACIG00000004169	POP1	100	66.431	Amphilophus_citrinellus
ENSPREG00000020951	POP1	100	74.216	ENSAOCG00000010991	pop1	100	74.216	Amphiprion_ocellaris
ENSPREG00000020951	POP1	100	68.100	ENSAPEG00000007607	pop1	100	67.700	Amphiprion_percula
ENSPREG00000020951	POP1	100	70.411	ENSATEG00000024814	POP1	100	70.812	Anabas_testudineus
ENSPREG00000020951	POP1	93	50.053	ENSAPLG00000014418	POP1	99	50.212	Anas_platyrhynchos
ENSPREG00000020951	POP1	100	47.104	ENSACAG00000016083	POP1	100	47.093	Anolis_carolinensis
ENSPREG00000020951	POP1	87	53.636	ENSANAG00000026360	POP1	99	53.636	Aotus_nancymaae
ENSPREG00000020951	POP1	100	70.482	ENSACLG00000010951	pop1	100	70.653	Astatotilapia_calliptera
ENSPREG00000020951	POP1	100	55.807	ENSAMXG00000014483	POP1	100	55.807	Astyanax_mexicanus
ENSPREG00000020951	POP1	100	49.372	ENSBTAG00000012596	POP1	100	49.565	Bos_taurus
ENSPREG00000020951	POP1	100	48.094	ENSCJAG00000015567	POP1	100	48.535	Callithrix_jacchus
ENSPREG00000020951	POP1	100	49.202	ENSCAFG00000000469	POP1	100	49.202	Canis_familiaris
ENSPREG00000020951	POP1	100	48.541	ENSCAFG00020026765	POP1	100	48.541	Canis_lupus_dingo
ENSPREG00000020951	POP1	100	48.259	ENSCHIG00000017066	POP1	100	48.797	Capra_hircus
ENSPREG00000020951	POP1	100	47.206	ENSTSYG00000003097	POP1	100	47.353	Carlito_syrichta
ENSPREG00000020951	POP1	100	46.102	ENSCAPG00000007251	POP1	100	46.102	Cavia_aperea
ENSPREG00000020951	POP1	100	47.047	ENSCPOG00000002901	POP1	100	47.047	Cavia_porcellus
ENSPREG00000020951	POP1	100	48.778	ENSCCAG00000018939	POP1	100	48.974	Cebus_capucinus
ENSPREG00000020951	POP1	100	48.560	ENSCATG00000040916	POP1	100	48.560	Cercocebus_atys
ENSPREG00000020951	POP1	100	46.770	ENSCLAG00000007208	POP1	97	46.770	Chinchilla_lanigera
ENSPREG00000020951	POP1	91	50.427	ENSCSAG00000012340	POP1	98	50.432	Chlorocebus_sabaeus
ENSPREG00000020951	POP1	93	47.213	ENSCHOG00000011432	POP1	96	47.424	Choloepus_hoffmanni
ENSPREG00000020951	POP1	100	50.197	ENSCPBG00000006373	POP1	100	50.689	Chrysemys_picta_bellii
ENSPREG00000020951	POP1	83	33.585	ENSCING00000008323	-	89	33.208	Ciona_intestinalis
ENSPREG00000020951	POP1	100	48.607	ENSCANG00000001647	POP1	100	48.607	Colobus_angolensis_palliatus
ENSPREG00000020951	POP1	100	46.356	ENSCGRG00001017308	Pop1	100	46.453	Cricetulus_griseus_chok1gshd
ENSPREG00000020951	POP1	100	43.799	ENSCGRG00000010824	Pop1	100	44.158	Cricetulus_griseus_crigri
ENSPREG00000020951	POP1	100	66.230	ENSCSEG00000008737	POP1	100	66.734	Cynoglossus_semilaevis
ENSPREG00000020951	POP1	100	78.221	ENSCVAG00000022248	pop1	100	78.221	Cyprinodon_variegatus
ENSPREG00000020951	POP1	53	54.813	ENSDARG00000102087	pop1	98	54.224	Danio_rerio
ENSPREG00000020951	POP1	100	45.125	ENSDNOG00000019974	POP1	100	45.336	Dasypus_novemcinctus
ENSPREG00000020951	POP1	100	42.541	ENSDORG00000015384	Pop1	100	42.733	Dipodomys_ordii
ENSPREG00000020951	POP1	88	46.194	ENSETEG00000007839	POP1	88	46.194	Echinops_telfairi
ENSPREG00000020951	POP1	100	47.864	ENSEASG00005003189	POP1	98	47.864	Equus_asinus_asinus
ENSPREG00000020951	POP1	100	48.058	ENSECAG00000024236	POP1	100	48.252	Equus_caballus
ENSPREG00000020951	POP1	50	74.026	ENSEEUG00000003050	-	53	78.788	Erinaceus_europaeus
ENSPREG00000020951	POP1	100	61.726	ENSELUG00000003526	pop1	100	62.132	Esox_lucius
ENSPREG00000020951	POP1	100	47.665	ENSFCAG00000002168	POP1	100	47.665	Felis_catus
ENSPREG00000020951	POP1	100	47.013	ENSFALG00000005711	POP1	100	47.276	Ficedula_albicollis
ENSPREG00000020951	POP1	100	46.667	ENSFDAG00000017068	POP1	100	46.667	Fukomys_damarensis
ENSPREG00000020951	POP1	100	77.653	ENSFHEG00000019518	pop1	100	77.653	Fundulus_heteroclitus
ENSPREG00000020951	POP1	100	59.259	ENSGMOG00000000659	POP1	100	59.159	Gadus_morhua
ENSPREG00000020951	POP1	100	92.827	ENSGAFG00000019770	POP1	100	92.827	Gambusia_affinis
ENSPREG00000020951	POP1	100	63.654	ENSGACG00000003499	pop1	100	63.654	Gasterosteus_aculeatus
ENSPREG00000020951	POP1	100	49.367	ENSGAGG00000011737	POP1	98	49.610	Gopherus_agassizii
ENSPREG00000020951	POP1	100	48.266	ENSGGOG00000003176	POP1	100	48.752	Gorilla_gorilla
ENSPREG00000020951	POP1	100	70.683	ENSHBUG00000021583	pop1	100	70.854	Haplochromis_burtoni
ENSPREG00000020951	POP1	100	46.500	ENSHGLG00000006029	POP1	100	46.692	Heterocephalus_glaber_female
ENSPREG00000020951	POP1	100	46.500	ENSHGLG00100016879	POP1	100	46.692	Heterocephalus_glaber_male
ENSPREG00000020951	POP1	100	62.387	ENSHCOG00000013888	pop1	95	65.072	Hippocampus_comes
ENSPREG00000020951	POP1	99	55.340	ENSIPUG00000018336	pop1	100	55.286	Ictalurus_punctatus
ENSPREG00000020951	POP1	100	46.563	ENSSTOG00000011455	POP1	97	46.563	Ictidomys_tridecemlineatus
ENSPREG00000020951	POP1	100	46.298	ENSJJAG00000013325	Pop1	100	46.298	Jaculus_jaculus
ENSPREG00000020951	POP1	100	73.975	ENSKMAG00000001346	POP1	100	74.078	Kryptolebias_marmoratus
ENSPREG00000020951	POP1	100	64.242	ENSLBEG00000024457	POP1	100	64.139	Labrus_bergylta
ENSPREG00000020951	POP1	93	50.570	ENSLACG00000012498	POP1	98	51.033	Latimeria_chalumnae
ENSPREG00000020951	POP1	100	54.750	ENSLOCG00000009817	POP1	100	55.380	Lepisosteus_oculatus
ENSPREG00000020951	POP1	100	47.881	ENSLAFG00000010770	POP1	100	48.500	Loxodonta_africana
ENSPREG00000020951	POP1	100	48.464	ENSMFAG00000000347	POP1	100	48.464	Macaca_fascicularis
ENSPREG00000020951	POP1	100	48.273	ENSMNEG00000036870	POP1	100	48.273	Macaca_nemestrina
ENSPREG00000020951	POP1	100	48.656	ENSMLEG00000034986	POP1	100	48.656	Mandrillus_leucophaeus
ENSPREG00000020951	POP1	100	69.666	ENSMAMG00000004040	pop1	100	69.161	Mastacembelus_armatus
ENSPREG00000020951	POP1	100	70.382	ENSMZEG00005025448	pop1	100	70.553	Maylandia_zebra
ENSPREG00000020951	POP1	100	46.750	ENSMGAG00000012167	POP1	100	47.193	Meleagris_gallopavo
ENSPREG00000020951	POP1	100	47.013	ENSMAUG00000017537	Pop1	100	47.133	Mesocricetus_auratus
ENSPREG00000020951	POP1	100	47.081	ENSMICG00000004361	POP1	100	46.947	Microcebus_murinus
ENSPREG00000020951	POP1	100	47.019	ENSMOCG00000006356	Pop1	100	47.252	Microtus_ochrogaster
ENSPREG00000020951	POP1	100	63.963	ENSMMOG00000018242	pop1	100	63.963	Mola_mola
ENSPREG00000020951	POP1	100	45.629	ENSMODG00000006561	POP1	100	46.065	Monodelphis_domestica
ENSPREG00000020951	POP1	100	68.750	ENSMALG00000012621	POP1	100	68.712	Monopterus_albus
ENSPREG00000020951	POP1	100	45.134	MGP_CAROLIEiJ_G0019726	Pop1	100	45.134	Mus_caroli
ENSPREG00000020951	POP1	100	44.339	ENSMUSG00000022325	Pop1	100	44.742	Mus_musculus
ENSPREG00000020951	POP1	100	45.673	MGP_PahariEiJ_G0019735	Pop1	100	45.673	Mus_pahari
ENSPREG00000020951	POP1	100	45.202	MGP_SPRETEiJ_G0020622	Pop1	100	45.202	Mus_spretus
ENSPREG00000020951	POP1	100	47.734	ENSMPUG00000015250	POP1	100	47.734	Mustela_putorius_furo
ENSPREG00000020951	POP1	100	46.945	ENSMLUG00000010204	POP1	100	47.042	Myotis_lucifugus
ENSPREG00000020951	POP1	100	46.169	ENSNGAG00000001582	Pop1	100	46.264	Nannospalax_galili
ENSPREG00000020951	POP1	100	65.283	ENSNBRG00000002356	pop1	100	64.358	Neolamprologus_brichardi
ENSPREG00000020951	POP1	100	48.752	ENSNLEG00000002541	POP1	100	48.752	Nomascus_leucogenys
ENSPREG00000020951	POP1	87	54.142	ENSMEUG00000003118	POP1	90	54.142	Notamacropus_eugenii
ENSPREG00000020951	POP1	100	47.410	ENSOPRG00000007667	POP1	100	47.410	Ochotona_princeps
ENSPREG00000020951	POP1	100	46.731	ENSODEG00000003984	POP1	100	46.815	Octodon_degus
ENSPREG00000020951	POP1	100	70.783	ENSONIG00000016445	pop1	100	70.955	Oreochromis_niloticus
ENSPREG00000020951	POP1	61	45.924	ENSOANG00000001278	-	94	45.924	Ornithorhynchus_anatinus
ENSPREG00000020951	POP1	100	46.552	ENSOCUG00000017400	POP1	100	46.616	Oryctolagus_cuniculus
ENSPREG00000020951	POP1	100	70.842	ENSORLG00000002839	pop1	100	71.253	Oryzias_latipes
ENSPREG00000020951	POP1	91	69.256	ENSORLG00020022450	POP1	95	69.188	Oryzias_latipes_hni
ENSPREG00000020951	POP1	100	71.047	ENSORLG00015012746	POP1	100	71.458	Oryzias_latipes_hsok
ENSPREG00000020951	POP1	100	69.493	ENSOMEG00000006915	pop1	99	70.010	Oryzias_melastigma
ENSPREG00000020951	POP1	100	46.833	ENSOGAG00000001466	POP1	100	47.008	Otolemur_garnettii
ENSPREG00000020951	POP1	100	48.508	ENSPPAG00000018410	POP1	100	48.846	Pan_paniscus
ENSPREG00000020951	POP1	100	47.476	ENSPPRG00000005002	POP1	100	47.915	Panthera_pardus
ENSPREG00000020951	POP1	100	47.573	ENSPTIG00000016527	POP1	100	47.573	Panthera_tigris_altaica
ENSPREG00000020951	POP1	100	48.219	ENSPTRG00000020458	POP1	100	48.750	Pan_troglodytes
ENSPREG00000020951	POP1	100	48.752	ENSPANG00000009704	POP1	100	48.752	Papio_anubis
ENSPREG00000020951	POP1	100	59.451	ENSPKIG00000016325	POP1	100	59.451	Paramormyrops_kingsleyae
ENSPREG00000020951	POP1	100	48.982	ENSPSIG00000012343	POP1	100	49.370	Pelodiscus_sinensis
ENSPREG00000020951	POP1	100	61.439	ENSPMGG00000022253	POP1	100	61.155	Periophthalmus_magnuspinnatus
ENSPREG00000020951	POP1	99	45.671	ENSPEMG00000023633	Pop1	100	45.956	Peromyscus_maniculatus_bairdii
ENSPREG00000020951	POP1	91	43.442	ENSPMAG00000003209	POP1	99	43.717	Petromyzon_marinus
ENSPREG00000020951	POP1	100	45.894	ENSPCIG00000012216	POP1	100	45.894	Phascolarctos_cinereus
ENSPREG00000020951	POP1	100	95.426	ENSPFOG00000012490	POP1	100	95.426	Poecilia_formosa
ENSPREG00000020951	POP1	100	95.218	ENSPLAG00000004646	POP1	100	95.218	Poecilia_latipinna
ENSPREG00000020951	POP1	100	95.634	ENSPMEG00000019592	POP1	100	95.634	Poecilia_mexicana
ENSPREG00000020951	POP1	100	48.464	ENSPPYG00000018777	POP1	100	48.560	Pongo_abelii
ENSPREG00000020951	POP1	100	45.585	ENSPCAG00000016662	POP1	100	45.489	Procavia_capensis
ENSPREG00000020951	POP1	100	46.917	ENSPCOG00000019420	POP1	100	46.821	Propithecus_coquereli
ENSPREG00000020951	POP1	100	47.430	ENSPVAG00000014468	POP1	100	47.919	Pteropus_vampyrus
ENSPREG00000020951	POP1	100	66.429	ENSPNYG00000004476	pop1	100	65.851	Pundamilia_nyererei
ENSPREG00000020951	POP1	100	55.122	ENSPNAG00000000265	pop1	100	55.122	Pygocentrus_nattereri
ENSPREG00000020951	POP1	100	45.229	ENSRNOG00000005243	Pop1	100	45.733	Rattus_norvegicus
ENSPREG00000020951	POP1	100	48.464	ENSRBIG00000007996	POP1	100	48.752	Rhinopithecus_bieti
ENSPREG00000020951	POP1	100	48.752	ENSRROG00000012334	POP1	100	48.752	Rhinopithecus_roxellana
ENSPREG00000020951	POP1	99	48.062	ENSSBOG00000020830	POP1	100	48.256	Saimiri_boliviensis_boliviensis
ENSPREG00000020951	POP1	100	45.969	ENSSHAG00000000296	POP1	100	45.969	Sarcophilus_harrisii
ENSPREG00000020951	POP1	100	59.857	ENSSFOG00015007429	pop1	99	59.857	Scleropages_formosus
ENSPREG00000020951	POP1	100	68.066	ENSSMAG00000010467	POP1	100	68.270	Scophthalmus_maximus
ENSPREG00000020951	POP1	100	71.558	ENSSDUG00000007817	POP1	100	71.558	Seriola_dumerili
ENSPREG00000020951	POP1	100	71.759	ENSSLDG00000012565	POP1	100	71.759	Seriola_lalandi_dorsalis
ENSPREG00000020951	POP1	100	45.825	ENSSPUG00000003550	-	100	45.870	Sphenodon_punctatus
ENSPREG00000020951	POP1	100	70.438	ENSSPAG00000014955	pop1	100	69.929	Stegastes_partitus
ENSPREG00000020951	POP1	100	47.554	ENSSSCG00000006078	POP1	100	47.554	Sus_scrofa
ENSPREG00000020951	POP1	93	44.491	ENSTGUG00000012011	-	100	44.596	Taeniopygia_guttata
ENSPREG00000020951	POP1	100	66.258	ENSTRUG00000010856	pop1	100	66.258	Takifugu_rubripes
ENSPREG00000020951	POP1	95	67.678	ENSTNIG00000013297	pop1	100	67.678	Tetraodon_nigroviridis
ENSPREG00000020951	POP1	93	47.208	ENSTBEG00000014214	POP1	96	47.208	Tupaia_belangeri
ENSPREG00000020951	POP1	100	46.339	ENSTTRG00000016071	POP1	100	46.615	Tursiops_truncatus
ENSPREG00000020951	POP1	99	48.461	ENSUAMG00000017309	POP1	100	48.467	Ursus_americanus
ENSPREG00000020951	POP1	100	47.564	ENSUMAG00000016952	POP1	100	51.128	Ursus_maritimus
ENSPREG00000020951	POP1	85	52.555	ENSVPAG00000008278	POP1	81	52.555	Vicugna_pacos
ENSPREG00000020951	POP1	100	48.346	ENSVVUG00000010994	POP1	100	48.346	Vulpes_vulpes
ENSPREG00000020951	POP1	100	79.654	ENSXCOG00000017043	POP1	100	78.942	Xiphophorus_couchianus
ENSPREG00000020951	POP1	100	91.060	ENSXMAG00000002472	POP1	100	91.060	Xiphophorus_maculatus