EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000020957 (Gene tree)
Gene ID: 103482011
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 13290 bases
Position: chrLG19:23515032-23528321
Accession: 103482011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000030954	SAP	PF02037.27	2.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000031306	-	1968	XM_008437899	ENSPREP00000030954	655 (aa)	XP_008436121	UPI0004A29DA2

Gene Model

Click here to download ENSPREG00000020957's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000020957's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000020957	xrcc6	93	55.375	ENSG00000196419	XRCC6	99	55.537	Homo_sapiens
ENSPREG00000020957	xrcc6	93	85.270	ENSAPOG00000012704	xrcc6	100	85.270	Acanthochromis_polyacanthus
ENSPREG00000020957	xrcc6	93	84.804	ENSACIG00000021277	xrcc6	100	84.804	Amphilophus_citrinellus
ENSPREG00000020957	xrcc6	93	85.131	ENSAOCG00000021344	xrcc6	100	85.131	Amphiprion_ocellaris
ENSPREG00000020957	xrcc6	93	85.294	ENSAPEG00000020712	xrcc6	100	85.294	Amphiprion_percula
ENSPREG00000020957	xrcc6	93	84.314	ENSATEG00000007119	xrcc6	100	84.314	Anabas_testudineus
ENSPREG00000020957	xrcc6	84	60.474	ENSAPLG00000004469	XRCC6	98	60.474	Anas_platyrhynchos
ENSPREG00000020957	xrcc6	93	48.860	ENSANAG00000035230	-	99	48.697	Aotus_nancymaae
ENSPREG00000020957	xrcc6	93	46.504	ENSANAG00000023445	-	99	46.504	Aotus_nancymaae
ENSPREG00000020957	xrcc6	93	55.212	ENSANAG00000018684	XRCC6	98	56.364	Aotus_nancymaae
ENSPREG00000020957	xrcc6	93	48.773	ENSANAG00000020017	-	99	48.773	Aotus_nancymaae
ENSPREG00000020957	xrcc6	93	85.621	ENSACLG00000018608	xrcc6	100	85.621	Astatotilapia_calliptera
ENSPREG00000020957	xrcc6	93	76.721	ENSAMXG00000007545	xrcc6	99	76.721	Astyanax_mexicanus
ENSPREG00000020957	xrcc6	93	55.212	ENSCJAG00000045512	XRCC6	99	55.212	Callithrix_jacchus
ENSPREG00000020957	xrcc6	93	55.700	ENSTSYG00000011348	XRCC6	99	55.700	Carlito_syrichta
ENSPREG00000020957	xrcc6	87	53.543	ENSCCAG00000030468	-	99	53.543	Cebus_capucinus
ENSPREG00000020957	xrcc6	93	51.792	ENSCCAG00000030041	-	95	51.792	Cebus_capucinus
ENSPREG00000020957	xrcc6	93	44.992	ENSCCAG00000035711	-	99	44.828	Cebus_capucinus
ENSPREG00000020957	xrcc6	93	46.809	ENSCCAG00000037663	-	97	46.809	Cebus_capucinus
ENSPREG00000020957	xrcc6	93	55.537	ENSCATG00000042366	XRCC6	98	56.706	Cercocebus_atys
ENSPREG00000020957	xrcc6	93	55.954	ENSCLAG00000016669	XRCC6	99	56.117	Chinchilla_lanigera
ENSPREG00000020957	xrcc6	93	55.537	ENSCSAG00000005784	XRCC6	99	55.700	Chlorocebus_sabaeus
ENSPREG00000020957	xrcc6	93	59.641	ENSCPBG00000020535	XRCC6	99	59.641	Chrysemys_picta_bellii
ENSPREG00000020957	xrcc6	91	34.775	ENSCING00000000633	-	95	34.536	Ciona_intestinalis
ENSPREG00000020957	xrcc6	93	55.537	ENSCANG00000031032	XRCC6	99	55.700	Colobus_angolensis_palliatus
ENSPREG00000020957	xrcc6	93	52.053	ENSCGRG00001019029	Xrcc6	99	52.053	Cricetulus_griseus_chok1gshd
ENSPREG00000020957	xrcc6	93	56.536	ENSCGRG00000001528	Xrcc6	99	56.814	Cricetulus_griseus_crigri
ENSPREG00000020957	xrcc6	95	78.905	ENSCSEG00000020434	xrcc6	100	79.412	Cynoglossus_semilaevis
ENSPREG00000020957	xrcc6	94	88.254	ENSCVAG00000002189	xrcc6	100	88.399	Cyprinodon_variegatus
ENSPREG00000020957	xrcc6	93	74.098	ENSDARG00000071551	xrcc6	99	74.754	Danio_rerio
ENSPREG00000020957	xrcc6	73	53.511	ENSETEG00000015333	-	77	53.511	Echinops_telfairi
ENSPREG00000020957	xrcc6	93	55.139	ENSEASG00005001514	XRCC6	99	55.791	Equus_asinus_asinus
ENSPREG00000020957	xrcc6	93	55.212	ENSECAG00000017563	XRCC6	99	55.732	Equus_caballus
ENSPREG00000020957	xrcc6	93	74.020	ENSELUG00000020301	xrcc6	100	74.020	Esox_lucius
ENSPREG00000020957	xrcc6	93	58.833	ENSFALG00000011908	XRCC6	97	58.995	Ficedula_albicollis
ENSPREG00000020957	xrcc6	93	91.176	ENSFHEG00000016833	xrcc6	100	91.176	Fundulus_heteroclitus
ENSPREG00000020957	xrcc6	93	67.532	ENSGMOG00000013524	xrcc6	100	67.532	Gadus_morhua
ENSPREG00000020957	xrcc6	93	57.955	ENSGALG00000011932	XRCC6	99	58.117	Gallus_gallus
ENSPREG00000020957	xrcc6	93	93.301	ENSGAFG00000008130	xrcc6	100	93.301	Gambusia_affinis
ENSPREG00000020957	xrcc6	94	82.039	ENSGACG00000004868	xrcc6	99	82.039	Gasterosteus_aculeatus
ENSPREG00000020957	xrcc6	93	59.477	ENSGAGG00000017518	XRCC6	99	59.477	Gopherus_agassizii
ENSPREG00000020957	xrcc6	93	55.375	ENSGGOG00000015885	XRCC6	96	58.696	Gorilla_gorilla
ENSPREG00000020957	xrcc6	87	85.739	ENSHBUG00000023281	xrcc6	100	85.739	Haplochromis_burtoni
ENSPREG00000020957	xrcc6	93	55.882	ENSHGLG00000018078	XRCC6	99	55.556	Heterocephalus_glaber_female
ENSPREG00000020957	xrcc6	93	55.882	ENSHGLG00100011264	XRCC6	99	55.556	Heterocephalus_glaber_male
ENSPREG00000020957	xrcc6	93	77.941	ENSHCOG00000009821	xrcc6	100	77.941	Hippocampus_comes
ENSPREG00000020957	xrcc6	93	75.614	ENSIPUG00000000767	xrcc6	99	75.614	Ictalurus_punctatus
ENSPREG00000020957	xrcc6	93	55.628	ENSSTOG00000009490	XRCC6	99	55.954	Ictidomys_tridecemlineatus
ENSPREG00000020957	xrcc6	93	52.459	ENSJJAG00000017136	Xrcc6	99	53.431	Jaculus_jaculus
ENSPREG00000020957	xrcc6	93	87.889	ENSKMAG00000002141	xrcc6	99	87.889	Kryptolebias_marmoratus
ENSPREG00000020957	xrcc6	93	84.262	ENSLBEG00000002691	xrcc6	99	84.262	Labrus_bergylta
ENSPREG00000020957	xrcc6	81	63.107	ENSLOCG00000011533	xrcc6	99	63.107	Lepisosteus_oculatus
ENSPREG00000020957	xrcc6	93	55.537	ENSMFAG00000003352	XRCC6	99	55.700	Macaca_fascicularis
ENSPREG00000020957	xrcc6	93	55.537	ENSMMUG00000001856	XRCC6	99	55.700	Macaca_mulatta
ENSPREG00000020957	xrcc6	93	55.537	ENSMNEG00000035076	XRCC6	99	55.700	Macaca_nemestrina
ENSPREG00000020957	xrcc6	93	55.537	ENSMLEG00000019869	XRCC6	99	55.700	Mandrillus_leucophaeus
ENSPREG00000020957	xrcc6	93	83.497	ENSMAMG00000003368	xrcc6	100	83.497	Mastacembelus_armatus
ENSPREG00000020957	xrcc6	90	82.993	ENSMAMG00000003405	xrcc6	97	82.993	Mastacembelus_armatus
ENSPREG00000020957	xrcc6	93	85.458	ENSMZEG00005028080	xrcc6	100	85.458	Maylandia_zebra
ENSPREG00000020957	xrcc6	93	57.997	ENSMGAG00000012146	XRCC6	99	58.158	Meleagris_gallopavo
ENSPREG00000020957	xrcc6	93	56.863	ENSMAUG00000017340	Xrcc6	99	57.143	Mesocricetus_auratus
ENSPREG00000020957	xrcc6	93	56.322	ENSMOCG00000015717	Xrcc6	99	56.486	Microtus_ochrogaster
ENSPREG00000020957	xrcc6	93	81.046	ENSMMOG00000003536	xrcc6	99	81.046	Mola_mola
ENSPREG00000020957	xrcc6	93	84.314	ENSMALG00000013912	xrcc6	95	84.314	Monopterus_albus
ENSPREG00000020957	xrcc6	93	53.268	MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.268	Mus_caroli
ENSPREG00000020957	xrcc6	93	57.680	ENSMUSG00000022471	Xrcc6	99	60.000	Mus_musculus
ENSPREG00000020957	xrcc6	93	57.516	MGP_PahariEiJ_G0020069	Xrcc6	99	57.516	Mus_pahari
ENSPREG00000020957	xrcc6	89	58.532	MGP_SPRETEiJ_G0020967	Xrcc6	99	58.532	Mus_spretus
ENSPREG00000020957	xrcc6	93	56.814	ENSNGAG00000013750	Xrcc6	99	56.814	Nannospalax_galili
ENSPREG00000020957	xrcc6	93	85.621	ENSNBRG00000004125	xrcc6	100	85.621	Neolamprologus_brichardi
ENSPREG00000020957	xrcc6	89	58.319	ENSOPRG00000002386	XRCC6	99	58.319	Ochotona_princeps
ENSPREG00000020957	xrcc6	93	56.281	ENSODEG00000015847	XRCC6	99	55.954	Octodon_degus
ENSPREG00000020957	xrcc6	94	83.981	ENSONIG00000019715	xrcc6	100	84.967	Oreochromis_niloticus
ENSPREG00000020957	xrcc6	64	59.472	ENSOANG00000011328	XRCC6	99	59.472	Ornithorhynchus_anatinus
ENSPREG00000020957	xrcc6	93	56.721	ENSOCUG00000006948	XRCC6	99	57.049	Oryctolagus_cuniculus
ENSPREG00000020957	xrcc6	93	83.170	ENSORLG00020007820	xrcc6	100	83.170	Oryzias_latipes_hni
ENSPREG00000020957	xrcc6	93	82.843	ENSORLG00015006406	xrcc6	100	82.843	Oryzias_latipes_hsok
ENSPREG00000020957	xrcc6	93	82.353	ENSOMEG00000008998	xrcc6	100	82.353	Oryzias_melastigma
ENSPREG00000020957	xrcc6	93	55.465	ENSOGAG00000008821	XRCC6	99	55.628	Otolemur_garnettii
ENSPREG00000020957	xrcc6	86	55.914	ENSPPAG00000037167	XRCC6	99	55.914	Pan_paniscus
ENSPREG00000020957	xrcc6	93	55.375	ENSPTRG00000045824	XRCC6	99	56.559	Pan_troglodytes
ENSPREG00000020957	xrcc6	93	55.375	ENSPTRG00000022548	XRCC6	99	56.559	Pan_troglodytes
ENSPREG00000020957	xrcc6	93	55.700	ENSPANG00000001252	XRCC6	99	58.547	Papio_anubis
ENSPREG00000020957	xrcc6	93	71.475	ENSPKIG00000003974	xrcc6	99	71.475	Paramormyrops_kingsleyae
ENSPREG00000020957	xrcc6	92	79.470	ENSPMGG00000014220	xrcc6	100	79.636	Periophthalmus_magnuspinnatus
ENSPREG00000020957	xrcc6	93	56.158	ENSPEMG00000023446	Xrcc6	99	56.158	Peromyscus_maniculatus_bairdii
ENSPREG00000020957	xrcc6	93	56.607	ENSPCIG00000026409	XRCC6	99	56.607	Phascolarctos_cinereus
ENSPREG00000020957	xrcc6	93	96.732	ENSPFOG00000017173	xrcc6	100	96.732	Poecilia_formosa
ENSPREG00000020957	xrcc6	93	96.405	ENSPLAG00000000562	xrcc6	100	96.405	Poecilia_latipinna
ENSPREG00000020957	xrcc6	93	96.405	ENSPMEG00000018478	xrcc6	100	96.405	Poecilia_mexicana
ENSPREG00000020957	xrcc6	93	49.186	ENSPPYG00000011876	XRCC6	99	49.349	Pongo_abelii
ENSPREG00000020957	xrcc6	93	55.719	ENSPVAG00000001168	XRCC6	99	55.392	Pteropus_vampyrus
ENSPREG00000020957	xrcc6	95	84.839	ENSPNYG00000003815	xrcc6	100	81.337	Pundamilia_nyererei
ENSPREG00000020957	xrcc6	93	56.863	ENSRNOG00000006392	Xrcc6	99	57.026	Rattus_norvegicus
ENSPREG00000020957	xrcc6	93	51.303	ENSRBIG00000039794	XRCC6	99	52.991	Rhinopithecus_bieti
ENSPREG00000020957	xrcc6	93	55.537	ENSRROG00000030297	XRCC6	99	55.700	Rhinopithecus_roxellana
ENSPREG00000020957	xrcc6	63	50.608	ENSSBOG00000024724	-	99	50.608	Saimiri_boliviensis_boliviensis
ENSPREG00000020957	xrcc6	93	56.026	ENSSHAG00000010790	XRCC6	99	56.026	Sarcophilus_harrisii
ENSPREG00000020957	xrcc6	93	73.607	ENSSFOG00015014409	xrcc6	99	73.607	Scleropages_formosus
ENSPREG00000020957	xrcc6	93	85.294	ENSSMAG00000006496	xrcc6	100	85.294	Scophthalmus_maximus
ENSPREG00000020957	xrcc6	93	85.621	ENSSDUG00000007542	xrcc6	100	85.621	Seriola_dumerili
ENSPREG00000020957	xrcc6	93	85.294	ENSSLDG00000009974	xrcc6	100	85.294	Seriola_lalandi_dorsalis
ENSPREG00000020957	xrcc6	93	57.655	ENSSPUG00000012086	XRCC6	99	57.818	Sphenodon_punctatus
ENSPREG00000020957	xrcc6	93	86.275	ENSSPAG00000015199	xrcc6	100	86.275	Stegastes_partitus
ENSPREG00000020957	xrcc6	89	60.239	ENSTGUG00000009852	-	95	60.068	Taeniopygia_guttata
ENSPREG00000020957	xrcc6	93	77.250	ENSTRUG00000017070	xrcc6	99	78.069	Takifugu_rubripes
ENSPREG00000020957	xrcc6	90	77.234	ENSTNIG00000012947	xrcc6	99	77.234	Tetraodon_nigroviridis
ENSPREG00000020957	xrcc6	89	52.218	ENSTBEG00000011736	XRCC6	99	52.218	Tupaia_belangeri
ENSPREG00000020957	xrcc6	84	52.025	ENSTTRG00000006749	XRCC6	90	52.960	Tursiops_truncatus
ENSPREG00000020957	xrcc6	93	95.588	ENSXMAG00000009691	xrcc6	100	95.588	Xiphophorus_maculatus